RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 ZNF764Q96H86 408 aaPredicted RBP20.77■□□□□ 0.92
HOXC8-201ENST00000040584 RBM4BQ9BQ04 359 aaKnown RBP20.77■□□□□ 0.92
HOXC8-201ENST00000040584 INPP5KQ9BT40 448 aa20.77■□□□□ 0.92
HOXC8-201ENST00000040584 RBM4Q9BWF3 364 aaKnown RBP20.77■□□□□ 0.92
HOXC8-201ENST00000040584 PAIP1Q9H074 479 aaKnown RBP20.77■□□□□ 0.92
HOXC8-201ENST00000040584 IRF2BPLQ9H1B7 796 aa20.77■□□□□ 0.92
HOXC8-201ENST00000040584 COL5A1P20908 1838 aaPredicted RBP20.77■□□□□ 0.91
HOXC8-201ENST00000040584 MUC6Q6W4X9 2439 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 TRBV5-3A0A0A0MS03 114 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 GLOD5A6NK44 160 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 WASHC1A8K0Z3 465 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 SGK494L7N484 410 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 GDF9O60383 454 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 TBX19O60806 448 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 LRP3O75074 770 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 OR2B3O76000 313 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 GP1BAP07359 652 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 HOXB9P17482 250 aaPredicted RBP20.76■□□□□ 0.91
HOXC8-201ENST00000040584 DCKP27707 260 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 TOP3AQ13472 1001 aaPredicted RBP20.76■□□□□ 0.91
HOXC8-201ENST00000040584 MPEG1Q2M385 716 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 OTUD3Q5T2D3 398 aaPredicted RBP20.76■□□□□ 0.91
HOXC8-201ENST00000040584 C18orf63Q68DL7 685 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 TBPL2Q6SJ96 375 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 THAP5Q7Z6K1 395 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 STK32CQ86UX6 486 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 MSRB3Q8IXL7 192 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 SHISA5Q8N114 240 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 OR9A4Q8NGU2 314 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 OR1L3Q8NH93 324 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 CIDECQ96AQ7 238 aaPredicted RBP20.76■□□□□ 0.91
HOXC8-201ENST00000040584 SLC47A1Q96FL8 570 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 FAIM2Q9BWQ8 316 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 ANKHQ9HCJ1 492 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 SLC6A13Q9NSD5 602 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 DCAF13Q9NV06 445 aaKnown RBP20.76■□□□□ 0.91
HOXC8-201ENST00000040584 LYARQ9NX58 379 aaKnown RBP20.76■□□□□ 0.91
HOXC8-201ENST00000040584 SLC25A37Q9NYZ2 338 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 ERVK-11Q9UQG0 969 aa20.76■□□□□ 0.91
HOXC8-201ENST00000040584 D6RAR5 112 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 H3BMH7 237 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 RNASET2O00584 256 aaKnown RBP20.75■□□□□ 0.91
HOXC8-201ENST00000040584 GNGT2O14610 69 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 PROM1O43490 865 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 CBFA2T3O75081 653 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 CST1P01037 141 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 SOX11P35716 441 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 SPIDRQ14159 915 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 RFX4Q33E94 735 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 PHF19Q5T6S3 580 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 ANXA8L1Q5VT79 327 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 ZNF773Q6PK81 442 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 DNAJC14Q6Y2X3 702 aaPredicted RBP20.75■□□□□ 0.91
HOXC8-201ENST00000040584 CLECL1Q8IZS7 167 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 OR5T3Q8NGG3 340 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 OSBPL10Q9BXB5 764 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 ING2Q9H160 280 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 KAT8Q9H7Z6 458 aaKnown RBP20.75■□□□□ 0.91
HOXC8-201ENST00000040584 KCMF1Q9P0J7 381 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 BTNL2Q9UIR0 455 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 HCN4Q9Y3Q4 1203 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 CROCCQ5TZA2 2017 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 A0A0A6YYC8 382 aaPredicted RBP20.75■□□□□ 0.91
HOXC8-201ENST00000040584 A0A1B0GVG6 124 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 FITM1A5D6W6 292 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 I3L1I5 382 aaPredicted RBP20.75■□□□□ 0.91
HOXC8-201ENST00000040584 RFXANKO14593 260 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 PGRMC2O15173 223 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 NOL3O60936 208 aaKnown RBP20.75■□□□□ 0.91
HOXC8-201ENST00000040584 GUCY1B2O75343 617 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 AIFM1O95831 613 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 DRD2P14416 443 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 CDKN2CP42773 168 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 TRPC1P48995 793 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 LIM2P55344 173 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 GRM7Q14831 915 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 CLPPQ16740 277 aaPredicted RBP20.75■□□□□ 0.91
HOXC8-201ENST00000040584 NDUFA9Q16795 377 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 BROXQ5VW32 411 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 CALHM3Q86XJ0 350 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 SLITRK4Q8IW52 837 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 C8orf59Q8N0T1 100 aaPredicted RBP20.75■□□□□ 0.91
HOXC8-201ENST00000040584 VPS37AQ8NEZ2 397 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 C12orf43Q96C57 262 aaKnown RBP20.75■□□□□ 0.91
HOXC8-201ENST00000040584 FGF21Q9NSA1 209 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 IFT80Q9P2H3 777 aaPredicted RBP20.75■□□□□ 0.91
HOXC8-201ENST00000040584 DAPP1Q9UN19 280 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 PCDHB14Q9Y5E9 798 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 V9GYQ6 96 aa20.75■□□□□ 0.91
HOXC8-201ENST00000040584 EP300Q09472 2414 aaPredicted RBP20.74■□□□□ 0.91
HOXC8-201ENST00000040584 FOXS1O43638 330 aa20.74■□□□□ 0.91
HOXC8-201ENST00000040584 ABHD18Q0P651 414 aa20.74■□□□□ 0.91
HOXC8-201ENST00000040584 CCDC157Q569K6 752 aa20.74■□□□□ 0.91
HOXC8-201ENST00000040584 PRAMEF17Q5VTA0 474 aa20.74■□□□□ 0.91
HOXC8-201ENST00000040584 KCTD8Q6ZWB6 473 aa20.74■□□□□ 0.91
HOXC8-201ENST00000040584 B3GNT8Q7Z7M8 397 aa20.74■□□□□ 0.91
HOXC8-201ENST00000040584 OFCC1Q8IZS5 231 aa20.74■□□□□ 0.91
HOXC8-201ENST00000040584 EID3Q8N140 333 aa20.74■□□□□ 0.91
HOXC8-201ENST00000040584 OR5K1Q8NHB7 308 aa20.74■□□□□ 0.91
HOXC8-201ENST00000040584 HDAC2Q92769 488 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms