RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Nmnat1Q9EPA7 285 aa13.43□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Hey1Q9WV93 299 aa13.43□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Gm28710A0A1B0GR31 962 aa13.43□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Olfr1084A0A1L1STZ9 313 aa13.43□□□□□ -0.26
Col5a1-201ENSMUST00000028280 BlkP16277 499 aa13.43□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Gabra6P16305 453 aa13.43□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Slc10a3P21129 473 aa13.43□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Gdi1P50396 447 aa13.43□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Psg29Q3URN6 468 aa13.43□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Fam173aQ501J2 229 aa13.43□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Ube2j2Q6P073 259 aa13.43□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Cnot4Q8BT14 575 aaKnown RBP13.43□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Rnf130Q8VEM1 419 aa13.43□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Eps8l3Q91WL0 600 aa13.43□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Dcp1aQ91YD3 602 aa13.43□□□□□ -0.26
Col5a1-201ENSMUST00000028280 HaghQ99KB8 309 aa13.43□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Lrrc31F6VYM1 502 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Tmigd3G3X8R9 209 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 PipP02816 146 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Ufm1P61961 85 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 HnrnpkP61979 463 aaKnown RBP13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Pde7aP70453 456 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Rnf215Q5SPX3 379 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Pou4f2Q63934 411 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 SowahaQ8BLS7 548 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Zdhhc13Q9CWU2 622 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Brix1Q9DCA5 353 aaKnown RBP13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Bace2Q9JL18 514 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Dusp13Q9QYJ7 198 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Bex3Q9WTZ9 124 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Rd3lB2RV38 197 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Htr2aP35363 471 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 FhP97807 507 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Zc3h12aQ5D1E7 596 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Eri3Q8C460 337 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Ppa2Q91VM9 330 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Pycr2Q922Q4 320 aaKnown RBP13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Chrm3Q9ERZ3 589 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Pard6gQ9JK84 382 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 RhcgQ9QXP0 498 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Cntnap5aQ0V8T9 1304 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Olfr773F6VS78 311 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 S1pr1O08530 382 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 St3gal1P54751 337 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Nr4a2Q06219 598 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Rbm15Q0VBL3 962 aaKnown RBP13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Kdelr3Q8R1L4 214 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Olfr772Q8VGC5 311 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Mthfd1Q922D8 935 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Tktl1Q99MX0 595 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Q9CZV2 255 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Olfr1215A3KGY3 312 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Nxpe3B9EKK6 559 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Prss56F2YMG0 604 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Zfp955bL7N232 545 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Plpp4Q0VBU9 271 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Ndrg1Q62433 394 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Slc22a18Q78KK3 406 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 C1raQ8CG16 707 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Gfm1Q8K0D5 751 aaKnown RBP13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Trib2Q8K4K3 343 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Olfr437Q8VEV1 310 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Olfr1141Q8VFQ7 311 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Olfr133Q8VG94 312 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Cdkal1Q91WE6 578 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Pus10Q9D3U0 527 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Cry2Q9R194 592 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Cd70O55237 195 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Dpf3P58269 378 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Myoz3Q8R4E4 245 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Adgrl4Q923X1 739 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 4933421I07RikQ9D420 214 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Vmn2r18E9Q280 788 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Mtco2P00405 227 aaKnown RBP13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Arhgap39P59281 1107 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 OclnQ61146 521 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Kcnip4Q6PHZ8 250 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 RgccQ9DBX1 137 aa13.42□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Trbv4A0A075B5I2 113 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Actl10A2AKE7 346 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Klhdc7aA2APT9 773 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Vmn2r54K7N649 806 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 JrkQ60976 557 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 9130023H24RikQ8BG98 337 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Mitd1Q8VDV8 249 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Lmx1aQ9JKU8 382 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Mbd4Q9Z2D7 554 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Ifi204P0DOV2 619 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Apex1P28352 317 aaKnown RBP13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Mccc2Q3ULD5 563 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Snx21Q3UR97 363 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Vtcn1Q7TSP5 283 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Agbl2Q8CDK2 862 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Ccdc58Q8R3Q6 144 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Olfr382Q8VF79 312 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Olfr1351Q8VGU6 319 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 St3gal4Q91Y74 333 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Fcf1Q9CTH6 198 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Slc43a3A2AVZ9 502 aa13.41□□□□□ -0.26
Col5a1-201ENSMUST00000028280 F6Y6L6 278 aa13.41□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 72.4 ms