RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 PMP22Q01453 160 aa23.24■■□□□ 1.31
LSM7-201ENST00000252622 EBPQ15125 230 aaKnown RBP23.24■■□□□ 1.31
LSM7-201ENST00000252622 SLC29A4Q7RTT9 530 aa23.24■■□□□ 1.31
LSM7-201ENST00000252622 NUDCD3Q8IVD9 361 aa23.24■■□□□ 1.31
LSM7-201ENST00000252622 SAMD14Q8IZD0 417 aaPredicted RBP23.24■■□□□ 1.31
LSM7-201ENST00000252622 CNRIP1Q96F85 164 aaPredicted RBP23.24■■□□□ 1.31
LSM7-201ENST00000252622 ZNF681Q96N22 645 aa23.24■■□□□ 1.31
LSM7-201ENST00000252622 TUBB1Q9H4B7 451 aa23.24■■□□□ 1.31
LSM7-201ENST00000252622 HPF1Q9NWY4 346 aa23.24■■□□□ 1.31
LSM7-201ENST00000252622 UTS2RQ9UKP6 389 aa23.24■■□□□ 1.31
LSM7-201ENST00000252622 KLF13Q9Y2Y9 288 aaPredicted RBP23.24■■□□□ 1.31
LSM7-201ENST00000252622 TRAF6Q9Y4K3 522 aa23.24■■□□□ 1.31
LSM7-201ENST00000252622 PTGDR2Q9Y5Y4 395 aa23.24■■□□□ 1.31
LSM7-201ENST00000252622 ZNF780BQ9Y6R6 833 aa23.24■■□□□ 1.31
LSM7-201ENST00000252622 OR6B1O95007 311 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 CT62P0C5K7 136 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 ARRB2P32121 409 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 FEN1P39748 380 aaKnown RBP23.23■■□□□ 1.31
LSM7-201ENST00000252622 SOX3P41225 446 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 ELOAQ14241 798 aaKnown RBP23.23■■□□□ 1.31
LSM7-201ENST00000252622 KIAA0040Q15053 153 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 MAPKAPK3Q16644 382 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 UGT3A2Q3SY77 523 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 PIGGQ5H8A4 983 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 OPN5Q6U736 354 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 Q6ZSR9 355 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 LRRC25Q8N386 305 aaPredicted RBP23.23■■□□□ 1.31
LSM7-201ENST00000252622 OR7G1Q8NGA0 311 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.23■■□□□ 1.312e-19■■■■□ 20.3
LSM7-201ENST00000252622 TWIST2Q8WVJ9 160 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 PKNOX2Q96KN3 472 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 FRMD6Q96NE9 622 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 WWTR1Q9GZV5 400 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 LRTM1Q9HBL6 345 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 MYNNQ9NPC7 610 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 TIMMDC1Q9NPL8 285 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 C1orf109Q9NX04 203 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 ERVK-11Q9UQG0 969 aa23.23■■□□□ 1.31
LSM7-201ENST00000252622 POLR3HQ9Y535 204 aaPredicted RBP23.23■■□□□ 1.31
LSM7-201ENST00000252622 FLNCQ14315 2725 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 TMEM233B4DJY2 109 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 DDCP20711 480 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 SSTR4P31391 388 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 DUSP2Q05923 314 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 MAP4K2Q12851 820 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 PRICKLE4Q2TBC4 344 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 SH2D4BQ5SQS7 431 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 NOXRED1Q6NXP6 359 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 IKBIPQ70UQ0 350 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 VWA5B2Q8N398 1253 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 FAM26EQ8N5C1 309 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 SLC15A4Q8N697 577 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 OR2T11Q8NH01 316 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 SLC22A8Q8TCC7 542 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 FCRL1Q96LA6 429 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 GAL3ST4Q96RP7 486 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 MAT2BQ9NZL9 334 aa23.22■■□□□ 1.31
LSM7-201ENST00000252622 ZNF354AO60765 605 aaPredicted RBP23.21■■□□□ 1.31
LSM7-201ENST00000252622 SEC22BO75396 215 aa23.21■■□□□ 1.31
LSM7-201ENST00000252622 NADKO95544 446 aaPredicted RBP23.21■■□□□ 1.31
LSM7-201ENST00000252622 MGAT2Q10469 447 aa23.21■■□□□ 1.31
LSM7-201ENST00000252622 MPP2Q14168 576 aa23.21■■□□□ 1.31
LSM7-201ENST00000252622 CEBPEQ15744 281 aa23.21■■□□□ 1.31
LSM7-201ENST00000252622 FAM71E1Q6IPT2 247 aa23.21■■□□□ 1.31
LSM7-201ENST00000252622 IL20RBQ6UXL0 311 aa23.21■■□□□ 1.31
LSM7-201ENST00000252622 MDGA2Q7Z553 956 aa23.21■■□□□ 1.31
LSM7-201ENST00000252622 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.21■■□□□ 1.31
LSM7-201ENST00000252622 ZNF615Q8N8J6 731 aa23.21■■□□□ 1.31
LSM7-201ENST00000252622 POGLUT1Q8NBL1 392 aa23.21■■□□□ 1.31
LSM7-201ENST00000252622 PPP1R14CQ8TAE6 165 aa23.21■■□□□ 1.31
LSM7-201ENST00000252622 ZBTB9Q96C00 473 aa23.21■■□□□ 1.31
LSM7-201ENST00000252622 OR10A5Q9H207 317 aa23.21■■□□□ 1.31
LSM7-201ENST00000252622 KCNK9Q9NPC2 374 aa23.21■■□□□ 1.31
LSM7-201ENST00000252622 GIMAP4Q9NUV9 329 aa23.21■■□□□ 1.31
LSM7-201ENST00000252622 ENTPD4Q9Y227 616 aa23.21■■□□□ 1.31
LSM7-201ENST00000252622 ZIC2O95409 532 aaPredicted RBP23.2■■□□□ 1.3
LSM7-201ENST00000252622 SERPINE1P05121 402 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 LINC00032P0C843 101 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 S1PR1P21453 382 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 MST1P26927 711 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 SRSF1Q07955 248 aaKnown RBP eCLIP23.2■■□□□ 1.33e-6■□□□□ 9.3
LSM7-201ENST00000252622 EIF2S3LQ2VIR3 472 aaKnown RBP23.2■■□□□ 1.3
LSM7-201ENST00000252622 FHL5Q5TD97 284 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 RTL4Q6ZR62 310 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 DDIASQ8IXT1 998 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 ZNF441Q8N8Z8 693 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 GOLM1Q8NBJ4 401 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 PSD4Q8NDX1 1056 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 CDC26Q8NHZ8 85 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 ZNF675Q8TD23 568 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 EXOSC8Q96B26 276 aaKnown RBP23.2■■□□□ 1.3
LSM7-201ENST00000252622 CTHRC1Q96CG8 243 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 SGCZQ96LD1 299 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 BRINP2Q9C0B6 783 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 SLC35C2Q9NQQ7 365 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 ZNF639Q9UID6 485 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 TMED5Q9Y3A6 229 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 ESPL1Q14674 2120 aa23.2■■□□□ 1.3
LSM7-201ENST00000252622 C2orf92A0A1B0GVN3 265 aa23.19■■□□□ 1.3
LSM7-201ENST00000252622 TMEM114B3SHH9 223 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms