RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 LIX1Q8N485 282 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 OR9A1PQ8NGU1 263 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 LZICQ8WZA0 190 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 ATOH1Q92858 354 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 APOLD1Q96LR9 279 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 FANCFQ9NPI8 374 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 USF3Q68DE3 2245 aa5.22□□□□□ -1.57
TOPBP1-201ENST00000260810 A0A1W2PPR1 153 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 H0YGG7 62 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 COPEO14579 308 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 NVLO15381 856 aaKnown RBP5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 GALR3O60755 368 aaPredicted RBP5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 PDE9AO76083 593 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 LRATO95237 230 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 MAP4P27816 1152 aaKnown RBP5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 EPHA8P29322 1005 aaPredicted RBP5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 MTHFRP42898 656 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 ARF3P61204 181 aaPredicted RBP5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 ERVK-8P63133 956 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 RELAQ04206 551 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 TP53BP2Q13625 1128 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 DUSP5Q16690 384 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 LCTLQ6UWM7 567 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 FAM122BQ7Z309 247 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 MILR1Q7Z6M3 343 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 WDSUB1Q8N9V3 476 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 ADAMTS16Q8TE57 1224 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 GRIP2Q9C0E4 1043 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 LIN28AQ9H9Z2 209 aaKnown RBP5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 ARMC1Q9NVT9 282 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 IRAK4Q9NWZ3 460 aa5.21□□□□□ -1.57
TOPBP1-201ENST00000260810 PROB1E7EW31 1015 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 FRS3O43559 492 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 TLX3O43711 291 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 VEGFDO43915 354 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 SRSF10O75494 262 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 AP2A2O94973 939 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 IL3P08700 152 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 HIST1H2AGP0C0S8 130 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 HIST1H2ADP20671 130 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 CAPZBP47756 277 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 PLA2G7Q13093 441 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 CUL3Q13618 768 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 FRG2Q64ET8 278 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 ZC3H14Q6PJT7 736 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 LCA5Q86VQ0 697 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 SLC7A13Q8TCU3 470 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 PPWD1Q96BP3 646 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 RBMXL1Q96E39 390 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 HIST1H2AHQ96KK5 128 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 FRG2BQ96QU4 278 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 SEPHS2Q99611 448 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 HIST1H2AJQ99878 128 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 H2AFJQ9BTM1 129 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 SLC7A5P2Q9GIP4 190 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 RNF167Q9H6Y7 350 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 TCF7L2Q9NQB0 619 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 TAS2R16Q9NYV7 291 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 PKDREJQ9NTG1 2253 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 CCDC22O60826 627 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 ASLP04424 464 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 CBSLP0DN79 551 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 UROSP10746 265 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 SLC2A4P14672 509 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 ZNF10P21506 573 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 CBSP35520 551 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 ATP4BP51164 291 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 FOXG1P55316 489 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 FOXK2Q01167 660 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 CHIT1Q13231 466 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 AP5B1Q2VPB7 878 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 PDCD4Q53EL6 469 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 METTL21CQ5VZV1 264 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 SPESP1Q6UW49 350 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 LPCAT2Q7L5N7 544 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 SSX6Q7RTT6 188 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 CRLF3Q8IUI8 442 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 CLYBLQ8N0X4 340 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 MFSD2AQ8NA29 543 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 LRTOMTQ8WZ04 291 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 ZNF837Q96EG3 531 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 DPH7Q9BTV6 452 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 HEATR1Q9H583 2144 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 CCDC177Q9NQR7 707 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 EPHA6Q9UF33 1036 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 PLXNB1O43157 2135 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 LOC101059948A0A1B0GTJ6 334 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 PCDH17O14917 1159 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 SCAMP2O15127 329 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 UGT2B17O75795 530 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 C1GALT1C1LP0DN25 315 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 NBL1P41271 181 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 IL2P60568 153 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 MFAP5Q13361 173 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 MLC1Q15049 377 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 EMC4Q5J8M3 183 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 CCNJQ5T5M9 372 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 LYPLAL1Q5VWZ2 237 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 ZDHHC20Q5W0Z9 365 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 ATG4DQ86TL0 474 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms