RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 AUTS2Q8WXX7 1259 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 SAMD11Q96NU1 681 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 TKTL2Q9H0I9 626 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 FOLH1BQ9HBA9 442 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 OR6C2Q9NZP2 312 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 EMC3Q9P0I2 261 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 PLCL2Q9UPR0 1127 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 IQCF5A8MTL0 148 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 KRBOX1C9JBD0 128 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 GPR39O43194 453 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 LDB2O43679 373 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 IL1AP01583 271 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 HSD3B1P14060 373 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 KCNE1P15382 129 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 ELK1P19419 428 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 SOX18P35713 384 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 ETV5P41161 510 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 CD86P42081 329 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 PREPP48147 710 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 RAB13P51153 203 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 FABP5Q01469 135 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 TUSC3Q13454 348 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 CTXN3Q4LDR2 81 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 CLLU1OSQ5K130 101 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 PTCHD4Q6ZW05 846 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 NR2C2APQ86WQ0 139 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 CBLN2Q8IUK8 224 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 DMRTC2Q8IXT2 367 aaPredicted RBP8.33□□□□□ -1.08
VAPB-201ENST00000265619 THEM5Q8N1Q8 247 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 CARNMT1Q8N4J0 409 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 DENND6BQ8NEG7 585 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 TSSK3Q96PN8 268 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 NDUFAF4Q9P032 175 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 FBXW11Q9UKB1 542 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 CHST2Q9Y4C5 530 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 SCN10AQ9Y5Y9 1956 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 TEX13CA0A0J9YWL9 993 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 GLYATL1P3A0A0U1RQE8 302 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 EFCAB7A8K855 629 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 YY2O15391 372 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 NBNO60934 754 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 POP7O75817 140 aaKnown RBP8.33□□□□□ -1.08
VAPB-201ENST00000265619 RHOBTB1O94844 696 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 SOX14O95416 240 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 LGI1O95970 557 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 LALBAP00709 142 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 RLN2P04090 185 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 RPL34P49207 117 aaKnown RBP8.33□□□□□ -1.08
VAPB-201ENST00000265619 INPP1P49441 399 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 ITKQ08881 620 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 C3P1Q6ZMU1 363 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 CBLL1Q75N03 491 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 GOLGA7Q7Z5G4 137 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 ADGRG2Q8IZP9 1017 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 LGI4Q8N135 537 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 OR1S1Q8NH92 325 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 HGDQ93099 445 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 MRPL48Q96GC5 212 aaKnown RBP8.33□□□□□ -1.08
VAPB-201ENST00000265619 RBM14Q96PK6 669 aaKnown RBP8.33□□□□□ -1.08
VAPB-201ENST00000265619 SLC38A3Q99624 504 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 SMOQ99835 787 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 AARSD1Q9BTE6 412 aaKnown RBP8.33□□□□□ -1.08
VAPB-201ENST00000265619 ABCG5Q9H222 651 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 MFSD1Q9H3U5 465 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 SARS2Q9NP81 518 aaKnown RBP8.33□□□□□ -1.08
VAPB-201ENST00000265619 MLXQ9UH92 298 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 PURGQ9UJV8 347 aaKnown RBP8.33□□□□□ -1.08
VAPB-201ENST00000265619 POMT2Q9UKY4 750 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 MEIKINA0A087WXM9 373 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 PRMT3O60678 531 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 NIPSNAP2O75323 286 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 HLA-EP13747 358 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 PCSK1P29120 753 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 CCR1P32246 355 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 TRIM23P36406 574 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 SUOXP51687 545 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 CTSCP53634 463 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 TSPAN5P62079 268 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 E2F1Q01094 437 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 ADAM15Q13444 863 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 GANABQ14697 944 aaKnown RBP8.33□□□□□ -1.08
VAPB-201ENST00000265619 UPP1Q16831 310 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 VMACQ2NL98 169 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 PAN3Q58A45 887 aaKnown RBP8.33□□□□□ -1.08
VAPB-201ENST00000265619 ATAT1Q5SQI0 421 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 CEACAM20Q6UY09 585 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 HSDL2Q6YN16 418 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 SLC24A5Q71RS6 500 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 KRT74Q7RTS7 529 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 JAZF1Q86VZ6 243 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 TMEM173Q86WV6 379 aaPredicted RBP8.33□□□□□ -1.08
VAPB-201ENST00000265619 RNF175Q8N4F7 328 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 CLDN22Q8N7P3 220 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 RELL2Q8NC24 303 aaPredicted RBP8.33□□□□□ -1.08
VAPB-201ENST00000265619 KIAA1143Q96AT1 154 aaPredicted RBP8.33□□□□□ -1.08
VAPB-201ENST00000265619 C1GALT1C1Q96EU7 318 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 SCRN2Q96FV2 425 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 PEX11GQ96HA9 241 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 TSGA13Q96PP4 275 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 DPYSL5Q9BPU6 564 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms