RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Acot7Q91V12 381 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Exosc1Q9DAA6 195 aaKnown RBP9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 HaghlQ9DB32 283 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Sphk2Q9JIA7 617 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Bloc1s6Q9R0C0 172 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 AgtrapQ9WVK0 161 aa9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 MylkQ6PDN3 1941 aaKnown RBP9.33□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Gm29776A0A286YEC0 699 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Gm6710A2ART0 554 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Olfr694K7N641 315 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Slc7a2P18581 657 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 DcnP28654 354 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 GlaP51569 419 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 OcmP51879 109 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Tlx2Q61663 284 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Cxcl3Q6W5C0 100 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Olfr1045Q7TR80 315 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 PisdQ8BSF4 406 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 E330021D16RikQ8BW45 371 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Sirt5Q8K2C6 310 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Ppil1Q9D0W5 166 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Creb3l4Q9D2A5 370 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Dpysl5Q9EQF6 564 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Tsc22d3Q9Z2S7 137 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Elf4Q9Z2U4 655 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Tp53bp1P70399 1969 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Atp6ap1lD3Z5W0 336 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Gm2956E9PVJ0 216 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Gm5796E9Q7M8 205 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 5730507C01RikJ3QPX0 416 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Zfp934K7N6H3 473 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Gm3629K7N6Y2 205 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Gm10340K7N708 205 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Gm8108K7N734 216 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Sbk2P0C5K1 362 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Nid1P10493 1245 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 GypaP14220 168 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Ppm1bP36993 390 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 BckdhaP50136 442 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 VegfcP97953 415 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Upf3aQ3ULJ3 422 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Gm11992Q5SS90 291 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Clec4a4Q5YIR8 236 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Commd7Q8BG94 200 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Ubash3bQ8BGG7 638 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 4933430I17RikQ8BHW4 495 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Ffar2Q8VCK6 330 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Grip1Q925T6 1127 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Gpr146Q99LE2 333 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Uck2Q99PM9 261 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Khdc3Q9CWU5 440 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Exosc7Q9D0M0 291 aaKnown RBP9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Ebna1bp2Q9D903 306 aaKnown RBP9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Lpar3Q9EQ31 354 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Gm5072A2AHM1 344 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Tex264E9Q137 309 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Gm6401L7N2C0 213 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Efna3O08545 230 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Phox2bO35690 314 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Atxn2O70305 1285 aaKnown RBP9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Hmgn1P18608 96 aaKnown RBP9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Atp6v1e1P50518 226 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Nell1Q2VWQ2 810 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Myl12bQ3THE2 172 aaKnown RBP9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Ccdc177Q3UHB8 706 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Itgb2lQ3UV74 738 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Zdhhc20Q5Y5T1 380 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 CrhbpQ60571 322 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Rbbp4Q60972 425 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Slc29a2Q61672 456 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Awat2Q6E1M8 333 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Vangl1Q80Z96 526 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 1700001K19RikQ80ZT1 219 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Znf750Q8BH05 703 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 EloaQ8CB77 773 aaKnown RBP9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Nudt6Q8CH40 313 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 FbrsQ8R089 466 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 NotumQ8R116 503 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Olfr450Q8VF81 310 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Olfr1302Q8VGE9 315 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Olfr170Q8VGL6 313 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Olfr586Q8VH13 317 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Dusp7Q91Z46 422 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Mrgprb4Q91ZC0 321 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Hspa14Q99M31 509 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Cyp4f15Q99N18 534 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Hspb11Q9D6H2 143 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Tvp23bQ9D8T4 205 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Sema4gQ9WUH7 837 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Kcnk7Q9Z2T1 307 aa9.32□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Zfp969A2ART2 485 aa9.31□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Nxpe3B9EKK6 559 aa9.31□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Ap1arE9PYF7 298 aa9.31□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Pcbp3P57722 371 aaKnown RBP9.31□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Slc16a3P57787 470 aa9.31□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 PdxpP60487 292 aa9.31□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Hist2h2aa1Q6GSS7 130 aaKnown RBP9.31□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Osgepl1Q6PEB4 414 aa9.31□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Olfr744Q7TRM0 323 aa9.31□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Gpr62Q80UC6 358 aa9.31□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 57.4 ms