RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 GIMAP4Q9NUV9 329 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 SUSD2Q9UGT4 822 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 CST1P01037 141 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 ARAFP10398 606 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 GABRA4P48169 554 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 PPP1R8Q12972 351 aaKnown RBP17.78■□□□□ 0.44
TRIM47-201ENST00000254816 DYNC1I2Q13409 638 aaKnown RBP17.78■□□□□ 0.44
TRIM47-201ENST00000254816 DTWD2Q8NBA8 298 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 OR5D16Q8NGK9 328 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 KAT2AQ92830 837 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 ZDHHC12Q96GR4 267 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 YIPF4Q9BSR8 244 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 MAGIXQ9H6Y5 334 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 C8orf4Q9NR00 106 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 IRAK4Q9NWZ3 460 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 RPS6KA6Q9UK32 745 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 NCOR1O75376 2440 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 A0A0A6YYC8 382 aaPredicted RBP17.78■□□□□ 0.44
TRIM47-201ENST00000254816 A0A1B0GTQ1 180 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 I3L1I5 382 aaPredicted RBP17.78■□□□□ 0.44
TRIM47-201ENST00000254816 LDB3O75112 727 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 DEAF1O75398 565 aaPredicted RBP17.78■□□□□ 0.44
TRIM47-201ENST00000254816 NME6O75414 186 aaPredicted RBP17.78■□□□□ 0.44
TRIM47-201ENST00000254816 MPIP34949 423 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 YAP1P46937 504 aaKnown RBP17.78■□□□□ 0.44
TRIM47-201ENST00000254816 XKP51811 444 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 TUBA4AP68366 448 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 CEBPEQ15744 281 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 PRTGQ2VWP7 1150 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 EIF3MQ7L2H7 374 aaKnown RBP17.78■□□□□ 0.44
TRIM47-201ENST00000254816 STK32CQ86UX6 486 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 C11orf74Q86VG3 221 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 DOK4Q8TEW6 326 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 SLC35G5Q96KT7 338 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 LIN28AQ9H9Z2 209 aaKnown RBP17.78■□□□□ 0.44
TRIM47-201ENST00000254816 ANKHQ9HCJ1 492 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 LYRM4Q9HD34 91 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 PSME2Q9UL46 239 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 CLCA2Q9UQC9 943 aa17.78■□□□□ 0.44
TRIM47-201ENST00000254816 HMGN4O00479 90 aa17.77■□□□□ 0.44
TRIM47-201ENST00000254816 BMP10O95393 424 aa17.77■□□□□ 0.44
TRIM47-201ENST00000254816 ATXN8OSP0DMR3 200 aa17.77■□□□□ 0.44
TRIM47-201ENST00000254816 TLX1P31314 330 aaPredicted RBP17.77■□□□□ 0.44
TRIM47-201ENST00000254816 CSF2RBP32927 897 aa17.77■□□□□ 0.44
TRIM47-201ENST00000254816 MC3RP41968 323 aa17.77■□□□□ 0.44
TRIM47-201ENST00000254816 RBBP4Q09028 425 aa17.77■□□□□ 0.44
TRIM47-201ENST00000254816 RPS26P11Q5JNZ5 115 aaPredicted RBP17.77■□□□□ 0.44
TRIM47-201ENST00000254816 FKBP9P1Q75LS8 142 aa17.77■□□□□ 0.44
TRIM47-201ENST00000254816 KANSL1Q7Z3B3 1105 aa17.77■□□□□ 0.44
TRIM47-201ENST00000254816 RAB33BQ9H082 229 aa17.77■□□□□ 0.44
TRIM47-201ENST00000254816 OR51I1Q9H343 314 aa17.77■□□□□ 0.44
TRIM47-201ENST00000254816 PDE7BQ9NP56 450 aa17.77■□□□□ 0.44
TRIM47-201ENST00000254816 MS4A12Q9NXJ0 267 aa17.77■□□□□ 0.44
TRIM47-201ENST00000254816 EPHA6Q9UF33 1036 aa17.77■□□□□ 0.44
TRIM47-201ENST00000254816 RSL24D1Q9UHA3 163 aaKnown RBP17.77■□□□□ 0.44
TRIM47-201ENST00000254816 A0A087WXM4 84 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 A8MU76 341 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 TMEM229AB2RXF0 380 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 hCG_2039718K7EN88 272 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 SRPX2O60687 465 aaPredicted RBP17.77■□□□□ 0.43
TRIM47-201ENST00000254816 BCHEP06276 602 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 OR12D1P0DN82 309 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 ARSFP54793 590 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 ADARB1P78563 741 aaKnown RBP17.77■□□□□ 0.43
TRIM47-201ENST00000254816 LPAL2Q16609 132 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 PATL1Q86TB9 770 aaKnown RBP17.77■□□□□ 0.43
TRIM47-201ENST00000254816 ZDHHC21Q8IVQ6 265 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 HS3ST5Q8IZT8 346 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 OR4K14Q8NGD5 310 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 SAP25Q8TEE9 199 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 CCDC74AQ96AQ1 378 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 RBCK1Q9BYM8 510 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 SPRTNQ9H040 489 aaPredicted RBP17.77■□□□□ 0.43
TRIM47-201ENST00000254816 SEMA3GQ9NS98 782 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 NLGN3Q9NZ94 848 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 TRPC4Q9UBN4 977 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 ABCG2Q9UNQ0 655 aa17.77■□□□□ 0.43
TRIM47-201ENST00000254816 NINQ8N4C6 2090 aa17.76■□□□□ 0.43
TRIM47-201ENST00000254816 M0QX08 132 aa17.76■□□□□ 0.43
TRIM47-201ENST00000254816 CYR61O00622 381 aa17.76■□□□□ 0.43
TRIM47-201ENST00000254816 DUX1O43812 170 aa17.76■□□□□ 0.43
TRIM47-201ENST00000254816 DIRAS1O95057 198 aa17.76■□□□□ 0.43
TRIM47-201ENST00000254816 ALBP02768 609 aa17.76■□□□□ 0.43
TRIM47-201ENST00000254816 ZNF630Q2M218 657 aaPredicted RBP17.76■□□□□ 0.43
TRIM47-201ENST00000254816 CYP27C1Q4G0S4 372 aa17.76■□□□□ 0.43
TRIM47-201ENST00000254816 METTL27Q8N6F8 245 aaPredicted RBP17.76■□□□□ 0.43
TRIM47-201ENST00000254816 SLC38A5Q8WUX1 472 aa17.76■□□□□ 0.43
TRIM47-201ENST00000254816 TAMM41Q96BW9 452 aa17.76■□□□□ 0.43
TRIM47-201ENST00000254816 TBC1D20Q96BZ9 403 aa17.76■□□□□ 0.43
TRIM47-201ENST00000254816 C16orf58Q96GQ5 468 aa17.76■□□□□ 0.43
TRIM47-201ENST00000254816 GAREM1Q9H706 876 aa17.76■□□□□ 0.43
TRIM47-201ENST00000254816 PLCL2Q9UPR0 1127 aa17.76■□□□□ 0.43
TRIM47-201ENST00000254816 GNGT2O14610 69 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 SUV39H1O43463 412 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 FOXS1O43638 330 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 FGF17O60258 216 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 PRSS23O95084 383 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 ZBTB11O95625 1053 aaPredicted RBP17.75■□□□□ 0.43
TRIM47-201ENST00000254816 SEMG1P04279 462 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 TNFRSF1BP20333 461 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms