RNA–Protein interactions for RNA: ENST00000264027.8

SC5D-201, Transcript of sterol-C5-desaturase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SC5D, Length 2,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-201ENST00000264027 TLR4O00206 839 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 MITFO75030 526 aaPredicted RBP13.69□□□□□ -0.22
SC5D-201ENST00000264027 AGR2O95994 175 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 FESP07332 822 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 CCDC159P0C7I6 412 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 HNRNPCL4P0DMR1 293 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 NR2F1P10589 423 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 CRHBPP24387 322 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 ELK4P28324 431 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 FEN1P39748 380 aaKnown RBP13.69□□□□□ -0.22
SC5D-201ENST00000264027 NUP107P57740 925 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 CD47Q08722 323 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 RUNX2Q13950 521 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 USP53Q70EK8 1073 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 SZRD1Q7Z422 152 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 SMYD1Q8NB12 490 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 NUP43Q8NFH3 380 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 OR10G2Q8NGC3 310 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 CLDN23Q96B33 292 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 SPACA7Q96KW9 195 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 COLQQ9Y215 455 aaPredicted RBP13.69□□□□□ -0.22
SC5D-201ENST00000264027 LIPT1Q9Y234 373 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 POFUT2Q9Y2G5 429 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 SLCO1B1Q9Y6L6 691 aa13.69□□□□□ -0.22
SC5D-201ENST00000264027 LOC105369274A0A096LPK9 316 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 LOC102723532A0A0G2JNH3 316 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 OR6B1O95007 311 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 RECKO95980 971 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 HMGN2P05204 90 aaKnown RBP13.68□□□□□ -0.22
SC5D-201ENST00000264027 TNFRSF1BP20333 461 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 OR1E2P47887 323 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 CDH12P55289 794 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 CXCR4P61073 352 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 LAPTM4AQ15012 233 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 GPR19Q15760 415 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 DUSP7Q16829 419 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 DEFB134Q4QY38 66 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 BROXQ5VW32 411 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 TMEM107Q6UX40 140 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 GALNT5Q7Z7M9 940 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 OR4N4Q8N0Y3 316 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 CSNK1A1LQ8N752 337 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 GPR32P1Q8NGA4 272 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 TREX2Q9BQ50 279 aaPredicted RBP13.68□□□□□ -0.22
SC5D-201ENST00000264027 TUBA1CQ9BQE3 449 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 SEC14L3Q9UDX4 400 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 SH3GLB1Q9Y371 365 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 GMPPBQ9Y5P6 360 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 TDRD6O60522 2096 aaKnown RBP13.68□□□□□ -0.22
SC5D-201ENST00000264027 WASHC1A8K0Z3 465 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 GADD45GO95257 159 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 PVRP15151 417 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 CLK3P49761 638 aaKnown RBP13.68□□□□□ -0.22
SC5D-201ENST00000264027 NPRL3Q12980 569 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 SYPL1Q16563 259 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 ZBED5Q49AG3 693 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 NIPAL1Q6NVV3 410 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 GPR141Q7Z602 305 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 TSPYL5Q86VY4 417 aaPredicted RBP13.68□□□□□ -0.22
SC5D-201ENST00000264027 C17orf82Q86X59 251 aaPredicted RBP13.68□□□□□ -0.22
SC5D-201ENST00000264027 C19orf47Q8N9M1 422 aaKnown RBP13.68□□□□□ -0.22
SC5D-201ENST00000264027 OR9A2Q8NGT5 310 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 XAGE5Q8WWM1 108 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 DHRS1Q96LJ7 313 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 CDX2Q99626 313 aaPredicted RBP13.68□□□□□ -0.22
SC5D-201ENST00000264027 IER2Q9BTL4 223 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 VCX3AQ9NNX9 186 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 ACER3Q9NUN7 267 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 PTGFRNQ9P2B2 879 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 CEPT1Q9Y6K0 416 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 SZT2Q5T011 3432 aa13.68□□□□□ -0.22
SC5D-201ENST00000264027 PRAMEF27A3QJZ7 478 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 CASC3O15234 703 aaKnown RBP13.67□□□□□ -0.22
SC5D-201ENST00000264027 CPNE6O95741 557 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 C8orf89P0DMQ9 161 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 FOSL2P15408 326 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 JUNBP17275 347 aaPredicted RBP13.67□□□□□ -0.22
SC5D-201ENST00000264027 SMIM11AP58511 58 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 RAPSNQ13702 412 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 PUM1Q14671 1186 aaKnown RBP eCLIP13.67□□□□□ -0.22
SC5D-201ENST00000264027 LASP1Q14847 261 aaKnown RBP13.67□□□□□ -0.22
SC5D-201ENST00000264027 EXOC3L2Q2M3D2 409 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 CTU2Q2VPK5 515 aaKnown RBP13.67□□□□□ -0.22
SC5D-201ENST00000264027 ZNF750Q32MQ0 723 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 SLC44A2Q8IWA5 706 aaPredicted RBP13.67□□□□□ -0.22
SC5D-201ENST00000264027 SFTPA2Q8IWL1 248 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 OR5D16Q8NGK9 328 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 CNDP2Q96KP4 475 aaKnown RBP13.67□□□□□ -0.22
SC5D-201ENST00000264027 COL21A1Q96P44 957 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 MS4A4EQ96PG1 132 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 CCDC3Q9BQI4 270 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 ACTRT3Q9BYD9 372 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 PAPOLBQ9NRJ5 636 aaKnown RBP13.67□□□□□ -0.22
SC5D-201ENST00000264027 PTTG2Q9NZH5 202 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 DOLKQ9UPQ8 538 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 CCDC88CQ9P219 2028 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 DUXAA6NLW8 204 aa13.67□□□□□ -0.22
SC5D-201ENST00000264027 ZNF701M0R085 212 aaPredicted RBP13.67□□□□□ -0.22
SC5D-201ENST00000264027 GALR3O60755 368 aaPredicted RBP13.67□□□□□ -0.22
SC5D-201ENST00000264027 ABCB7O75027 752 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms