RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 HLA-DQA2P01906 255 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 MBP02144 154 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 MBPP02686 304 aaPredicted RBP4.27□□□□□ -1.73
CD44-202ENST00000278385 CA3P07451 260 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 MMP3P08254 477 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 PLEKP08567 350 aaPredicted RBP4.27□□□□□ -1.73
CD44-202ENST00000278385 CPA3P15088 417 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 UGT1A1P22309 533 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 DUSP1P28562 367 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 LCN1P31025 176 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 CYP2C18P33260 490 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 FDFT1P37268 417 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 PLA2G5P39877 138 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 NAMPTP43490 491 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 NUMBP49757 651 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 RARRES1P49788 294 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 RAB9AP51151 201 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 BCAP31P51572 246 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 CCR4P51679 360 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 MTCP1P56278 107 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 TSPAN5P62079 268 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 FOXI1Q12951 378 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 GPR176Q14439 515 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 PTGISQ16647 500 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 PNLIPRP3Q17RR3 467 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 HKDC1Q2TB90 917 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 CCDC14Q49A88 953 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 PCID2Q5JVF3 399 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 LCN1P1Q5VSP4 162 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 AGAP6Q5VW22 663 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 RAET1LQ5VY80 246 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 HIST2H2BCQ6DN03 193 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 HIST2H2BDQ6DRA6 164 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 TRIM65Q6PJ69 517 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 FIGLAQ6QHK4 219 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 IRF2BP2Q7Z5L9 587 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 VPS36Q86VN1 386 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 ZC3HC1Q86WB0 502 aaKnown RBP4.27□□□□□ -1.73
CD44-202ENST00000278385 LRRC6Q86X45 466 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 MEX3DQ86XN8 651 aaKnown RBP4.27□□□□□ -1.73
CD44-202ENST00000278385 FBXL16Q8N461 479 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 EXD3Q8N9H8 876 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 BOLLQ8N9W6 283 aaKnown RBP4.27□□□□□ -1.73
CD44-202ENST00000278385 SIDT2Q8NBJ9 832 aaKnown RBP4.27□□□□□ -1.73
CD44-202ENST00000278385 MCPH1Q8NEM0 835 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 OR5D13Q8NGL4 314 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 PPTC7Q8NI37 304 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 ZNF596Q8TC21 504 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 LRRC20Q8TCA0 184 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 PNPT1Q8TCS8 783 aaKnown RBP4.27□□□□□ -1.73
CD44-202ENST00000278385 GPX8Q8TED1 209 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 TNFRSF14Q92956 283 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 MOB3AQ96BX8 217 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 COQ2Q96H96 371 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 LURAP1Q96LR2 239 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 SIGLEC11Q96RL6 698 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 HAUS8Q9BT25 410 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 MSTO1Q9BUK6 570 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 PIGMQ9H3S5 423 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 MAN2C1Q9NTJ4 1040 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 ABHD10Q9NUJ1 306 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 MRPL22Q9NWU5 206 aaKnown RBP4.27□□□□□ -1.73
CD44-202ENST00000278385 SMARCAL1Q9NZC9 954 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 TBC1D24Q9ULP9 559 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 FOXJ3Q9UPW0 622 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 RNF24Q9Y225 148 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 NCKAP1Q9Y2A7 1128 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 OR10H1Q9Y4A9 318 aa4.27□□□□□ -1.73
CD44-202ENST00000278385 FRMPD4Q14CM0 1322 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 ANKUB1A6NFN9 424 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 CD8B2A6NJW9 211 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 NR5A2O00482 541 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 PDXKO00764 312 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 ARPC3O15145 178 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 TLX3O43711 291 aaPredicted RBP4.26□□□□□ -1.73
CD44-202ENST00000278385 ACSL4O60488 711 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 BCAS1O75363 584 aaPredicted RBP4.26□□□□□ -1.73
CD44-202ENST00000278385 UPK3AO75631 287 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 PLEKHA8P1O95397 391 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 PROS1P07225 676 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 CSN3P07498 182 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 NR2F6P10588 404 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 GPD1P21695 349 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 NMBRP28336 390 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 PRDX2P32119 198 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 SLC8A1P32418 973 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 HSD17B3P37058 310 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 PTGFRP43088 359 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 OR3A1P47881 315 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 LHX1P48742 406 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 SLC26A2P50443 739 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 CCNG1P51959 295 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 CCL23P55773 120 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 C21orf59P57076 290 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 CSNK2A1P68400 391 aaPredicted RBP4.26□□□□□ -1.73
CD44-202ENST00000278385 RAE1P78406 368 aaKnown RBP4.26□□□□□ -1.73
CD44-202ENST00000278385 CDK3Q00526 305 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 SORDQ00796 357 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 KDSRQ06136 332 aa4.26□□□□□ -1.73
CD44-202ENST00000278385 PMPCAQ10713 525 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms