RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 TTMPQ5BVD1 217 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 ACER2Q5QJU3 275 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 H3F3CQ6NXT2 135 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 LINC00696Q6ZRV3 163 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 Q6ZSR9 355 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 RPS19BP1Q86WX3 136 aaKnown RBP10.51□□□□□ -0.73
SF3B6-201ENST00000233468 GALNT12Q8IXK2 581 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 LRRC34Q8IZ02 419 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 LRRC25Q8N386 305 aaPredicted RBP10.51□□□□□ -0.73
SF3B6-201ENST00000233468 FAM26EQ8N5C1 309 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 ZNF781Q8N8C0 355 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 NFAM1Q8NET5 270 aaPredicted RBP10.51□□□□□ -0.73
SF3B6-201ENST00000233468 CDC26Q8NHZ8 85 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 SLC2A12Q8TD20 617 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 LRRC8CQ8TDW0 803 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 PTPMT1Q8WUK0 201 aaPredicted RBP10.51□□□□□ -0.73
SF3B6-201ENST00000233468 PSMF1Q92530 271 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 HAS2Q92819 552 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 NCLNQ969V3 563 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 PNPLA2Q96AD5 504 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 TUBGCP3Q96CW5 907 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 FBXL20Q96IG2 436 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 EBPLQ9BY08 206 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 TUBB1Q9H4B7 451 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 MYNNQ9NPC7 610 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 SLAMF7Q9NQ25 335 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 HAO1Q9UJM8 370 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 MAPRE3Q9UPY8 281 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 CFL2Q9Y281 166 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 B3GNT3Q9Y2A9 372 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 CCL27Q9Y4X3 112 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 POLR3HQ9Y535 204 aaPredicted RBP10.51□□□□□ -0.73
SF3B6-201ENST00000233468 CLDN16Q9Y5I7 305 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 UNC79Q9P2D8 2635 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 TRAV17A0A0B4J275 112 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 OR6C76A6NM76 312 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 TGFBR3LH3BV60 316 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 LSM1O15116 133 aaKnown RBP10.5□□□□□ -0.73
SF3B6-201ENST00000233468 ITM2AO43736 263 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 PEX11AO75192 247 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 SKAP2O75563 359 aaPredicted RBP10.5□□□□□ -0.73
SF3B6-201ENST00000233468 PRKRAO75569 313 aaKnown RBP10.5□□□□□ -0.73
SF3B6-201ENST00000233468 LYPLA1O75608 230 aaPredicted RBP10.5□□□□□ -0.73
SF3B6-201ENST00000233468 BCAS2O75934 225 aaPredicted RBP10.5□□□□□ -0.73
SF3B6-201ENST00000233468 SLITRK5O94991 958 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 PRPS2P11908 318 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 NT5EP21589 574 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 NTSP30990 170 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 CD97P48960 835 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 KIAA0040Q15053 153 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 XKR7Q5GH72 579 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 LYPD8Q6UX82 237 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 SLC29A4Q7RTT9 530 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 R3HCC1LQ7Z5L2 792 aaKnown RBP10.5□□□□□ -0.73
SF3B6-201ENST00000233468 CRLF3Q8IUI8 442 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 ARFGAP2Q8N6H7 521 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 NATD1Q8N6N6 113 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 FNDC5Q8NAU1 212 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 APCDD1LQ8NCL9 501 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 OR7G1Q8NGA0 311 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 PPWD1Q96BP3 646 aaKnown RBP10.5□□□□□ -0.73
SF3B6-201ENST00000233468 ERP27Q96DN0 273 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 SENP5Q96HI0 755 aaPredicted RBP10.5□□□□□ -0.73
SF3B6-201ENST00000233468 BBS4Q96RK4 519 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 PRPF18Q99633 342 aaKnown RBP10.5□□□□□ -0.73
SF3B6-201ENST00000233468 UTP23Q9BRU9 249 aaKnown RBP10.5□□□□□ -0.73
SF3B6-201ENST00000233468 CNPPD1Q9BV87 410 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.5□□□□□ -0.73
SF3B6-201ENST00000233468 MED4Q9NPJ6 270 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 INTS9Q9NV88 658 aaKnown RBP10.5□□□□□ -0.73
SF3B6-201ENST00000233468 TAS2R7Q9NYW3 318 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 CES1P1Q9UKY3 287 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 NOTCH2Q04721 2471 aa10.5□□□□□ -0.73
SF3B6-201ENST00000233468 HIVEP3Q5T1R4 2406 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 PCSK5Q92824 1860 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 OR5H15A6NDH6 313 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 HDAC3O15379 428 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 SNNO75324 88 aaPredicted RBP10.49□□□□□ -0.73
SF3B6-201ENST00000233468 SASH3O75995 380 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 DDAH2O95865 285 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 ATP1B1P05026 303 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 CELA2AP08217 269 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 RNF224P0DH78 156 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 GNLYP22749 145 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 ARRB2P32121 409 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 HPCAL1P37235 193 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 GPR143P51810 404 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 ZNF267Q14586 743 aaPredicted RBP10.49□□□□□ -0.73
SF3B6-201ENST00000233468 PDCD2Q16342 344 aaPredicted RBP10.49□□□□□ -0.73
SF3B6-201ENST00000233468 RFTN2Q52LD8 501 aaPredicted RBP10.49□□□□□ -0.73
SF3B6-201ENST00000233468 C4orf17Q53FE4 359 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 HLA-DQA1Q5Y7H0 255 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 B3GNTL1Q67FW5 361 aaPredicted RBP10.49□□□□□ -0.73
SF3B6-201ENST00000233468 FAM71E1Q6IPT2 247 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 RNF111Q6ZNA4 994 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 Q6ZS92 163 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 GPALPP1Q8IXQ4 340 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 TMEM156Q8N614 296 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 OR2T11Q8NH01 316 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 NUBPLQ8TB37 319 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms