RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 MRPS30Q9NP92 439 aaKnown RBP18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 EHD3Q9NZN3 535 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 MOSPD1Q9UJG1 213 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 A0A1W2PR48 441 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 ERI3O43414 337 aaKnown RBP18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 PRICKLE3O43900 615 aaPredicted RBP18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 CNOT3O75175 753 aaKnown RBP18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 SERPINB7O75635 380 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 OXSR1O95747 527 aaPredicted RBP18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 EPPINO95925 133 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 NR2F1P10589 423 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 CDH3P22223 829 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 EIF2DP41214 584 aaKnown RBP18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 SOX9P48436 509 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 PRKAG1P54619 331 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 SEC13P55735 322 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 FUT5Q11128 374 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 MED22Q15528 200 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 PLAG1Q6DJT9 500 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 KIAA1211LQ6NV74 962 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 ZNF367Q7RTV3 350 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 RASSF5Q8WWW0 418 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 DACH2Q96NX9 599 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 CHCHD6Q9BRQ6 235 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 C1QTNF2Q9BXJ5 285 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 ANKHQ9HCJ1 492 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 FZD3Q9NPG1 666 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 PRDM7Q9NQW5 492 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 TRNAU1APQ9NX07 287 aaKnown RBP18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 NDOR1Q9UHB4 597 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 SLC17A4Q9Y2C5 497 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 ATG4BQ9Y4P1 393 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 ASB4Q9Y574 426 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 A0A1W2PS29 197 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 ERAL1O75616 437 aaKnown RBP18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 TGM1P22735 817 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 PEBP1P30086 187 aaKnown RBP18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 ERVK-21P61565 698 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 KRT33BQ14525 404 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 SLC9A5Q14940 896 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 TMEM35AQ53FP2 167 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 SLX4IPQ5VYV7 408 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 YAF2Q8IY57 180 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 TTLQ8NG68 377 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 C9orf43Q8TAL5 461 aaPredicted RBP18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 SUN3Q8TAQ9 357 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 CNRIP1Q96F85 164 aaPredicted RBP18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 CDADC1Q9BWV3 514 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 MKRN2Q9H000 416 aaKnown RBP18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 SLC6A17Q9H1V8 727 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 MMP27Q9H306 513 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 SPHK1Q9NYA1 384 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 GPSM3Q9Y4H4 160 aa18.45■□□□□ 0.54
CDC42EP1-201ENST00000249014 KRBA1A5PL33 1030 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 H3BN98 237 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 TPST2O60704 377 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 TP53P04637 393 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 EN2P19622 333 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 HIST1H1TP22492 207 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 TIE1P35590 1138 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 IGFALSP35858 605 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 CD97P48960 835 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 OLR1P78380 273 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 SGCGQ13326 291 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 DNASE1L3Q13609 305 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 ACOT4Q8N9L9 421 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 OR2L3Q8NG85 312 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 JPH3Q8WXH2 748 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 BBS4Q96RK4 519 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 MGLLQ99685 303 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 FAIM2Q9BWQ8 316 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 IGFLR1Q9H665 355 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 DNAJC27Q9NZQ0 273 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 SCHIP1Q9P0W5 487 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 KLHL20Q9Y2M5 609 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 A0A1W2PQU0 124 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 PDZK1P1A8MUH7 402 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 CACNB4O00305 520 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 CHRM4P08173 479 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 XKP51811 444 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 PPP5CP53041 499 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 UGT2B15P54855 530 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 SNRPGP62308 76 aaKnown RBP18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 RPS21P63220 83 aaKnown RBP18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 LSM11P83369 360 aaKnown RBP eCLIP18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 TARDBPQ13148 414 aaKnown RBP eCLIP18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 C12orf73Q69YU5 71 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 MRM1Q6IN84 353 aaKnown RBP18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 ABHD17CQ6PCB6 329 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 CACTIN-AS1Q8N1I8 211 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 WDR36Q8NI36 951 aaKnown RBP18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 SLC17A9Q9BYT1 436 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 C6orf62Q9GZU0 229 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 POLR2J3Q9H1A7 115 aaKnown RBP18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 MTIF3Q9H2K0 278 aaKnown RBP18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 FBXL12Q9NXK8 326 aa18.44■□□□□ 0.54
CDC42EP1-201ENST00000249014 UGT2B17O75795 530 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 C8orf89P0DMQ9 161 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 NTSP30990 170 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 GDI1P31150 447 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms