RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 GLDCP23378 1020 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 RPS26P62854 115 aaKnown RBP12.65□□□□□ -0.38
COL1A1-201ENST00000225964 BTBD16Q32M84 506 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 PIGWQ7Z7B1 504 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 C12orf43Q96C57 262 aaKnown RBP12.65□□□□□ -0.38
COL1A1-201ENST00000225964 SLC30A2Q9BRI3 323 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 CWH43Q9H720 699 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 TRIM64CA6NLI5 447 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 ANKRD28O15084 1053 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 GSTT2P0CG29 244 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 ZNF33AQ06730 810 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 CEACAM19Q7Z692 300 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 TMPRSS12Q86WS5 348 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 OR6Q1Q8NGQ2 317 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 SLC17A9Q9BYT1 436 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 GPR32O75388 356 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 RPA4Q13156 261 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 MAB21L1Q13394 359 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 STK11Q15831 433 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 PLEKHN1Q494U1 663 aaPredicted RBP12.65□□□□□ -0.38
COL1A1-201ENST00000225964 MEDAGQ5VYS4 303 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 SMG8Q8ND04 991 aaKnown RBP12.65□□□□□ -0.38
COL1A1-201ENST00000225964 ADAMTS18Q8TE60 1221 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 NSUN5Q96P11 429 aaKnown RBP12.65□□□□□ -0.38
COL1A1-201ENST00000225964 PIP5K1AQ99755 562 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 TAS2R1Q9NYW7 299 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 A0A0A6YYH2 397 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 A6NJ64 397 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 FAM72CH0Y354 149 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 STC2O76061 302 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 ZNF28P17035 718 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 PTGS2P35354 604 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 ACVR1BP36896 505 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 PSPHP78330 225 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 KCNC4Q03721 635 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 TUBA3CQ13748 450 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 PTGR1Q14914 329 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 VMACQ2NL98 169 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 FAM72AQ5TYM5 149 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 OR52E8Q6IFG1 317 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 FAM72DQ6L9T8 149 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 FAM72BQ86X60 149 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 ZNF440Q8IYI8 595 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 SAMD12Q8N8I0 201 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 OR52E2Q8NGJ4 325 aa12.65□□□□□ -0.38
COL1A1-201ENST00000225964 TUBA8Q9NY65 449 aaPredicted RBP12.65□□□□□ -0.38
COL1A1-201ENST00000225964 A0A096LPI6 279 aa12.65□□□□□ -0.39
COL1A1-201ENST00000225964 EFR3AQ14156 821 aa12.65□□□□□ -0.39
COL1A1-201ENST00000225964 GRM7Q14831 915 aa12.65□□□□□ -0.39
COL1A1-201ENST00000225964 CES4AQ5XG92 561 aa12.65□□□□□ -0.39
COL1A1-201ENST00000225964 DPY19L4Q7Z388 723 aa12.65□□□□□ -0.39
COL1A1-201ENST00000225964 TRIB3Q96RU7 358 aa12.65□□□□□ -0.39
COL1A1-201ENST00000225964 ZNF382Q96SR6 550 aa12.65□□□□□ -0.39
COL1A1-201ENST00000225964 PLEKHA3Q9HB20 300 aa12.65□□□□□ -0.39
COL1A1-201ENST00000225964 EXTL2Q9UBQ6 330 aa12.65□□□□□ -0.39
COL1A1-201ENST00000225964 BORCS7-ASMTA0A0B4J1R7 106 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 ISPDA4D126 451 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 SHOXO15266 292 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 LSSP48449 732 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 FNTBP49356 437 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 COMTD1Q86VU5 262 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 OR9K2Q8NGE7 335 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 ZNF675Q8TD23 568 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 MRGPRX2Q96LB1 330 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 YTHDF1Q9BYJ9 559 aaKnown RBP12.64□□□□□ -0.39
COL1A1-201ENST00000225964 DUOX1Q9NRD9 1551 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 TRBV2A0A0J9YWF9 115 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 ABCB7O75027 752 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 RGS9O75916 674 aaPredicted RBP12.64□□□□□ -0.39
COL1A1-201ENST00000225964 ELK4P28324 431 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 SFTPDP35247 375 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 BMPR1AP36894 532 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 CD97P48960 835 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 NFE2L1Q14494 772 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 LIPKQ5VXJ0 399 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 SLC27A4Q6P1M0 643 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 PQLC3Q8N755 202 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 GALNT6Q8NCL4 622 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 DCBLD2Q96PD2 775 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 ZDHHC18Q9NUE0 388 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 IL20RAQ9UHF4 553 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 SIX4Q9UIU6 781 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 LOC102723532A0A0G2JNH3 316 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 HOXD8P13378 290 aaPredicted RBP12.64□□□□□ -0.39
COL1A1-201ENST00000225964 INCA1Q0VD86 236 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 AWAT2Q6E213 333 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 HACD2Q6Y1H2 254 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 GPRIN1Q7Z2K8 1008 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 HS6ST2Q96MM7 605 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 COPZ2Q9P299 210 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 UBE2J1Q9Y385 318 aaPredicted RBP12.64□□□□□ -0.39
COL1A1-201ENST00000225964 ZNF840PA6NDX5 716 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 TTLL8A6PVC2 850 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 ADRB3P13945 408 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 CD1DP15813 335 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 WDR4P57081 412 aaKnown RBP12.64□□□□□ -0.39
COL1A1-201ENST00000225964 ACTC1P68032 377 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 ACTA1P68133 377 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 ZBED5Q49AG3 693 aa12.64□□□□□ -0.39
COL1A1-201ENST00000225964 TRIM73Q86UV7 250 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms