RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 EMC7Q9NPA0 242 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 PTTG3PQ9NZH4 202 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 PSAT1Q9Y617 370 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 RAB4BP61018 213 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 ALG10Q5BKT4 473 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 GLT8D1Q68CQ7 371 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 CORO6Q6QEF8 472 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 NETO1Q8TDF5 533 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 ACSL6Q9UKU0 697 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 ZFP37Q9Y6Q3 630 aaPredicted RBP6.87□□□□□ -1.31
HERC2-201ENST00000261609 TBC1D3DA0A087WVF3 549 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 TBC1D3IA0A087WXS9 549 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 TBC1D3EA0A087X179 549 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 TBC1D3KA0A087X1G2 549 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 TBC1D3FA6NER0 549 aaPredicted RBP6.87□□□□□ -1.31
HERC2-201ENST00000261609 TBC1D3LB9A6J9 549 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 ALPIP09923 528 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 TBC1D3HP0C7X1 549 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 BMP8BP34820 402 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 HK3P52790 923 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 PDX1P52945 283 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 TRAM2Q15035 370 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 TBC1D3GQ6DHY5 549 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 TBC1D3CQ6IPX1 549 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 BMP8AQ7Z5Y6 402 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 KLBQ86Z14 1044 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 TBC1D3Q8IZP1 549 aaPredicted RBP6.87□□□□□ -1.31
HERC2-201ENST00000261609 HS3ST5Q8IZT8 346 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 ZNF454Q8N9F8 522 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 ST7LQ8TDW4 575 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 CNN2Q99439 309 aaKnown RBP6.87□□□□□ -1.31
HERC2-201ENST00000261609 POPDC3Q9HBV1 291 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 GIMAP2Q9UG22 337 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 GTF2IRD1Q9UHL9 959 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 SHPRHQ149N8 1683 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 SLIT3O75094 1523 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 TXNDC12O95881 172 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 UBBP0CG47 229 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 UBCP0CG48 685 aaKnown RBP6.87□□□□□ -1.31
HERC2-201ENST00000261609 SLC6A6P31641 620 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 RPS27AP62979 156 aaKnown RBP6.87□□□□□ -1.31
HERC2-201ENST00000261609 UBA52P62987 128 aaKnown RBP6.87□□□□□ -1.31
HERC2-201ENST00000261609 PRKCZQ05513 592 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 PAFAH1B3Q15102 231 aaKnown RBP6.87□□□□□ -1.31
HERC2-201ENST00000261609 NPY5RQ15761 445 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 CLEC4CQ8WTT0 213 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 NOX3Q9HBY0 568 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 LAMP5Q9UJQ1 280 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 TMPRSS11EQ9UL52 423 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 PTGDR2Q9Y5Y4 395 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 A6NIN4 97 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 SULT1C4O75897 302 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 OLIG2Q13516 323 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 KIAA1324Q6UXG2 1013 aaKnown RBP6.87□□□□□ -1.31
HERC2-201ENST00000261609 NRROSQ86YC3 692 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 OR5AK3PQ8NH89 298 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 TAAR8Q969N4 342 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 TTC24A2A3L6 582 aaPredicted RBP6.87□□□□□ -1.31
HERC2-201ENST00000261609 MMP20O60882 483 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 SDC3O75056 442 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 PIGRP01833 764 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 SOX2P48431 317 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 NLRP8Q86W28 1048 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 NTPCRQ9BSD7 190 aaKnown RBP6.87□□□□□ -1.31
HERC2-201ENST00000261609 KCNH6Q9H252 994 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 OR51F1A6NGY5 319 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 HTRA4P83105 476 aaPredicted RBP6.87□□□□□ -1.31
HERC2-201ENST00000261609 FXNQ16595 210 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 HAS2Q92819 552 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 TRIP11Q15643 1979 aa6.87□□□□□ -1.31
HERC2-201ENST00000261609 DLSTP36957 453 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 VGLL4Q14135 290 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 ALKAL2Q6UX46 152 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 LYSMD3Q7Z3D4 306 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 OR10K1Q8NGX5 313 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 ZBED3Q96IU2 234 aaPredicted RBP6.86□□□□□ -1.31
HERC2-201ENST00000261609 C12orf57Q99622 126 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 CENPMQ9NSP4 180 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 ZDHHC3Q9NYG2 299 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 KLHL21Q9UJP4 597 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 NEURL4Q96JN8 1562 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 NPIPA7E9PJI5 369 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 PRAMEF2O60811 474 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 NPIPA8P0DM63 369 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 HSD3B1P14060 373 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 PPM1AP35813 382 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 OR13C4Q8NGS5 318 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 NT5C3BQ969T7 300 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 CTRCQ99895 268 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 PINK1Q9BXM7 581 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.86□□□□□ -1.31
HERC2-201ENST00000261609 TMEM248Q9NWD8 314 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 ASH2LQ9UBL3 628 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 ADAM18Q9Y3Q7 739 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 CDC7O00311 574 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 CHAF1BQ13112 559 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 PPIGQ13427 754 aaKnown RBP eCLIP6.86□□□□□ -1.317e-7■■■□□ 16.9
HERC2-201ENST00000261609 GRIK5Q16478 980 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 OR2T33Q8NG76 320 aa6.86□□□□□ -1.31
HERC2-201ENST00000261609 TMEM41AQ96HV5 264 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms