RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 ZNF140P52738 457 aaPredicted RBP18.08■□□□□ 0.49
PTPRE-201ENST00000254667 TMEM130Q8N3G9 435 aa18.08■□□□□ 0.49
PTPRE-201ENST00000254667 ZNF565Q8N9K5 539 aa18.08■□□□□ 0.49
PTPRE-201ENST00000254667 SAGE1Q9NXZ1 904 aa18.08■□□□□ 0.49
PTPRE-201ENST00000254667 TAS2R10Q9NYW0 307 aa18.08■□□□□ 0.49
PTPRE-201ENST00000254667 GPR37L1O60883 481 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 SNAPC5O75971 98 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 CSN2P05814 226 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 ATF6P18850 670 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 PVALBP20472 110 aaPredicted RBP18.08■□□□□ 0.48
PTPRE-201ENST00000254667 ACTA2P62736 377 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 ACTG2P63267 376 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 DEFB103AP81534 67 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 NDUFAF5Q5TEU4 345 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 OR51A7Q8NH64 312 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 RPS3AP61247 264 aaKnown RBP18.08■□□□□ 0.48
PTPRE-201ENST00000254667 SHC2P98077 582 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 GK3PQ14409 553 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 METTL25Q8N6Q8 603 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 TMEM19Q96HH6 336 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 LPAR4Q99677 370 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 DPH2Q9BQC3 489 aaPredicted RBP18.08■□□□□ 0.48
PTPRE-201ENST00000254667 SDR39U1Q9NRG7 319 aaPredicted RBP18.08■□□□□ 0.48
PTPRE-201ENST00000254667 PCDH10Q9P2E7 1040 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 SCP2D1Q9UJQ7 156 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 HCN2Q9UL51 889 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 LOC285095A0A1B0GVY8 99 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 KANTRA0A1W2PQU2 76 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 AXIN1O15169 862 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 EDN1P05305 212 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 PGGT1BP53609 377 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 KIR2DS3Q14952 304 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 EIF5AL1Q6IS14 154 aaKnown RBP18.08■□□□□ 0.48
PTPRE-201ENST00000254667 SNX29P2Q8IUI4 249 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 PLEKHA6Q9Y2H5 1048 aa18.08■□□□□ 0.48
PTPRE-201ENST00000254667 PDHA2P29803 388 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 MARVELD2Q8N4S9 558 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 ZNF615Q8N8J6 731 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 GPR26Q8NDV2 337 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 DTD2Q96FN9 168 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 TMEM41AQ96HV5 264 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 ARHGAP9Q9BRR9 750 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 TPSD1Q9BZJ3 242 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 METTL8Q9H825 291 aaKnown RBP18.07■□□□□ 0.48
PTPRE-201ENST00000254667 FTSJ1Q9UET6 329 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 BTNL2Q9UIR0 455 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 VSTM2BA6NLU5 285 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 ADAMTS4O75173 837 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 SCGNO76038 276 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 DHRS4L1P0CG22 281 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 ADORA3P0DMS8 318 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 LAMP1P11279 417 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 HTR6P50406 440 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 SIM1P81133 766 aaPredicted RBP18.07■□□□□ 0.48
PTPRE-201ENST00000254667 ZMYND11Q15326 602 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 ARFGAP1Q8N6T3 406 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.07■□□□□ 0.48
PTPRE-201ENST00000254667 KCNN1Q92952 543 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 FUZQ9BT04 418 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 TREX1Q9NSU2 369 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 OR2AT4A6NND4 320 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 LRRN3E7EW58 273 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 PHYHO14832 338 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 SMAD6O43541 496 aaKnown RBP18.07■□□□□ 0.48
PTPRE-201ENST00000254667 HK3P52790 923 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 GABARAPL2P60520 117 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 CRYZQ08257 329 aaKnown RBP18.07■□□□□ 0.48
PTPRE-201ENST00000254667 GXYLT1Q4G148 440 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 USP53Q70EK8 1073 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 DCP2Q8IU60 420 aaKnown RBP18.07■□□□□ 0.48
PTPRE-201ENST00000254667 MDGA1Q8NFP4 955 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 LRRN3Q9H3W5 708 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 GSTO2Q9H4Y5 243 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 HCFC1R1Q9NWW0 138 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 POLR1CO15160 346 aaPredicted RBP18.07■□□□□ 0.48
PTPRE-201ENST00000254667 ELK4P28324 431 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 RPL19P84098 196 aaKnown RBP18.07■□□□□ 0.48
PTPRE-201ENST00000254667 ZNF45Q02386 682 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 ZNF423Q2M1K9 1284 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 ZNF829Q3KNS6 432 aaPredicted RBP18.07■□□□□ 0.48
PTPRE-201ENST00000254667 OR6C4Q8NGE1 309 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 PTERQ96BW5 349 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 PEX11GQ96HA9 241 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 SECISBP2Q96T21 854 aaKnown RBP18.07■□□□□ 0.48
PTPRE-201ENST00000254667 SLC46A2Q9BY10 475 aa18.07■□□□□ 0.48
PTPRE-201ENST00000254667 RPS17P08708 135 aaKnown RBP18.06■□□□□ 0.48
PTPRE-201ENST00000254667 ARSAP15289 507 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 IL1RNP18510 177 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 CELP19835 753 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 GRIN2CQ14957 1233 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 C18orf21Q32NC0 220 aaPredicted RBP18.06■□□□□ 0.48
PTPRE-201ENST00000254667 HSD17B12Q53GQ0 312 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 OR7G3Q8NG95 312 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 APIPQ96GX9 242 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 CITED4Q96RK1 184 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 ZBTB42B2RXF5 422 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 ETFAP13804 333 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 DSC1Q08554 894 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 ALKAL1Q6UXT8 129 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 CHRDL2Q6WN34 429 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms