RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Dcaf4A0A1Y7VNZ0 532 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm29776A0A286YEC0 699 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm14781A2A9Q9 366 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm5072A2AHM1 344 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Trgv2A2J008 116 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr619E9PV95 320 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 E9Q0B3 247 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Sbk2P0C5K1 362 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 ChrneP20782 493 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Hsf2P38533 535 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Etv1P41164 477 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Adra2aQ01338 450 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 PrkczQ02956 592 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 MamstrQ0ZCJ7 421 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Mageb5Q14AN0 366 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm5460Q3UQ97 254 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ccdc185Q3V118 621 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Spata13Q5DU57 656 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Bpifb1Q61114 474 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Nadsyn1Q711T7 725 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Q80Y39 304 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 GanabQ8BHN3 944 aaKnown RBP12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Slc15a3Q8BPX9 578 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 IlvblQ8BU33 632 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 SprnQ8BWU1 147 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gatad2aQ8CHY6 629 aaKnown RBP12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Bclaf1Q8K019 919 aaKnown RBP12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Kcnc4Q8R1C0 628 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr666Q8VH00 318 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Vmn1r51Q8VIC6 319 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Mapk8Q91Y86 384 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Camk1Q91YS8 374 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Uck2Q99PM9 261 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Etv5Q9CXC9 510 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Plekhj1Q9D240 164 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Jph3Q9ET77 744 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Upk3aQ9JKX8 287 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 HraslsQ9QZU4 167 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 CN725425A0A087WRU1 652 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Prr36E9PV26 1098 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Glyatl3E9Q5L8 290 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm3138K7N754 218 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Pdlim1O70400 327 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 F2rl3O88634 396 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 NogP97466 232 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ugt2b36Q3UEP4 530 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ccser2Q3UHI0 833 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Sgk494Q5SYL1 278 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Rbbp4Q60972 425 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Tlx2Q61663 284 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 OgnQ62000 298 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Tas2r117Q7M715 330 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Fam210aQ8BGY7 273 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Cxcl16Q8BSU2 246 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Znf786Q8BV42 777 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Zbtb9Q8CDC7 459 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Cdc123Q8CII2 336 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 AspaQ8R3P0 312 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr633Q8VF02 312 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr1276Q8VF40 312 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Pcdhac1Q91Y10 964 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 TympQ99N42 471 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm16286Q9CQX6 220 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 TheglQ9DA15 459 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr706Q9EPF8 316 aa12.79□□□□□ -0.36
Nup88-201ENSMUST00000035283 Zfp472B0V2W5 534 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm3149E9PW52 257 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 PtprhE9Q0N2 971 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm8362K7N6Y6 257 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Chst3O88199 472 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Limk1P53668 647 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 SnrpgP62309 76 aaKnown RBP12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Snrpd2P62317 118 aaKnown RBP12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Cd244Q07763 397 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Treml4Q3LRV9 263 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Trpc5osQ3UHV4 110 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Arhgap22Q8BL80 702 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Yipf6Q8BR70 236 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gpr26Q8BZA7 337 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Sertm1Q8CD78 107 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Rnf121Q8R1Z9 327 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Camkk1Q8VBY2 505 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Rdh10Q8VCH7 341 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Asb16Q8VHS5 453 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Abcg4Q91WA9 646 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Cd209aQ91ZX1 238 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Sh3bp4Q921I6 962 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Tvp23bQ9D8T4 205 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Mbd3l1Q9D9H3 186 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Jph1Q9ET80 660 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Kcnd3Q9Z0V1 655 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Uba2Q9Z1F9 638 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Krt28A6BLY7 462 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Rgs5O08850 181 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Atxn2O70305 1285 aaKnown RBP12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ubl4aP21126 157 aaKnown RBP12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Zic1P46684 447 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Slc16a3P57787 470 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Snrpd1P62315 119 aaKnown RBP12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Rad51Q08297 339 aa12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 44.6 ms