RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 TICAM2Q86XR7 235 aa22.78■■□□□ 1.24
KCNMA1-293ENST00000640969 A0A087WZG4 1122 aa22.77■■□□□ 1.24
KCNMA1-293ENST00000640969 SNW1Q13573 536 aaKnown RBP22.77■■□□□ 1.24
KCNMA1-293ENST00000640969 SPECC1Q5M775 1068 aa22.77■■□□□ 1.24
KCNMA1-293ENST00000640969 CTR9Q6PD62 1173 aa22.77■■□□□ 1.24
KCNMA1-293ENST00000640969 TMCO5BA8MYB1 307 aa22.77■■□□□ 1.24
KCNMA1-293ENST00000640969 ZPR1O75312 459 aa22.77■■□□□ 1.24
KCNMA1-293ENST00000640969 GTF2F1P35269 517 aaKnown RBP eCLIP22.77■■□□□ 1.24
KCNMA1-293ENST00000640969 CHMP4BP1P59074 171 aa22.76■■□□□ 1.23
KCNMA1-293ENST00000640969 RBM27Q9P2N5 1060 aaKnown RBP22.76■■□□□ 1.23
KCNMA1-293ENST00000640969 NF2P35240 595 aa22.76■■□□□ 1.23
KCNMA1-293ENST00000640969 TRERF1Q96PN7 1200 aa22.76■■□□□ 1.23
KCNMA1-293ENST00000640969 TAOK3Q9H2K8 898 aa22.76■■□□□ 1.23
KCNMA1-293ENST00000640969 SUPT6HQ7KZ85 1726 aaKnown RBP22.76■■□□□ 1.23
KCNMA1-293ENST00000640969 LRPPRCP42704 1394 aaKnown RBP22.76■■□□□ 1.23
KCNMA1-293ENST00000640969 CCDC40Q4G0X9 1142 aa22.76■■□□□ 1.23
KCNMA1-293ENST00000640969 PPP4R3BQ5MIZ7 849 aa22.76■■□□□ 1.23
KCNMA1-293ENST00000640969 TBC1D9Q6ZT07 1266 aa22.76■■□□□ 1.23
KCNMA1-293ENST00000640969 CCDC144CPQ8IYA2 1237 aa22.76■■□□□ 1.23
KCNMA1-293ENST00000640969 TRMT112Q9UI30 125 aaKnown RBP22.75■■□□□ 1.23
KCNMA1-293ENST00000640969 ANKRD18BA2A2Z9 1011 aa22.75■■□□□ 1.23
KCNMA1-293ENST00000640969 CCDC175P0C221 793 aa22.75■■□□□ 1.23
KCNMA1-293ENST00000640969 CTNNA2P26232 953 aa22.75■■□□□ 1.23
KCNMA1-293ENST00000640969 CALML4Q96GE6 196 aa22.75■■□□□ 1.23
KCNMA1-293ENST00000640969 AMOTQ4VCS5 1084 aa22.75■■□□□ 1.23
KCNMA1-293ENST00000640969 TIAM1Q13009 1591 aa22.75■■□□□ 1.23
KCNMA1-293ENST00000640969 FAM107BQ9H098 131 aa22.74■■□□□ 1.23
KCNMA1-293ENST00000640969 BAG4O95429 457 aaKnown RBP22.74■■□□□ 1.23
KCNMA1-293ENST00000640969 USP16Q9Y5T5 823 aa22.74■■□□□ 1.23
KCNMA1-293ENST00000640969 GOLGA6L9A6NEM1 432 aa22.74■■□□□ 1.23
KCNMA1-293ENST00000640969 AMPD3Q01432 767 aa22.74■■□□□ 1.23
KCNMA1-293ENST00000640969 WAPLQ7Z5K2 1190 aa22.74■■□□□ 1.23
KCNMA1-293ENST00000640969 EHMT1Q9H9B1 1298 aa22.74■■□□□ 1.23
KCNMA1-293ENST00000640969 HYPKQ9NX55 129 aa22.74■■□□□ 1.23
KCNMA1-293ENST00000640969 PTPRCP08575 1304 aa22.74■■□□□ 1.23
KCNMA1-293ENST00000640969 TRIM27P14373 513 aa22.74■■□□□ 1.23
KCNMA1-293ENST00000640969 SPTY2D1Q68D10 685 aaPredicted RBP22.74■■□□□ 1.23
KCNMA1-293ENST00000640969 NME9Q86XW9 330 aa22.74■■□□□ 1.23
KCNMA1-293ENST00000640969 LIG1P18858 919 aa22.73■■□□□ 1.23
KCNMA1-293ENST00000640969 ISM2Q6H9L7 571 aa22.73■■□□□ 1.23
KCNMA1-293ENST00000640969 MAATS1Q7Z4T9 603 aa22.73■■□□□ 1.23
KCNMA1-293ENST00000640969 PANK2Q9BZ23 570 aa22.73■■□□□ 1.23
KCNMA1-293ENST00000640969 PRPF4BQ13523 1007 aaKnown RBP22.73■■□□□ 1.23
KCNMA1-293ENST00000640969 CEP135Q66GS9 1140 aa22.73■■□□□ 1.23
KCNMA1-293ENST00000640969 MPRIPQ6WCQ1 1025 aa22.73■■□□□ 1.23
KCNMA1-293ENST00000640969 FAM114A1Q8IWE2 563 aa22.73■■□□□ 1.23
KCNMA1-293ENST00000640969 IARSP41252 1262 aaKnown RBP22.73■■□□□ 1.23
KCNMA1-293ENST00000640969 TCERG1LQ5VWI1 586 aa22.73■■□□□ 1.23
KCNMA1-293ENST00000640969 GOLIM4O00461 696 aa22.72■■□□□ 1.23
KCNMA1-293ENST00000640969 MCM5P33992 734 aa22.72■■□□□ 1.23
KCNMA1-293ENST00000640969 TMEM67Q5HYA8 995 aa22.72■■□□□ 1.23
KCNMA1-293ENST00000640969 TCP11L1Q9NUJ3 509 aa22.72■■□□□ 1.23
KCNMA1-293ENST00000640969 ECHDC1Q9NTX5 307 aa22.72■■□□□ 1.23
KCNMA1-293ENST00000640969 ZNF165P49910 485 aa22.72■■□□□ 1.23
KCNMA1-293ENST00000640969 CETN1Q12798 172 aa22.72■■□□□ 1.23
KCNMA1-293ENST00000640969 RAPGEF3O95398 923 aa22.71■■□□□ 1.23
KCNMA1-293ENST00000640969 CEP63Q96MT8 703 aa22.71■■□□□ 1.23
KCNMA1-293ENST00000640969 EMILIN1Q9Y6C2 1016 aa22.71■■□□□ 1.23
KCNMA1-293ENST00000640969 IDEP14735 1019 aa22.71■■□□□ 1.23
KCNMA1-293ENST00000640969 UVSSAQ2YD98 709 aa22.71■■□□□ 1.23
KCNMA1-293ENST00000640969 UBE2HP62256 183 aa22.71■■□□□ 1.23
KCNMA1-293ENST00000640969 NOP2P46087 812 aaKnown RBP22.7■■□□□ 1.22
KCNMA1-293ENST00000640969 GIGYF2Q6Y7W6 1299 aaKnown RBP22.7■■□□□ 1.22
KCNMA1-293ENST00000640969 CCDC12Q8WUD4 166 aaPredicted RBP22.7■■□□□ 1.22
KCNMA1-293ENST00000640969 JADE2Q9NQC1 790 aa22.7■■□□□ 1.22
KCNMA1-293ENST00000640969 DBF4Q9UBU7 674 aaPredicted RBP22.7■■□□□ 1.22
KCNMA1-293ENST00000640969 FLIIQ13045 1269 aa22.7■■□□□ 1.22
KCNMA1-293ENST00000640969 FERMT2Q96AC1 680 aa22.7■■□□□ 1.22
KCNMA1-293ENST00000640969 PIP4K2BP78356 416 aa22.7■■□□□ 1.22
KCNMA1-293ENST00000640969 ORC3Q9UBD5 711 aaPredicted RBP22.7■■□□□ 1.22
KCNMA1-293ENST00000640969 SPDYE4A6NLX3 237 aa22.69■■□□□ 1.22
KCNMA1-293ENST00000640969 RAB11FIP4Q86YS3 637 aa22.69■■□□□ 1.22
KCNMA1-293ENST00000640969 LMAN1P49257 510 aa22.69■■□□□ 1.22
KCNMA1-293ENST00000640969 METAP2P50579 478 aaKnown RBP eCLIP22.69■■□□□ 1.22
KCNMA1-293ENST00000640969 ZSCAN23Q3MJ62 389 aa22.69■■□□□ 1.22
KCNMA1-293ENST00000640969 KANK3Q6NY19 840 aa22.69■■□□□ 1.22
KCNMA1-293ENST00000640969 NEK1Q96PY6 1258 aa22.69■■□□□ 1.22
KCNMA1-293ENST00000640969 MAP3K2Q9Y2U5 619 aa22.69■■□□□ 1.22
KCNMA1-293ENST00000640969 TTF1Q15361 905 aaPredicted RBP22.69■■□□□ 1.22
KCNMA1-293ENST00000640969 BMP2KLQ5H9B9 411 aa22.69■■□□□ 1.22
KCNMA1-293ENST00000640969 SLF2Q8IX21 1173 aa22.69■■□□□ 1.22
KCNMA1-293ENST00000640969 PYM1Q9BRP8 204 aaKnown RBP22.69■■□□□ 1.22
KCNMA1-293ENST00000640969 HAND2P61296 217 aa22.68■■□□□ 1.22
KCNMA1-293ENST00000640969 GNG11P61952 73 aa22.68■■□□□ 1.22
KCNMA1-293ENST00000640969 TTC22Q5TAA0 569 aa22.68■■□□□ 1.22
KCNMA1-293ENST00000640969 ZSWIM4Q9H7M6 989 aa22.68■■□□□ 1.22
KCNMA1-293ENST00000640969 CCDC141Q6ZP82 1450 aa22.68■■□□□ 1.22
KCNMA1-293ENST00000640969 PRC1O43663 620 aa22.68■■□□□ 1.22
KCNMA1-293ENST00000640969 KIF5BP33176 963 aa22.68■■□□□ 1.22
KCNMA1-293ENST00000640969 CCDC102BQ68D86 513 aa22.68■■□□□ 1.22
KCNMA1-293ENST00000640969 MICU3Q86XE3 530 aa22.68■■□□□ 1.22
KCNMA1-293ENST00000640969 PPFIA3O75145 1194 aa22.68■■□□□ 1.22
KCNMA1-293ENST00000640969 SLC26A6Q9BXS9 759 aa22.68■■□□□ 1.22
KCNMA1-293ENST00000640969 BMS1Q14692 1282 aaKnown RBP22.67■■□□□ 1.22
KCNMA1-293ENST00000640969 TSHZ3Q63HK5 1081 aa22.67■■□□□ 1.22
KCNMA1-293ENST00000640969 PODXL2Q9NZ53 605 aa22.67■■□□□ 1.22
KCNMA1-293ENST00000640969 PAXBP1Q9Y5B6 917 aa22.67■■□□□ 1.22
KCNMA1-293ENST00000640969 VAT1LQ9HCJ6 419 aa22.67■■□□□ 1.22
KCNMA1-293ENST00000640969 MYO1BO43795 1136 aa22.66■■□□□ 1.22
KCNMA1-293ENST00000640969 SPECC1LQ69YQ0 1117 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms