RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 NOP53Q9NZM5 478 aaKnown RBP25.01■■□□□ 1.59
SSU72-201ENST00000291386 ABI3Q9P2A4 366 aa25.01■■□□□ 1.59
SSU72-201ENST00000291386 MARCOQ9UEW3 520 aaPredicted RBP25.01■■□□□ 1.59
SSU72-201ENST00000291386 ANAPC2Q9UJX6 822 aa25.01■■□□□ 1.59
SSU72-201ENST00000291386 ERVK-19Q9WJR5 959 aa25.01■■□□□ 1.59
SSU72-201ENST00000291386 TMEM200CA6NKL6 621 aa25■■□□□ 1.59
SSU72-201ENST00000291386 HRKO00198 91 aa25■■□□□ 1.59
SSU72-201ENST00000291386 SDHDO14521 159 aa25■■□□□ 1.59
SSU72-201ENST00000291386 PRKNO60260 465 aaPredicted RBP25■■□□□ 1.59
SSU72-201ENST00000291386 CLPSP04118 112 aa25■■□□□ 1.59
SSU72-201ENST00000291386 CT62P0C5K7 136 aa25■■□□□ 1.59
SSU72-201ENST00000291386 KITP10721 976 aa25■■□□□ 1.59
SSU72-201ENST00000291386 NT5EP21589 574 aa25■■□□□ 1.59
SSU72-201ENST00000291386 RNF4P78317 190 aa25■■□□□ 1.59
SSU72-201ENST00000291386 FCRLBQ6BAA4 426 aa25■■□□□ 1.59
SSU72-201ENST00000291386 OGFOD2Q6N063 350 aa25■■□□□ 1.59
SSU72-201ENST00000291386 FAM180BQ6P0A1 224 aa25■■□□□ 1.59
SSU72-201ENST00000291386 PTRH1Q86Y79 214 aaKnown RBP25■■□□□ 1.59
SSU72-201ENST00000291386 OR5L2Q8NGL0 311 aa25■■□□□ 1.59
SSU72-201ENST00000291386 MAELQ96JY0 434 aaKnown RBP25■■□□□ 1.59
SSU72-201ENST00000291386 CNPPD1Q9BV87 410 aa25■■□□□ 1.59
SSU72-201ENST00000291386 MAT2BQ9NZL9 334 aa25■■□□□ 1.59
SSU72-201ENST00000291386 ZNF639Q9UID6 485 aa25■■□□□ 1.59
SSU72-201ENST00000291386 CNTRLQ7Z7A1 2325 aa25■■□□□ 1.59
SSU72-201ENST00000291386 SPTA1P02549 2419 aa25■■□□□ 1.59
SSU72-201ENST00000291386 DYTNA2CJ06 578 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 OR6C76A6NM76 312 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 ZNF195O14628 629 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 MAN1A2O60476 641 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 WDPCPO95876 746 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 LBPP18428 481 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 S1PR1P21453 382 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 MPIP34949 423 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 SOX18P35713 384 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 RPL3P39023 403 aaKnown RBP24.99■■□□□ 1.59
SSU72-201ENST00000291386 SLC37A1P57057 533 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 C6orf163Q5TEZ5 329 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 R3HCC1LQ7Z5L2 792 aaKnown RBP24.99■■□□□ 1.59
SSU72-201ENST00000291386 CCDC116Q8IYX3 515 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 BEST3Q8N1M1 668 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 OR7G1Q8NGA0 311 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 SUN3Q8TAQ9 357 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 NUBPLQ8TB37 319 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 PNPLA2Q96AD5 504 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 ERP27Q96DN0 273 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 SLCO1B3Q9NPD5 702 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 ATP6V1HQ9UI12 483 aa24.99■■□□□ 1.59
SSU72-201ENST00000291386 PCSK2P16519 638 aa24.98■■□□□ 1.59
SSU72-201ENST00000291386 C21orf58P58505 322 aa24.98■■□□□ 1.59
SSU72-201ENST00000291386 ARG2P78540 354 aa24.98■■□□□ 1.59
SSU72-201ENST00000291386 ZNF628Q5EBL2 1059 aa24.98■■□□□ 1.59
SSU72-201ENST00000291386 RNF111Q6ZNA4 994 aa24.98■■□□□ 1.59
SSU72-201ENST00000291386 VWA5B2Q8N398 1253 aa24.98■■□□□ 1.59
SSU72-201ENST00000291386 CLHC1Q8NHS4 586 aa24.98■■□□□ 1.59
SSU72-201ENST00000291386 GFM2Q969S9 779 aaKnown RBP24.98■■□□□ 1.59
SSU72-201ENST00000291386 TRIM45Q9H8W5 580 aaPredicted RBP24.98■■□□□ 1.59
SSU72-201ENST00000291386 RYDENQ9NUL5 291 aaKnown RBP24.98■■□□□ 1.59
SSU72-201ENST00000291386 MYOTQ9UBF9 498 aa24.98■■□□□ 1.59
SSU72-201ENST00000291386 B3GNT3Q9Y2A9 372 aa24.98■■□□□ 1.59
SSU72-201ENST00000291386 SMG1Q96Q15 3661 aaKnown RBP24.98■■□□□ 1.59
SSU72-201ENST00000291386 OR5H15A6NDH6 313 aa24.97■■□□□ 1.59
SSU72-201ENST00000291386 B8ZZF3 427 aa24.97■■□□□ 1.59
SSU72-201ENST00000291386 FCHO1O14526 889 aa24.97■■□□□ 1.59
SSU72-201ENST00000291386 SLITRK5O94991 958 aa24.97■■□□□ 1.59
SSU72-201ENST00000291386 G6PDP11413 515 aa24.97■■□□□ 1.59
SSU72-201ENST00000291386 DDX5P17844 614 aaKnown RBP24.97■■□□□ 1.59
SSU72-201ENST00000291386 TRHRP34981 398 aaPredicted RBP24.97■■□□□ 1.59
SSU72-201ENST00000291386 PTGR1Q14914 329 aa24.97■■□□□ 1.59
SSU72-201ENST00000291386 NADK2Q4G0N4 442 aa24.97■■□□□ 1.59
SSU72-201ENST00000291386 SLC6A19Q695T7 634 aa24.97■■□□□ 1.59
SSU72-201ENST00000291386 MAVSQ7Z434 540 aa24.97■■□□□ 1.59
SSU72-201ENST00000291386 C9orf40Q8IXQ3 194 aa24.97■■□□□ 1.59
SSU72-201ENST00000291386 ZNF615Q8N8J6 731 aa24.97■■□□□ 1.59
SSU72-201ENST00000291386 DOK4Q8TEW6 326 aa24.97■■□□□ 1.59
SSU72-201ENST00000291386 BBS4Q96RK4 519 aa24.97■■□□□ 1.59
SSU72-201ENST00000291386 PLA2G3Q9NZ20 509 aa24.97■■□□□ 1.59
SSU72-201ENST00000291386 YARS2Q9Y2Z4 477 aaKnown RBP24.97■■□□□ 1.59
SSU72-201ENST00000291386 CSAG2Q9Y5P2 127 aa24.97■■□□□ 1.59
SSU72-201ENST00000291386 BOD1L1Q8NFC6 3051 aa24.97■■□□□ 1.59
SSU72-201ENST00000291386 GABRR3A8MPY1 467 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 DYNC1I1O14576 645 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 SCAMP2O15127 329 aaKnown RBP24.96■■□□□ 1.59
SSU72-201ENST00000291386 AKAP10O43572 662 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 LRATO95237 230 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 IFI6P09912 130 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 PRPS1L1P21108 318 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 SSTR4P31391 388 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 FRKP42685 505 aaPredicted RBP24.96■■□□□ 1.59
SSU72-201ENST00000291386 TNFSF10P50591 281 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 CLDN8P56748 225 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 TLR1Q15399 786 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 FAM111BQ6SJ93 734 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 RIMKLAQ8IXN7 391 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 FAM9CQ8IZT9 166 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 PPCDCQ96CD2 204 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 BRINP2Q9C0B6 783 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 OR10A5Q9H207 317 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 MAPRE3Q9UPY8 281 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 USH1CQ9Y6N9 552 aa24.96■■□□□ 1.59
SSU72-201ENST00000291386 KALRNO60229 2985 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms