RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 RIC3Q7Z5B4 369 aa15.68■□□□□ 0.1
LINC00339-213ENST00000642137 ARXQ96QS3 562 aa15.68■□□□□ 0.1
LINC00339-213ENST00000642137 NARFQ9UHQ1 456 aa15.68■□□□□ 0.1
LINC00339-213ENST00000642137 TBC1D2BQ9UPU7 963 aa15.68■□□□□ 0.1
LINC00339-213ENST00000642137 MAP3K15Q6ZN16 1313 aa15.68■□□□□ 0.1
LINC00339-213ENST00000642137 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.67■□□□□ 0.1
LINC00339-213ENST00000642137 PI4KAP2A4QPH2 592 aa15.67■□□□□ 0.1
LINC00339-213ENST00000642137 RFC4P35249 363 aa15.67■□□□□ 0.1
LINC00339-213ENST00000642137 AMIGO3Q86WK7 504 aa15.67■□□□□ 0.1
LINC00339-213ENST00000642137 PI4KAP1Q8N8J0 262 aa15.67■□□□□ 0.1
LINC00339-213ENST00000642137 ANO8Q9HCE9 1232 aaPredicted RBP15.67■□□□□ 0.1
LINC00339-213ENST00000642137 ZPR1O75312 459 aa15.66■□□□□ 0.1
LINC00339-213ENST00000642137 RRP1P56182 461 aaKnown RBP15.66■□□□□ 0.1
LINC00339-213ENST00000642137 CLEC4GQ6UXB4 293 aa15.66■□□□□ 0.1
LINC00339-213ENST00000642137 SMIM5Q71RC9 77 aa15.66■□□□□ 0.1
LINC00339-213ENST00000642137 DNAAF4Q8WXU2 420 aa15.66■□□□□ 0.1
LINC00339-213ENST00000642137 PLIN1O60240 522 aa15.65■□□□□ 0.1
LINC00339-213ENST00000642137 PHF14O94880 888 aa15.65■□□□□ 0.1
LINC00339-213ENST00000642137 CAMTA2O94983 1202 aa15.65■□□□□ 0.1
LINC00339-213ENST00000642137 TRIM27P14373 513 aa15.65■□□□□ 0.1
LINC00339-213ENST00000642137 GIGYF2Q6Y7W6 1299 aaKnown RBP15.65■□□□□ 0.1
LINC00339-213ENST00000642137 COL23A1Q86Y22 540 aaPredicted RBP15.65■□□□□ 0.1
LINC00339-213ENST00000642137 METTL22Q9BUU2 404 aaPredicted RBP15.65■□□□□ 0.1
LINC00339-213ENST00000642137 MAP3K2Q9Y2U5 619 aa15.65■□□□□ 0.1
LINC00339-213ENST00000642137 QSER1Q2KHR3 1735 aa15.65■□□□□ 0.1
LINC00339-213ENST00000642137 PNPLA7Q6ZV29 1317 aa15.65■□□□□ 0.1
LINC00339-213ENST00000642137 ADCY9O60503 1353 aa15.64■□□□□ 0.09
LINC00339-213ENST00000642137 TCIRG1Q13488 830 aa15.64■□□□□ 0.09
LINC00339-213ENST00000642137 PDE3AQ14432 1141 aa15.64■□□□□ 0.09
LINC00339-213ENST00000642137 HLFQ16534 295 aa15.64■□□□□ 0.09
LINC00339-213ENST00000642137 HSP90AB3PQ58FF7 597 aa15.64■□□□□ 0.09
LINC00339-213ENST00000642137 ZBTB3Q9H5J0 574 aa15.64■□□□□ 0.09
LINC00339-213ENST00000642137 USP42Q9H9J4 1324 aaKnown RBP15.64■□□□□ 0.09
LINC00339-213ENST00000642137 F6X3S4 739 aa15.63■□□□□ 0.09
LINC00339-213ENST00000642137 USPL1Q5W0Q7 1092 aa15.63■□□□□ 0.09
LINC00339-213ENST00000642137 DZIP1LQ8IYY4 767 aaKnown RBP15.63■□□□□ 0.09
LINC00339-213ENST00000642137 ZNF652Q9Y2D9 606 aa15.63■□□□□ 0.09
LINC00339-213ENST00000642137 NUP98P52948 1817 aa15.63■□□□□ 0.09
LINC00339-213ENST00000642137 TUBGCP6Q96RT7 1819 aa15.62■□□□□ 0.09
LINC00339-213ENST00000642137 SOCS7O14512 581 aa15.62■□□□□ 0.09
LINC00339-213ENST00000642137 NEXNQ0ZGT2 675 aa15.62■□□□□ 0.09
LINC00339-213ENST00000642137 BCL2L12Q9HB09 334 aa15.62■□□□□ 0.09
LINC00339-213ENST00000642137 SRP68Q9UHB9 627 aaKnown RBP15.62■□□□□ 0.09
LINC00339-213ENST00000642137 ABCC4O15439 1325 aa15.62■□□□□ 0.09
LINC00339-213ENST00000642137 MSH5O43196 834 aa15.61■□□□□ 0.09
LINC00339-213ENST00000642137 CCT4P50991 539 aaKnown RBP15.61■□□□□ 0.09
LINC00339-213ENST00000642137 TRIM28Q13263 835 aaKnown RBP15.61■□□□□ 0.09
LINC00339-213ENST00000642137 BEND3Q5T5X7 828 aa15.61■□□□□ 0.09
LINC00339-213ENST00000642137 INTS3Q68E01 1043 aaKnown RBP15.61■□□□□ 0.09
LINC00339-213ENST00000642137 SLC4A10Q6U841 1118 aa15.61■□□□□ 0.09
LINC00339-213ENST00000642137 FTSJ3Q8IY81 847 aaKnown RBP15.61■□□□□ 0.09
LINC00339-213ENST00000642137 ZNF34Q8IZ26 560 aa15.61■□□□□ 0.09
LINC00339-213ENST00000642137 LINS1Q8NG48 757 aa15.61■□□□□ 0.09
LINC00339-213ENST00000642137 CLUAP1Q96AJ1 413 aa15.61■□□□□ 0.09
LINC00339-213ENST00000642137 MYD88Q99836 296 aa15.61■□□□□ 0.09
LINC00339-213ENST00000642137 ISCA1Q9BUE6 129 aa15.61■□□□□ 0.09
LINC00339-213ENST00000642137 TNNQ9UQP3 1299 aa15.61■□□□□ 0.09
LINC00339-213ENST00000642137 C4AP0C0L4 1744 aa15.6■□□□□ 0.09
LINC00339-213ENST00000642137 ARFGEF2Q9Y6D5 1785 aa15.6■□□□□ 0.09
LINC00339-213ENST00000642137 ALDH1L1O75891 902 aa15.6■□□□□ 0.09
LINC00339-213ENST00000642137 GYS1P13807 737 aa15.6■□□□□ 0.09
LINC00339-213ENST00000642137 NLGN1Q8N2Q7 840 aa15.6■□□□□ 0.09
LINC00339-213ENST00000642137 SLC16A10Q8TF71 515 aa15.6■□□□□ 0.09
LINC00339-213ENST00000642137 ATP10DQ9P241 1426 aa15.6■□□□□ 0.09
LINC00339-213ENST00000642137 BCORQ6W2J9 1755 aa15.59■□□□□ 0.09
LINC00339-213ENST00000642137 RLBP1P12271 317 aa15.59■□□□□ 0.09
LINC00339-213ENST00000642137 TMEM57Q8N5G2 664 aa15.59■□□□□ 0.09
LINC00339-213ENST00000642137 SRCIN1Q9C0H9 1055 aa15.59■□□□□ 0.09
LINC00339-213ENST00000642137 PXDNLA1KZ92 1463 aa15.59■□□□□ 0.09
LINC00339-213ENST00000642137 IGKV5-2P06315 115 aa15.58■□□□□ 0.08
LINC00339-213ENST00000642137 C20orf194Q5TEA3 1177 aa15.58■□□□□ 0.08
LINC00339-213ENST00000642137 CCDC191Q8NCU4 936 aa15.58■□□□□ 0.08
LINC00339-213ENST00000642137 PANK1Q8TE04 598 aa15.58■□□□□ 0.08
LINC00339-213ENST00000642137 IBTKQ9P2D0 1353 aaPredicted RBP15.58■□□□□ 0.08
LINC00339-213ENST00000642137 NEURL1BA8MQ27 555 aa15.57■□□□□ 0.08
LINC00339-213ENST00000642137 ATP5J2-PTCD1G3V325 749 aa15.57■□□□□ 0.08
LINC00339-213ENST00000642137 TM4SF1P30408 202 aa15.57■□□□□ 0.08
LINC00339-213ENST00000642137 FKBP8Q14318 412 aa15.57■□□□□ 0.08
LINC00339-213ENST00000642137 R3HDM1Q15032 1099 aaKnown RBP15.57■□□□□ 0.08
LINC00339-213ENST00000642137 PARP10Q53GL7 1025 aa15.57■□□□□ 0.08
LINC00339-213ENST00000642137 TBC1D9BQ66K14 1250 aa15.57■□□□□ 0.08
LINC00339-213ENST00000642137 SETDB2Q96T68 719 aa15.57■□□□□ 0.08
LINC00339-213ENST00000642137 NIP7Q9Y221 180 aaKnown RBP eCLIP15.57■□□□□ 0.08
LINC00339-213ENST00000642137 SCN7AQ01118 1682 aa15.57■□□□□ 0.08
LINC00339-213ENST00000642137 MVPQ14764 893 aaKnown RBP15.56■□□□□ 0.08
LINC00339-213ENST00000642137 CWF19L2Q2TBE0 894 aaKnown RBP15.56■□□□□ 0.08
LINC00339-213ENST00000642137 NLRP10Q86W26 655 aa15.56■□□□□ 0.08
LINC00339-213ENST00000642137 CWC25Q9NXE8 425 aaPredicted RBP15.56■□□□□ 0.08
LINC00339-213ENST00000642137 ANKRD36CQ5JPF3 1778 aa15.56■□□□□ 0.08
LINC00339-213ENST00000642137 GPTP24298 496 aa15.55■□□□□ 0.08
LINC00339-213ENST00000642137 GCKRQ14397 625 aa15.55■□□□□ 0.08
LINC00339-213ENST00000642137 NFIXQ14938 502 aa15.55■□□□□ 0.08
LINC00339-213ENST00000642137 PPP1R42Q7Z4L9 355 aa15.55■□□□□ 0.08
LINC00339-213ENST00000642137 CHMP4BQ9H444 224 aaKnown RBP15.55■□□□□ 0.08
LINC00339-213ENST00000642137 COG6Q9Y2V7 657 aa15.55■□□□□ 0.08
LINC00339-213ENST00000642137 BICDL1Q6ZP65 573 aa15.54■□□□□ 0.08
LINC00339-213ENST00000642137 ITPRIPQ8IWB1 547 aa15.54■□□□□ 0.08
LINC00339-213ENST00000642137 PDGFDQ9GZP0 370 aaPredicted RBP15.54■□□□□ 0.08
LINC00339-213ENST00000642137 USP44Q9H0E7 712 aa15.54■□□□□ 0.08
LINC00339-213ENST00000642137 DDX19BQ9UMR2 479 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms