RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Gm12695A2AGB2 545 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ralgps1A2AR50 585 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Vmn2r12L7N217 831 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Tssk2O54863 358 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Nsg2P47759 171 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Stard6P59096 233 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Wdr5P61965 334 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Q3KQP7 184 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Larp4bQ6A0A2 741 aaKnown RBP16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Bnc2Q8BMQ3 1127 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Fbxw14Q8C2Y5 466 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ssuh2Q8C3L1 340 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Recql5Q8VID5 982 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Slc39a5Q9D856 535 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Jph1Q9ET80 660 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Epm2aQ9WUA5 330 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Tp53bp1P70399 1969 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Pdzd8B9EJ80 1147 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Cd86P42082 309 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Cdk5P49615 292 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Opn1swP51491 346 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 D13Ertd608eQ3UPR8 151 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Dag1Q62165 893 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Nox3Q672J9 568 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 C5ar2Q8BW93 344 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Agfg1Q8K2K6 561 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr1226Q8VGM5 310 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Stx11Q9D3G5 287 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Tmem41aQ9D8U2 264 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Fgf22Q9ESS2 162 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Oas1eA0A0J9YV76 386 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Gm21319F6YNI8 144 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 H2-AaP01910 256 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ruvbl1P60122 456 aaKnown RBP16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 TigitP86176 249 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Dusp5Q1HL35 384 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Tex10Q3URQ0 928 aaKnown RBP16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Usp17laQ61068 526 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 WdcpQ6NV72 663 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Oog2Q7TPX8 476 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ppm1nQ8BGL1 404 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Tmem220Q8BP07 167 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Slc26a9Q8BU91 790 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Znf322Q8BZ89 410 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 ExogQ8C163 368 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr769Q8K501 312 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Blzf1Q8R2X8 403 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ttc36Q8VBW8 186 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Katnbl1Q9CWJ3 299 aa16.05■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ddi2A2ADY9 399 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Gm20431E9PY39 371 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr631F8VPJ9 319 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Dscr3O35075 297 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 SrgnP13609 152 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Fbxl19Q6PB97 674 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Nacc1Q7TSZ8 514 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr1387Q8VFA9 311 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr48Q8VGN4 301 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Fads1Q920L1 447 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Mrpl19Q9D338 292 aaKnown RBP16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 2610021A01RikE9Q0Q3 834 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Cnih2O35089 160 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 NlkO54949 527 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Serpina7P61939 418 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ostf1Q62422 215 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ppp3r1Q63810 170 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Poldip3Q8BG81 420 aaKnown RBP16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Cpsf4Q8BQZ5 211 aaKnown RBP16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Vmn1r188Q8K3N2 308 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Slc22a22Q8R0S9 554 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Rfc3Q8R323 356 aaKnown RBP16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ppil1Q9D0W5 166 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Chp2Q9D869 196 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Isoc2bQ9DCC7 210 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Wfdc1Q9ESH5 211 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Khdrbs3Q9R226 346 aaKnown RBP16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Xpnpep2B1AVD1 674 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr171G5E8J1 314 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Aldh3b3J3QMK6 479 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Vmn2r117K7N6V1 857 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 P01667 111 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Fgf11P70378 225 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 VegfcP97953 415 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 TefmQ5SSK3 364 aaKnown RBP16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 TCAIMQ66JZ4 499 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr1101Q7TR59 310 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr128Q7TRJ1 308 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ubash3bQ8BGG7 638 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr99Q8VFE4 305 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Raf1Q99N57 648 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Q9D454 513 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Efhc2Q9D485 750 aa16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Celf2Q9Z0H4 508 aaKnown RBP16.04■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Mcm3apQ9WUU9 1971 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 BC034090A0A087WP46 1202 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Slc22a28B2RT89 552 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ephb6O08644 1014 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ctla2bP12400 113 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 CryaaP24622 196 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Tekt4Q149S1 447 aa16.03■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms