RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 NUDT13Q86X67 352 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 FAM109AQ8N4B1 249 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 RPRMLQ8N4K4 120 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 TMEM151AQ8N4L1 468 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 TMEM251Q8N6I4 163 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 LILRB4Q8NHJ6 448 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 SLC22A8Q8TCC7 542 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 PAQR8Q8TEZ7 354 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 IFT81Q8WYA0 676 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 RND1Q92730 232 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 ATP6V1E2Q96A05 226 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 SPACA9Q96E40 222 aaPredicted RBP8.97□□□□□ -0.97
VPS41-201ENST00000265745 NSUN5Q96P11 429 aaKnown RBP8.97□□□□□ -0.97
VPS41-201ENST00000265745 FRG2BQ96QU4 278 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 PAFAH2Q99487 392 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 SERPINI1Q99574 410 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 TREX2Q9BQ50 279 aaPredicted RBP8.97□□□□□ -0.97
VPS41-201ENST00000265745 PELOQ9BRX2 385 aaKnown RBP8.97□□□□□ -0.97
VPS41-201ENST00000265745 CNPPD1Q9BV87 410 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 ERVK-6Q9BXR3 956 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 ENKD1Q9H0I2 346 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 PROK2Q9HC23 129 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 ZBTB26Q9HCK0 441 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 SEMA4BQ9NPR2 832 aaPredicted RBP8.97□□□□□ -0.97
VPS41-201ENST00000265745 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.97□□□□□ -0.97
VPS41-201ENST00000265745 TUBA8Q9NY65 449 aaPredicted RBP8.97□□□□□ -0.97
VPS41-201ENST00000265745 COQ3Q9NZJ6 369 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 ZNF180Q9UJW8 692 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 PCTPQ9UKL6 214 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 TMCO1Q9UM00 188 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 ERVK-19Q9WJR5 959 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 ATP6AP2A0A1C7CYW4 349 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 PPP6CO00743 305 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 SUSD5O60279 629 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 ATP6AP2O75787 350 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 KRT38O76015 456 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 CLPSP04118 112 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 RPLP1P05386 114 aaKnown RBP8.96□□□□□ -0.98
VPS41-201ENST00000265745 KLK1P06870 262 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 CELA3AP09093 270 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 ELAVL4P26378 380 aaKnown RBP8.96□□□□□ -0.98
VPS41-201ENST00000265745 CNTFP26441 200 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 SERPINB3P29508 390 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 SSTR2P30874 369 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 CCNG1P51959 295 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 SLC37A1P57057 533 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 TBL3Q12788 808 aaKnown RBP8.96□□□□□ -0.98
VPS41-201ENST00000265745 TRAF3Q13114 568 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 EBPQ15125 230 aaKnown RBP8.96□□□□□ -0.98
VPS41-201ENST00000265745 GLE1Q53GS7 698 aaKnown RBP8.96□□□□□ -0.98
VPS41-201ENST00000265745 RNF111Q6ZNA4 994 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 ACAD11Q709F0 780 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 SLC29A4Q7RTT9 530 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 MILR1Q7Z6M3 343 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 ZNF441Q8N8Z8 693 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 MNS1Q8NEH6 495 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 DCAKDQ8WVC6 231 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 ASB5Q8WWX0 329 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 LURAP1Q96LR2 239 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 SMC6Q96SB8 1091 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 FMO2Q99518 471 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 MRPL57Q9BQC6 102 aaKnown RBP8.96□□□□□ -0.98
VPS41-201ENST00000265745 WWTR1Q9GZV5 400 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 WDR41Q9HAD4 459 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 CXorf21Q9HAI6 301 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 PNPLA3Q9NST1 481 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 TEX10Q9NXF1 929 aaPredicted RBP8.96□□□□□ -0.98
VPS41-201ENST00000265745 XPR1Q9UBH6 696 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 ADAM29Q9UKF5 820 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 RNF6Q9Y252 685 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 LIPGQ9Y5X9 500 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 CHCHD2Q9Y6H1 151 aaPredicted RBP8.96□□□□□ -0.98
VPS41-201ENST00000265745 IKBKGQ9Y6K9 419 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.96□□□□□ -0.98
VPS41-201ENST00000265745 ADGRG4Q8IZF6 3080 aa8.96□□□□□ -0.98
VPS41-201ENST00000265745 A0A1B0GTL3 188 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 A0A1W2PS29 197 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 OR6C76A6NM76 312 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 TRIM49D1C9J1S8 452 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 POC1B-GALNT4F8VUJ3 575 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 AQP7O14520 342 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 BCKDKO14874 412 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 SMIM24O75264 130 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 TOXO94900 526 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 RPS17P08708 135 aaKnown RBP8.95□□□□□ -0.98
VPS41-201ENST00000265745 SBK3P0C264 359 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 RFPL3SP0C7P2 107 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 IGFBP2P18065 325 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 ACVR2AP27037 513 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 CHRNB4P30926 498 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 ARL1P40616 181 aaPredicted RBP8.95□□□□□ -0.98
VPS41-201ENST00000265745 TFF3Q07654 80 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 FUT7Q11130 342 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 NTRK2Q16620 822 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 GGTA1PQ4G0N0 100 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 SGO1Q5FBB7 561 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 PRAMEF20Q5VT98 475 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 TTC19Q6DKK2 380 aaPredicted RBP8.95□□□□□ -0.98
VPS41-201ENST00000265745 OR52E8Q6IFG1 317 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 ZNF585AQ6P3V2 769 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms