RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Sema4fQ9Z123 777 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Rhox2dW4VSN9 191 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Catsperg1E9Q355 1151 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Hbb-bh1P04444 147 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 KitlgP20826 273 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Abcb1aP21447 1276 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Vat1Q62465 406 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Crtc1Q68ED7 630 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Dusp23Q6NT99 150 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 RhbgQ8BUX5 455 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Plekhs1Q8BW88 474 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Sall4Q8BX22 1067 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Q9CWU4 180 aaKnown RBP10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Zdhhc4Q9D6H5 343 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Bmp10Q9R229 421 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Frmpd3A0A140LIW3 1774 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Znf536Q8K083 1302 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm14496K7N5U4 849 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 S1pr1O08530 382 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Sap18O55128 153 aaKnown RBP10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Grap2O89100 322 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Serpinf2Q61247 491 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Itih5Q8BJD1 952 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Peli2Q8BST6 419 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Q9CZV2 255 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Tp53bp1P70399 1969 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Lrp5Q91VN0 1614 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm14085A2AWR5 660 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Fam71f2B2RXB0 297 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Vmn2r115E9Q0E7 857 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 PitpnbP53811 271 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Lefty2P57785 368 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Rps13P62301 151 aaKnown RBP10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Hspb6Q5EBG6 162 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 JrkQ60976 557 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Vamp1Q62442 118 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr1046Q7TR79 316 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Chmp1aQ921W0 196 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr31E9Q3K2 317 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm3327F7C9A1 213 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm10338K7N692 204 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gp1baO35930 734 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Rnf13O54965 381 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 EdnrbP48302 442 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Dag1Q62165 893 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Ncr1Q8C567 325 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Q8K039 155 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Dnajc18Q9CZJ9 357 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 FtmtQ9D5H4 237 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Arr3Q9EQP6 381 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Nectin1Q9JKF6 515 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr1160A2AVT0 319 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Hsd11b1P50172 292 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Fmo5P97872 533 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Macrod2Q3UYG8 475 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Pramef8Q8CE24 480 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Snx11Q91WL6 271 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Pcdhb20Q91XZ9 799 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Znf518bB2RRE4 1077 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Opn1mwO35599 359 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cd14P10810 366 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cnn2Q08093 305 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr651Q8VG78 313 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 AhspQ9CY02 102 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Tspan4Q9DCK3 238 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Slc9a5B2RXE2 898 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cdc25bP30306 576 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Lim2P56563 173 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Grxcr2Q3TYR5 254 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 C130050O18RikQ497Y9 356 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Rxfp3Q8BGE9 472 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 NrrosQ8BMT4 693 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr382Q8VF79 312 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Edem1Q925U4 652 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Mrps14Q9CR88 128 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Nxnl2Q9D531 156 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm12800B1AUV4 484 aa10.02□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Esp34G3UXG0 151 aa10.02□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Sypl1O09117 261 aa10.02□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Camk2dQ6PHZ2 499 aa10.02□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm4846B2RWH8 538 aa10.02□□□□□ -0.8
Scn8a-201ENSMUST00000082209 PtprhE9Q0N2 971 aa10.02□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm21915J3QPM7 133 aa10.02□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Pim3P58750 326 aa10.02□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Isg20l2Q3U1G5 368 aaKnown RBP10.02□□□□□ -0.8
Scn8a-201ENSMUST00000082209 GanabQ8BHN3 944 aaKnown RBP10.02□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Micu1Q8VCX5 477 aa10.02□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Grip1Q925T6 1127 aa10.02□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Kdelr2Q9CQM2 212 aa10.02□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Eif4e3Q9DBB5 207 aa10.02□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Xrn2Q9DBR1 951 aaKnown RBP10.02□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Spint1Q9R097 507 aa10.02□□□□□ -0.8
Scn8a-201ENSMUST00000082209 PtgfrnQ9WV91 879 aa10.02□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Scgb1b30A2BH64 92 aa10.02□□□□□ -0.81
Scn8a-201ENSMUST00000082209 FgaE9PV24 789 aa10.02□□□□□ -0.81
Scn8a-201ENSMUST00000082209 IduaP48441 634 aa10.02□□□□□ -0.81
Scn8a-201ENSMUST00000082209 Kcnab2P62482 367 aa10.02□□□□□ -0.81
Scn8a-201ENSMUST00000082209 Sec24aQ3U2P1 1090 aa10.02□□□□□ -0.81
Scn8a-201ENSMUST00000082209 Pou6f2Q8BJI4 691 aa10.02□□□□□ -0.81
Scn8a-201ENSMUST00000082209 5430401F13RikE9Q328 175 aa10.02□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms