RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 RLN3Q8WXF3 142 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 OR1E3Q8WZA6 343 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 TM4SF18Q96CE8 201 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 LINC00615Q96LM1 132 aaPredicted RBP9.44□□□□□ -0.9
USP11-201ENST00000218348 RBM14Q96PK6 669 aaKnown RBP9.44□□□□□ -0.9
USP11-201ENST00000218348 WFDC6Q9BQY6 131 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 MRPS30Q9NP92 439 aaKnown RBP9.44□□□□□ -0.9
USP11-201ENST00000218348 SLC6A14Q9UN76 642 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 PIAS3Q9Y6X2 628 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 MDC1Q14676 2089 aaKnown RBP9.44□□□□□ -0.9
USP11-201ENST00000218348 CACNB4O00305 520 aaPredicted RBP9.44□□□□□ -0.9
USP11-201ENST00000218348 RNASET2O00584 256 aaKnown RBP9.44□□□□□ -0.9
USP11-201ENST00000218348 TOR1BO14657 336 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 PCDH17O14917 1159 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 CRHBPP24387 322 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 BCL6P41182 706 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 GPR85P60893 370 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 RACK1P63244 317 aaKnown RBP9.44□□□□□ -0.9
USP11-201ENST00000218348 BNIP3Q12983 259 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 SELENBP1Q13228 472 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 LAIR2Q6ISS4 152 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 LCTLQ6UWM7 567 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 DEF8Q6ZN54 512 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 AHSA2Q719I0 299 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 SNX29P2Q8IUI4 249 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 SVOPLQ8N434 492 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 SLC5A8Q8N695 610 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 KCT2Q8NC54 265 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 OR2A1Q8NGT9 310 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 FCRL1Q96LA6 429 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 MAGEB10Q96LZ2 347 aaPredicted RBP9.44□□□□□ -0.9
USP11-201ENST00000218348 ROGDIQ9GZN7 287 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 BTNL2Q9UIR0 455 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.44□□□□□ -0.9
USP11-201ENST00000218348 A0A1W2PQF6 199 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 SYNDIG1LA6NDD5 238 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 FOXE1O00358 373 aaPredicted RBP9.44□□□□□ -0.9
USP11-201ENST00000218348 OR5F1O95221 314 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 PVRP15151 417 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 CERS1P27544 350 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 EXOC3L2Q2M3D2 409 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 NDUFAF5Q5TEU4 345 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 IRAK1BP1Q5VVH5 260 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 ZNF793Q6ZN11 406 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.44□□□□□ -0.98e-12■■■□□ 18
USP11-201ENST00000218348 LCN9Q8WX39 176 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 THAP11Q96EK4 314 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 CCDC120Q96HB5 630 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 HHIPQ96QV1 700 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 USB1Q9BQ65 265 aaKnown RBP9.44□□□□□ -0.9
USP11-201ENST00000218348 DOHHQ9BU89 302 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 TEX101Q9BY14 249 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 MS4A8Q9BY19 250 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 LHX9Q9NQ69 397 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 SNX5Q9Y5X3 404 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 TRBC2A0A5B9 178 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 GSAPA4D1B5 854 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 H0YAE9 185 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 SLC1A7O00341 560 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 PDPK1O15530 556 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 B4GALT2O60909 372 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 SOX14O95416 240 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 ADH1BP00325 375 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 RPN2P04844 631 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 HTR1AP08908 422 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 OR12D1P0DN82 309 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 DNAJA1P31689 397 aaKnown RBP9.43□□□□□ -0.9
USP11-201ENST00000218348 BSGP35613 385 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 ISL1P61371 349 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 RPP38P78345 283 aaKnown RBP9.43□□□□□ -0.9
USP11-201ENST00000218348 SYPL1Q16563 259 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 RGS21Q2M5E4 152 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 ZBED5Q49AG3 693 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 BROXQ5VW32 411 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 SHEQ5VZ18 495 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 ERICH5Q6P6B1 374 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 GALNT18Q6P9A2 607 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 SHQ1Q6PI26 577 aaKnown RBP9.43□□□□□ -0.9
USP11-201ENST00000218348 TMEM92Q6UXU6 159 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 TSEN54Q7Z6J9 526 aaKnown RBP9.43□□□□□ -0.9
USP11-201ENST00000218348 ZNF540Q8NDQ6 660 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 DNAJB8Q8NHS0 232 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 BBS4Q96RK4 519 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 NIPSNAP1Q9BPW8 284 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 BHLHE41Q9C0J9 482 aaPredicted RBP9.43□□□□□ -0.9
USP11-201ENST00000218348 RAD21L1Q9H4I0 556 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 NARFLQ9H6Q4 476 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 TM9SF3Q9HD45 589 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 MRPL39Q9NYK5 338 aaKnown RBP9.43□□□□□ -0.9
USP11-201ENST00000218348 AHSPQ9NZD4 102 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 NDUFAF4Q9P032 175 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 DAPK2Q9UIK4 370 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 AP3M1Q9Y2T2 418 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 A8MUA0 341 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 FRS3O43559 492 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 SLC28A2O43868 658 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 FAM20BO75063 409 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 IGFBP1P08833 259 aaPredicted RBP9.43□□□□□ -0.9
USP11-201ENST00000218348 ZNF12P17014 697 aa9.43□□□□□ -0.9
USP11-201ENST00000218348 PSMB9P28065 219 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms