RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 AUP1Q9Y679 476 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 LOC102723532A0A0G2JNH3 316 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 INMT-MINDY4F8WBC2 141 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 SLC16A8O95907 504 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 GAAP10253 952 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 TUFMP49411 452 aaKnown RBP13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 ZNF157P51786 506 aaPredicted RBP13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 SMAD3P84022 425 aaKnown RBP13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 MRPL28Q13084 256 aaKnown RBP13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 IKZF1Q13422 519 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 IL18Q14116 193 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 MPPE1Q53F39 396 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 CD300LDQ6UXZ3 194 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 SLC7A13Q8TCU3 470 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 SLC38A5Q8WUX1 472 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 UFD1Q92890 307 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 UPF1Q92900 1129 aaKnown RBP eCLIP13.26□□□□□ -0.298e-8■■■■■ 56.4
SCNN1A-201ENST00000228916 NEIL2Q969S2 332 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 CREB3L1Q96BA8 519 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 MTERF3Q96E29 417 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 GPR137Q96N19 417 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 GFM1Q96RP9 751 aaKnown RBP13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 PRM3Q9NNZ6 103 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 ELF5Q9UKW6 265 aaPredicted RBP13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 CLEC4EQ9ULY5 219 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 TRDV1A0A1B0GX56 115 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 FOXE1O00358 373 aaPredicted RBP13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 QSOX1O00391 747 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 GREM1O60565 184 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 SOD1P00441 154 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 UQCRC2P22695 453 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 ANGPT1Q15389 498 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 SLC8B1Q6J4K2 584 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 FAM20CQ8IXL6 584 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 SLC37A3Q8NCC5 494 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 WDR48Q8TAF3 677 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 ADAMTS19Q8TE59 1207 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 FOXJ1Q92949 421 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 SENP5Q96HI0 755 aaPredicted RBP13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 A4GALTQ9NPC4 353 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 TMEM202A6NGA9 273 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 CACNB4O00305 520 aaPredicted RBP13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 CASKO14936 926 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 NPC1O15118 1278 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 AGFG1P52594 562 aaKnown RBP13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 TAS2R50P59544 299 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 TMPRSS11BQ86T26 416 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 RBM45Q8IUH3 476 aaKnown RBP13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 GHDCQ8N2G8 530 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 OR4D11Q8NGI4 311 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 GATAD2BQ8WXI9 593 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 CXorf36Q9H7Y0 433 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 NUP50Q9UKX7 468 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 PRELID1Q9Y255 219 aa13.26□□□□□ -0.29
SCNN1A-201ENST00000228916 OR5K3A6NET4 321 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 RFPL3O75679 317 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 BCHEP06276 602 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 ACP2P11117 423 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 HK1P19367 917 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 POLR2CP19387 275 aaPredicted RBP13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 HLA-FP30511 346 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 GIPRP48546 466 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 ATN1P54259 1190 aaPredicted RBP13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 BTG1P62324 171 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 RAB40BQ12829 278 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 COX10Q12887 443 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 GINS1Q14691 196 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 ACSM5Q6NUN0 579 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 KIAA1211LQ6NV74 962 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 ZNF485Q8NCK3 441 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 DMRT3Q9NQL9 472 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 MRPL39Q9NYK5 338 aaKnown RBP13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 GLTPQ9NZD2 209 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 CD84Q9UIB8 345 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 MOSPD1Q9UJG1 213 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 KCNE2Q9Y6J6 123 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 DNMT3AQ9Y6K1 912 aaPredicted RBP13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 PIPSLA2A3N6 862 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 ISM1B1AKI9 464 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 PER3P56645 1201 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 CYP4F8P98187 520 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 CDK5Q00535 292 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 LRRC73Q5JTD7 316 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 DEF8Q6ZN54 512 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 HS6ST3Q8IZP7 471 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 HORMAD2Q8N7B1 307 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 ARIH2OSQ8N7S6 290 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 LSMEM1Q8N8F7 131 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 OR8H1Q8NGG4 311 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 TMEM19Q96HH6 336 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 WFDC6Q9BQY6 131 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 ARHGAP9Q9BRR9 750 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 NLNQ9BYT8 704 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 SUV39H2Q9H5I1 410 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 MVB12BQ9H7P6 319 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 SEMA3GQ9NS98 782 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 ICKQ9UPZ9 632 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 ASB4Q9Y574 426 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 CASP8AP2Q9UKL3 1982 aa13.25□□□□□ -0.29
SCNN1A-201ENST00000228916 IRGMA1A4Y4 181 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms