RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 PPP2R3BQ9Y5P8 575 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 NUBP2Q9Y5Y2 271 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 A0A1W2PRQ8 180 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 LCMT2O60294 686 aaKnown RBP8.77□□□□□ -1.01
PDGFC-201ENST00000274071 SERPINA3P01011 423 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 FABP3P05413 133 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 ZNF44P15621 663 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 NOS2P35228 1153 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 ASMTP46597 345 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 SRP9P49458 86 aaKnown RBP8.77□□□□□ -1.01
PDGFC-201ENST00000274071 KCNJ10P78508 379 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 MELKQ14680 651 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 AARDQ4LEZ3 155 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 CCDC157Q569K6 752 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 FBXO48Q5FWF7 155 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 SEZ6L2Q6UXD5 910 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 DLK2Q6UY11 383 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 DPH6Q7L8W6 267 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 VTCN1Q7Z7D3 282 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 TMEM17Q86X19 198 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 NAGSQ8N159 534 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 SH3RF2Q8TEC5 729 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 KCTD7Q96MP8 289 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 ZNF599Q96NL3 588 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 DPAGT1Q9H3H5 408 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 NSUN3Q9H649 340 aaKnown RBP8.77□□□□□ -1.01
PDGFC-201ENST00000274071 BEX1Q9HBH7 125 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 CRLF2Q9HC73 371 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 ATP13A1Q9HD20 1204 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 C1orf109Q9NX04 203 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 SLC2A6Q9UGQ3 507 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 STYXL1Q9Y6J8 313 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 OTOFQ9HC10 1997 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 TRBV23OR9-2A0A075B6M9 112 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 LOC285095A0A1B0GVY8 99 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 DPYSL4O14531 572 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 PRRG1O14668 218 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 FPGTO14772 594 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 GATBO75879 557 aaKnown RBP8.76□□□□□ -1.01
PDGFC-201ENST00000274071 DDNO94850 711 aaPredicted RBP8.76□□□□□ -1.01
PDGFC-201ENST00000274071 TFP02787 698 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 ESR1P03372 595 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 NUDT7P0C024 238 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 TIMP2P16035 220 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 NPR2P20594 1047 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 TLE2Q04725 743 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 CACNB2Q08289 660 aaPredicted RBP8.76□□□□□ -1.01
PDGFC-201ENST00000274071 ZNF660Q6AZW8 331 aaPredicted RBP8.76□□□□□ -1.01
PDGFC-201ENST00000274071 FGD2Q7Z6J4 655 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 TGIF2LXQ8IUE1 241 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 C4orf19Q8IY42 314 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 PLA2G15Q8NCC3 412 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 CENPIQ92674 756 aaPredicted RBP8.76□□□□□ -1.01
PDGFC-201ENST00000274071 KAT2AQ92830 837 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 FEVQ99581 238 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 C7orf50Q9BRJ6 194 aaKnown RBP8.76□□□□□ -1.01
PDGFC-201ENST00000274071 NTMT1Q9BV86 223 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 JAM3Q9BX67 310 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 TMEM184CQ9NVA4 438 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 TMEM45AQ9NWC5 275 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 FKBPLQ9UIM3 349 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 CA14Q9ULX7 337 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 DUSP12Q9UNI6 340 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 PHIPQ8WWQ0 1821 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 A0A1W2PPE3 182 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 PPM1DO15297 605 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 SUSD5O60279 629 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 C22orf31O95567 290 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 MTHFD2P13995 350 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 GIFP27352 417 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 SFNP31947 248 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 GZMMP51124 257 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 STARD6P59095 220 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 RAB4BP61018 213 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 LCP2Q13094 533 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 KIAA0040Q15053 153 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 ZSWIM7Q19AV6 140 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 ZCCHC12Q6PEW1 402 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 Q6ZSR9 355 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 OR10K1Q8NGX5 313 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 RNASE11Q8TAA1 199 aaKnown RBP8.76□□□□□ -1.01
PDGFC-201ENST00000274071 MISP3Q96FF7 219 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 NELL2Q99435 816 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 FN3KQ9H479 309 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 KCNK12Q9HB15 430 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 SLC6A13Q9NSD5 602 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 METTL1Q9UBP6 276 aaKnown RBP8.76□□□□□ -1.01
PDGFC-201ENST00000274071 SAMD4AQ9UPU9 718 aaKnown RBP8.76□□□□□ -1.01
PDGFC-201ENST00000274071 YARS2Q9Y2Z4 477 aaKnown RBP8.76□□□□□ -1.01
PDGFC-201ENST00000274071 SSC5DA1L4H1 1573 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 HAS3O00219 553 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 LRRTM2O43300 516 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 OIP5O43482 229 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 AHCYP23526 432 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 RGS4P49798 205 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 AP1S1P61966 158 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 SKP2Q13309 424 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 TSNQ15631 228 aaKnown RBP8.76□□□□□ -1.01
PDGFC-201ENST00000274071 MAPKAPK3Q16644 382 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 SV2CQ496J9 727 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms