RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 SMG7Q92540 1137 aaKnown RBP11.76□□□□□ -0.53
CHMP2B-201ENST00000263780 TM9SF2Q99805 663 aa11.76□□□□□ -0.53
CHMP2B-201ENST00000263780 BRD9Q9H8M2 597 aa11.76□□□□□ -0.53
CHMP2B-201ENST00000263780 A4GALTQ9NPC4 353 aa11.76□□□□□ -0.53
CHMP2B-201ENST00000263780 MYNNQ9NPC7 610 aa11.76□□□□□ -0.53
CHMP2B-201ENST00000263780 ACSL6Q9UKU0 697 aa11.76□□□□□ -0.53
CHMP2B-201ENST00000263780 EXO1Q9UQ84 846 aaKnown RBP11.76□□□□□ -0.53
CHMP2B-201ENST00000263780 A0A0A6YYJ9 748 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 ZNF840PA6NDX5 716 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 FOXE1O00358 373 aaPredicted RBP11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 B4GALT3O60512 393 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 PLOD3O60568 738 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 NME6O75414 186 aaPredicted RBP11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 SERPINI2O75830 405 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 IGSF6O95976 241 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 GSTM3P21266 225 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 MAPK9P45984 424 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 GIPRP48546 466 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 RPS13P62277 151 aaKnown RBP11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 HSF2Q03933 536 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 GINS1Q14691 196 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 FCN2Q15485 313 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 CCDC85BQ15834 202 aaPredicted RBP11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 SNAPC1Q16533 368 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 TCTN3Q6NUS6 607 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 AGTRAPQ6RW13 159 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 CRTC1Q6UUV9 634 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 PRICKLE2Q7Z3G6 844 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 RASGRP3Q8IV61 690 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 ADGRF3Q8IZF5 1079 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 OR6K2Q8NGY2 324 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 GATAD2BQ8WXI9 593 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 BRI3BPQ8WY22 251 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 RNFT2Q96EX2 444 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 ZSWIM3Q96MP5 696 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 SORCS2Q96PQ0 1159 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 UBL7Q96S82 380 aaPredicted RBP11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 ARHGAP9Q9BRR9 750 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 SRRDQ9UH36 339 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 UBQLN2Q9UHD9 624 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 OR51B4Q9Y5P0 310 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 ALPK3Q96L96 1907 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 A0A1B0GVI7 797 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 C7orf66A4D0T2 115 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 FAM227AF5H4B4 570 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 DUSP11O75319 330 aaKnown RBP11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 PSIP1O75475 530 aaKnown RBP11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 LATS1O95835 1130 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 RECKO95980 971 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 IGFBP1P08833 259 aaPredicted RBP11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 PEPDP12955 493 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 NAGAP17050 411 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 AVPR1BP47901 424 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 MADCAM1Q13477 382 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 CDH18Q13634 790 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 GPR176Q14439 515 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 MFSD13AQ14CX5 517 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 TMEM44Q2T9K0 475 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 GPR139Q6DWJ6 353 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 BCDIN3DQ7Z5W3 292 aaKnown RBP11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 KCTD20Q7Z5Y7 419 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 COMMD7Q86VX2 200 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 SYT14Q8NB59 555 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 LHFPL5Q8TAF8 219 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 NEIL3Q8TAT5 605 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 OTUB1Q96FW1 271 aaPredicted RBP11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 MED8Q96G25 268 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 ZNF354BQ96LW1 612 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 OR2M2Q96R28 347 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 ZNF607Q96SK3 696 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 ZSCAN5AQ9BUG6 496 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 ASB6Q9NWX5 421 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 ZNF222Q9UK12 451 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 CLCA2Q9UQC9 943 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 NOD1Q9Y239 953 aa11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 YARS2Q9Y2Z4 477 aaKnown RBP11.75□□□□□ -0.53
CHMP2B-201ENST00000263780 TUBAL3A6NHL2 446 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 AKAP8O43823 692 aaKnown RBP11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 CATP04040 527 aaKnown RBP11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 CHRM5P08912 532 aaPredicted RBP11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 AKR1A1P14550 325 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 C4BPBP20851 252 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 POU6F2P78424 691 aaPredicted RBP11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 SNTA1Q13424 505 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 MINDY4Q4G0A6 757 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 FLYWCH1Q4VC44 716 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 PLA1AQ53H76 456 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 FAM71E1Q6IPT2 247 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 CXCL17Q6UXB2 119 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 MARCH9Q86YJ5 346 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 C2orf69Q8N8R5 385 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 OR5AK3PQ8NH89 298 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 C16orf78Q8WTQ4 265 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 RFT1Q96AA3 541 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 CIDECQ96AQ7 238 aaPredicted RBP11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 SCRN2Q96FV2 425 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 GKN1Q9NS71 199 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 TRPM5Q9NZQ8 1165 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 ACAD8Q9UKU7 415 aa11.74□□□□□ -0.53
CHMP2B-201ENST00000263780 FKBP7Q9Y680 259 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms