RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 VWA5B2Q8N398 1253 aa17.45■□□□□ 0.38
CYSTM1-201ENST00000261811 NATD1Q8N6N6 113 aa17.45■□□□□ 0.38
CYSTM1-201ENST00000261811 OR7G1Q8NGA0 311 aa17.45■□□□□ 0.38
CYSTM1-201ENST00000261811 ZFP28Q8NHY6 868 aa17.45■□□□□ 0.38
CYSTM1-201ENST00000261811 ZNF721Q8TF20 911 aa17.45■□□□□ 0.38
CYSTM1-201ENST00000261811 CNRIP1Q96F85 164 aaPredicted RBP17.45■□□□□ 0.38
CYSTM1-201ENST00000261811 UTP23Q9BRU9 249 aaKnown RBP17.45■□□□□ 0.38
CYSTM1-201ENST00000261811 ATAD3AQ9NVI7 634 aa17.45■□□□□ 0.38
CYSTM1-201ENST00000261811 ASIC5Q9NY37 505 aa17.45■□□□□ 0.38
CYSTM1-201ENST00000261811 SH3BP4Q9P0V3 963 aa17.45■□□□□ 0.38
CYSTM1-201ENST00000261811 BAIAP2L1Q9UHR4 511 aa17.45■□□□□ 0.38
CYSTM1-201ENST00000261811 B3GNT3Q9Y2A9 372 aa17.45■□□□□ 0.38
CYSTM1-201ENST00000261811 AKAP10O43572 662 aa17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 TBX19O60806 448 aa17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 LRATO95237 230 aa17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 PDGFAP04085 211 aa17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 RNF4P78317 190 aa17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 C19orf57Q0VDD7 668 aa17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 MAP4K2Q12851 820 aa17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 TLR1Q15399 786 aa17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 HLA-DQA1Q5Y7H0 255 aa17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 FCRLBQ6BAA4 426 aa17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 SPATA19Q7Z5L4 167 aa17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 PTRH1Q86Y79 214 aaKnown RBP17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 GFM2Q969S9 779 aaKnown RBP17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 PNPLA2Q96AD5 504 aa17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 ERP27Q96DN0 273 aa17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 EGLN2Q96KS0 407 aa17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 ZNF681Q96N22 645 aa17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 SLAMF7Q9NQ25 335 aa17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 GIMAP2Q9UG22 337 aa17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 YARS2Q9Y2Z4 477 aaKnown RBP17.44■□□□□ 0.38
CYSTM1-201ENST00000261811 OR5H15A6NDH6 313 aa17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 TGDSO95455 350 aa17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 IGKV3-11P04433 115 aa17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 NCBP2P52298 156 aaKnown RBP eCLIP17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 MLF1P58340 268 aa17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 OC90Q02509 493 aaPredicted RBP17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 CEBPEQ15744 281 aa17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 PRICKLE4Q2TBC4 344 aa17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 NXNQ6DKJ4 435 aa17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 RGS9BPQ6ZS82 235 aa17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 ACAD11Q709F0 780 aa17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 BEST3Q8N1M1 668 aa17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 ARMC10Q8N2F6 343 aa17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 TMEM156Q8N614 296 aa17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 CLHC1Q8NHS4 586 aa17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 NUBPLQ8TB37 319 aa17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 ZNF675Q8TD23 568 aa17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 THAP3Q8WTV1 239 aaPredicted RBP17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 MYOTQ9UBF9 498 aa17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 RALYQ9UKM9 306 aaKnown RBP17.43■□□□□ 0.38
CYSTM1-201ENST00000261811 SPTA1P02549 2419 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 TRAV17A0A0B4J275 112 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 GABRR3A8MPY1 467 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 MYO1GB0I1T2 1018 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 B8ZZF3 427 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 PDPK1O15530 556 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 WDPCPO95876 746 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 CYB561P49447 251 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 SSR4P51571 173 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 SLC37A1P57057 533 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 FUT7Q11130 342 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 RPS6KA2Q15349 733 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 ZNF750Q32MQ0 723 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 OGFOD2Q6N063 350 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 DGAT2L6Q6ZPD8 337 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 LARP4Q71RC2 724 aaKnown RBP eCLIP17.42■□□□□ 0.381e-12■■■□□ 18.8
CYSTM1-201ENST00000261811 RBMXL3Q8N7X1 1067 aaKnown RBP17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 CEP70Q8NHQ1 597 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 SLC22A8Q8TCC7 542 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 ZBED6CLQ96FA7 236 aaPredicted RBP17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 MFRPQ9BY79 579 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 OR10A5Q9H207 317 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 ZBTB20Q9HC78 741 aaPredicted RBP17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 PRODH2Q9UF12 536 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 BCAP29Q9UHQ4 241 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 ZNF223Q9UK11 482 aaPredicted RBP17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 USH1CQ9Y6N9 552 aa17.42■□□□□ 0.38
CYSTM1-201ENST00000261811 C2orf92A0A1B0GVN3 265 aa17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 SDHDO14521 159 aa17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 SCAMP2O15127 329 aaKnown RBP17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 PRAMEF2O60811 474 aa17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 DIAPH2O60879 1101 aa17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 ITGA10O75578 1167 aa17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 G6PDP11413 515 aa17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 EPHA3P29320 983 aa17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 GPC1P35052 558 aa17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 CLDN8P56748 225 aa17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 PTGR1Q14914 329 aa17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 ZNF169Q14929 603 aaPredicted RBP17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 CPTPQ5TA50 214 aa17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 FAM180BQ6P0A1 224 aa17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 Q6ZS92 163 aa17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 GPALPP1Q8IXQ4 340 aa17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 ADCY4Q8NFM4 1077 aa17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 ASB15Q8WXK1 588 aa17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 TMEM125Q96AQ2 219 aa17.41■□□□□ 0.38
CYSTM1-201ENST00000261811 DPY30Q9C005 99 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms