RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 ACSM5Q6NUN0 579 aa18.33■□□□□ 0.52
SCARB1-201ENST00000261693 ZNF547Q8IVP9 402 aa18.33■□□□□ 0.52
SCARB1-201ENST00000261693 FBXO15Q8NCQ5 510 aaPredicted RBP18.33■□□□□ 0.52
SCARB1-201ENST00000261693 XAGE5Q8WWM1 108 aa18.33■□□□□ 0.52
SCARB1-201ENST00000261693 TM9SF2Q99805 663 aa18.33■□□□□ 0.52
SCARB1-201ENST00000261693 ZNF717Q9BY31 904 aaPredicted RBP18.33■□□□□ 0.52
SCARB1-201ENST00000261693 SERHL2Q9H4I8 314 aa18.33■□□□□ 0.52
SCARB1-201ENST00000261693 KCNK12Q9HB15 430 aa18.33■□□□□ 0.52
SCARB1-201ENST00000261693 NFKBIL1Q9UBC1 381 aaPredicted RBP18.33■□□□□ 0.52
SCARB1-201ENST00000261693 KIAA1549LQ6ZVL6 1849 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 A0A0G2JN53 185 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 PRAMEF27A3QJZ7 478 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 CCDC182A6NF36 153 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 DEFB103AP81534 67 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 HOXC5Q00444 222 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 PDZK1Q5T2W1 519 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 TRIM48Q8IWZ4 208 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 GATAD2BQ8WXI9 593 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 OR5P2Q8WZ92 322 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 C1GALT1C1Q96EU7 318 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 TEFMQ96QE5 360 aaKnown RBP18.32■□□□□ 0.52
SCARB1-201ENST00000261693 GPA33Q99795 319 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 RACGAP1Q9H0H5 632 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 A4GNTQ9UNA3 340 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 PCYT1BQ9Y5K3 369 aaPredicted RBP18.32■□□□□ 0.52
SCARB1-201ENST00000261693 WNT6Q9Y6F9 365 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 WASHC1A8K0Z3 465 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 POP7O75817 140 aaKnown RBP18.32■□□□□ 0.52
SCARB1-201ENST00000261693 TSPAN19P0C672 248 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 MMP11P24347 488 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 RPS25P62851 125 aaKnown RBP18.32■□□□□ 0.52
SCARB1-201ENST00000261693 NUMA1Q14980 2115 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 CDK10Q15131 360 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 TEAD2Q15562 447 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 PYDC2Q56P42 97 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 WASH2PQ6VEQ5 465 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 FAM83HQ6ZRV2 1179 aaPredicted RBP18.32■□□□□ 0.52
SCARB1-201ENST00000261693 FAM92BQ6ZTR7 304 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 SHFQ7M4L6 423 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 IQCHQ86VS3 1027 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 UBASH3BQ8TF42 649 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 SLC22A4Q9H015 551 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 SIRT3Q9NTG7 399 aaPredicted RBP18.32■□□□□ 0.52
SCARB1-201ENST00000261693 GPR52Q9Y2T5 361 aa18.32■□□□□ 0.52
SCARB1-201ENST00000261693 SLC35F4A4IF30 521 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 MMP20O60882 483 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 RAB36O95755 333 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 OCLNQ16625 522 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 ZER1Q7Z7L7 766 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 ZFP41Q8N8Y5 198 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 ANKRD53Q8N9V6 530 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 ZNF582Q96NG8 517 aaPredicted RBP18.31■□□□□ 0.52
SCARB1-201ENST00000261693 CUEDC1Q9NWM3 386 aaPredicted RBP18.31■□□□□ 0.52
SCARB1-201ENST00000261693 TAC3Q9UHF0 121 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 SNX7Q9UNH6 387 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 HCFC2Q9Y5Z7 792 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 HEATR5BQ9P2D3 2071 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 TCF20Q9UGU0 1960 aaKnown RBP18.31■□□□□ 0.52
SCARB1-201ENST00000261693 TSPAN11A1L157 253 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 HMX3A6NHT5 357 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 CD83Q01151 205 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 KHDRBS2Q5VWX1 349 aaKnown RBP18.31■□□□□ 0.52
SCARB1-201ENST00000261693 FAM129CQ86XR2 697 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 SMPDL3AQ92484 453 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 UBE2E3Q969T4 207 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 DTD2Q96FN9 168 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 DHRS1Q96LJ7 313 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 ZNF607Q96SK3 696 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 ZDHHC5Q9C0B5 715 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 TRPC4Q9UBN4 977 aa18.31■□□□□ 0.52
SCARB1-201ENST00000261693 PI15O43692 258 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 PDE9AO76083 593 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 EPHX1P07099 455 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 GPR1P46091 355 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 CCT3P49368 545 aaKnown RBP18.3■□□□□ 0.52
SCARB1-201ENST00000261693 SNAPC1Q16533 368 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 KRT78Q8N1N4 520 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 OR4K5Q8NGD3 323 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 TM9SF4Q92544 642 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 ZFYVE19Q96K21 471 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 FNDC11Q9BVV2 318 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 TEX10Q9NXF1 929 aaPredicted RBP18.3■□□□□ 0.52
SCARB1-201ENST00000261693 AHSPQ9NZD4 102 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 MALT1Q9UDY8 824 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 DIMT1Q9UNQ2 313 aaKnown RBP18.3■□□□□ 0.52
SCARB1-201ENST00000261693 CDH23Q9H251 3354 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 A0A0B4J293 547 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 IL1AP01583 271 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 PSMB5P28074 263 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 BSGP35613 385 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 GIPRP48546 466 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 ASAH1Q13510 395 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 CRTC2Q53ET0 693 aaPredicted RBP18.3■□□□□ 0.52
SCARB1-201ENST00000261693 CCDC149Q6ZUS6 474 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 LAPTM4BQ86VI4 370 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 LSRQ86X29 649 aaPredicted RBP18.3■□□□□ 0.52
SCARB1-201ENST00000261693 FAM26EQ8N5C1 309 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 PXYLP1Q8TE99 480 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 RNF31Q96EP0 1072 aa18.3■□□□□ 0.52
SCARB1-201ENST00000261693 YIPF4Q9BSR8 244 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms