RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 ARID4AP29374 1257 aaPredicted RBP9.59□□□□□ -0.87
RTTN-223ENST00000640931 ATF7IPQ6VMQ6 1270 aa9.59□□□□□ -0.87
RTTN-223ENST00000640931 ITFG2Q969R8 447 aa9.59□□□□□ -0.87
RTTN-223ENST00000640931 IFT57Q9NWB7 429 aa9.59□□□□□ -0.87
RTTN-223ENST00000640931 KIF3CO14782 793 aa9.59□□□□□ -0.87
RTTN-223ENST00000640931 TWISTNBQ3B726 338 aaPredicted RBP9.59□□□□□ -0.87
RTTN-223ENST00000640931 GAS2L3Q86XJ1 694 aa9.59□□□□□ -0.87
RTTN-223ENST00000640931 ANKRD7Q92527 254 aa9.59□□□□□ -0.87
RTTN-223ENST00000640931 CHMP5Q9NZZ3 219 aa9.59□□□□□ -0.87
RTTN-223ENST00000640931 MRVI1Q9Y6F6 885 aa9.59□□□□□ -0.87
RTTN-223ENST00000640931 FLT4P35916 1363 aa9.58□□□□□ -0.88
RTTN-223ENST00000640931 RGPD1P0DJD0 1748 aa9.58□□□□□ -0.88
RTTN-223ENST00000640931 SETD1BQ9UPS6 1966 aaKnown RBP9.58□□□□□ -0.88
RTTN-223ENST00000640931 HSPA1LP34931 641 aa9.58□□□□□ -0.88
RTTN-223ENST00000640931 GNAI1P63096 354 aa9.58□□□□□ -0.88
RTTN-223ENST00000640931 NECTIN2Q92692 538 aa9.58□□□□□ -0.88
RTTN-223ENST00000640931 PDLIM2Q96JY6 352 aa9.58□□□□□ -0.88
RTTN-223ENST00000640931 CWC22Q9HCG8 908 aaKnown RBP9.58□□□□□ -0.88
RTTN-223ENST00000640931 PPP1R12AO14974 1030 aaPredicted RBP9.57□□□□□ -0.88
RTTN-223ENST00000640931 PLCB2Q00722 1185 aa9.57□□□□□ -0.88
RTTN-223ENST00000640931 PDZRN3Q9UPQ7 1066 aa9.57□□□□□ -0.88
RTTN-223ENST00000640931 IGSF1Q8N6C5 1336 aa9.57□□□□□ -0.88
RTTN-223ENST00000640931 CABLES1Q8TDN4 633 aa9.57□□□□□ -0.88
RTTN-223ENST00000640931 FAM210AQ96ND0 272 aa9.57□□□□□ -0.88
RTTN-223ENST00000640931 CCDC39Q9UFE4 941 aa9.57□□□□□ -0.88
RTTN-223ENST00000640931 NWD1Q149M9 1564 aa9.57□□□□□ -0.88
RTTN-223ENST00000640931 KRT28Q7Z3Y7 464 aa9.56□□□□□ -0.88
RTTN-223ENST00000640931 AXIN2Q9Y2T1 843 aa9.56□□□□□ -0.88
RTTN-223ENST00000640931 ARHGEF10O15013 1369 aa9.56□□□□□ -0.88
RTTN-223ENST00000640931 CRB1P82279 1406 aa9.56□□□□□ -0.88
RTTN-223ENST00000640931 STRCP1A6NGW2 1772 aa9.56□□□□□ -0.88
RTTN-223ENST00000640931 TMEM94Q12767 1356 aa9.56□□□□□ -0.88
RTTN-223ENST00000640931 CCDC189A1A4V9 331 aa9.55□□□□□ -0.88
RTTN-223ENST00000640931 SEC24BO95487 1268 aa9.55□□□□□ -0.88
RTTN-223ENST00000640931 U2AF2P26368 475 aaKnown RBP eCLIP9.55□□□□□ -0.881e-5■□□□□ 9.3
RTTN-223ENST00000640931 SWT1Q5T5J6 900 aaKnown RBP9.55□□□□□ -0.88
RTTN-223ENST00000640931 BCL2L12Q9HB09 334 aa9.55□□□□□ -0.88
RTTN-223ENST00000640931 GOLGA6L6A8MZA4 724 aa9.55□□□□□ -0.88
RTTN-223ENST00000640931 CHL1O00533 1208 aa9.55□□□□□ -0.88
RTTN-223ENST00000640931 ZC3H6P61129 1189 aaKnown RBP9.55□□□□□ -0.88
RTTN-223ENST00000640931 TRDNQ13061 729 aa9.55□□□□□ -0.88
RTTN-223ENST00000640931 LRCH2Q5VUJ6 765 aa9.55□□□□□ -0.88
RTTN-223ENST00000640931 G2E3Q7L622 706 aa9.55□□□□□ -0.88
RTTN-223ENST00000640931 CCDC91Q7Z6B0 441 aa9.55□□□□□ -0.88
RTTN-223ENST00000640931 NBPF3Q9H094 633 aa9.55□□□□□ -0.88
RTTN-223ENST00000640931 SUFUQ9UMX1 484 aa9.55□□□□□ -0.88
RTTN-223ENST00000640931 KLHL33A6NCF5 533 aa9.54□□□□□ -0.88
RTTN-223ENST00000640931 GCP02774 474 aa9.54□□□□□ -0.88
RTTN-223ENST00000640931 CT47B1P0C2W7 299 aaPredicted RBP9.54□□□□□ -0.88
RTTN-223ENST00000640931 RAD51AP2Q09MP3 1159 aa9.54□□□□□ -0.88
RTTN-223ENST00000640931 MTA1Q13330 715 aa9.54□□□□□ -0.88
RTTN-223ENST00000640931 CCDC96Q2M329 555 aa9.54□□□□□ -0.88
RTTN-223ENST00000640931 IL17REQ8NFR9 667 aa9.54□□□□□ -0.88
RTTN-223ENST00000640931 SPDYE1Q8NFV5 336 aaPredicted RBP9.54□□□□□ -0.88
RTTN-223ENST00000640931 BORCS6Q96GS4 357 aa9.54□□□□□ -0.88
RTTN-223ENST00000640931 CXorf56Q9H5V9 222 aa9.54□□□□□ -0.88
RTTN-223ENST00000640931 LGR6Q9HBX8 967 aa9.54□□□□□ -0.88
RTTN-223ENST00000640931 MORC2Q9Y6X9 1032 aaPredicted RBP9.54□□□□□ -0.88
RTTN-223ENST00000640931 USP19O94966 1318 aa9.54□□□□□ -0.88
RTTN-223ENST00000640931 KIAA2012Q0VF49 1180 aa9.54□□□□□ -0.88
RTTN-223ENST00000640931 SYCP1Q15431 976 aa9.54□□□□□ -0.88
RTTN-223ENST00000640931 ALDH1L2Q3SY69 923 aa9.54□□□□□ -0.88
RTTN-223ENST00000640931 ZNF513Q8N8E2 541 aaPredicted RBP9.54□□□□□ -0.88
RTTN-223ENST00000640931 CALR3Q96L12 384 aaKnown RBP9.54□□□□□ -0.88
RTTN-223ENST00000640931 C1orf167Q5SNV9 1468 aa9.53□□□□□ -0.88
RTTN-223ENST00000640931 RGPD2P0DJD1 1756 aa9.53□□□□□ -0.88
RTTN-223ENST00000640931 MSH6P52701 1360 aa9.53□□□□□ -0.88
RTTN-223ENST00000640931 KCNQ3O43525 872 aa9.53□□□□□ -0.88
RTTN-223ENST00000640931 LIG1P18858 919 aa9.53□□□□□ -0.88
RTTN-223ENST00000640931 CASQ1P31415 396 aa9.53□□□□□ -0.88
RTTN-223ENST00000640931 C11orf91Q3C1V1 193 aa9.53□□□□□ -0.88
RTTN-223ENST00000640931 ANKRD23Q86SG2 305 aa9.53□□□□□ -0.88
RTTN-223ENST00000640931 JMYQ8N9B5 988 aa9.53□□□□□ -0.88
RTTN-223ENST00000640931 IP6K1Q92551 441 aa9.53□□□□□ -0.88
RTTN-223ENST00000640931 ZBTB40Q9NUA8 1239 aa9.53□□□□□ -0.88
RTTN-223ENST00000640931 TSPYL4Q9UJ04 414 aa9.53□□□□□ -0.88
RTTN-223ENST00000640931 NFAT5O94916 1531 aa9.53□□□□□ -0.88
RTTN-223ENST00000640931 KDRP35968 1356 aa9.53□□□□□ -0.88
RTTN-223ENST00000640931 F6X3S4 739 aa9.52□□□□□ -0.88
RTTN-223ENST00000640931 MPHOSPH10O00566 681 aaKnown RBP9.52□□□□□ -0.88
RTTN-223ENST00000640931 DDX41Q9UJV9 622 aaKnown RBP9.52□□□□□ -0.88
RTTN-223ENST00000640931 LTN1O94822 1766 aa9.52□□□□□ -0.89
RTTN-223ENST00000640931 ZBTB7BO15156 539 aaPredicted RBP9.52□□□□□ -0.89
RTTN-223ENST00000640931 GSCP56915 257 aaPredicted RBP9.52□□□□□ -0.89
RTTN-223ENST00000640931 TSHZ1Q6ZSZ6 1077 aa9.52□□□□□ -0.89
RTTN-223ENST00000640931 GOLGA6L1Q8N7Z2 621 aa9.52□□□□□ -0.89
RTTN-223ENST00000640931 RTF1Q92541 710 aaKnown RBP9.52□□□□□ -0.89
RTTN-223ENST00000640931 PAIP2Q9BPZ3 127 aaKnown RBP9.52□□□□□ -0.89
RTTN-223ENST00000640931 C19orf44Q9H6X5 657 aa9.52□□□□□ -0.89
RTTN-223ENST00000640931 NRDCO43847 1150 aa9.51□□□□□ -0.89
RTTN-223ENST00000640931 TOM1O60784 492 aa9.51□□□□□ -0.89
RTTN-223ENST00000640931 REC8O95072 547 aa9.51□□□□□ -0.89
RTTN-223ENST00000640931 SETDB1Q15047 1291 aa9.51□□□□□ -0.89
RTTN-223ENST00000640931 CHRNA2Q15822 529 aa9.51□□□□□ -0.89
RTTN-223ENST00000640931 RPAINQ86UA6 219 aa9.51□□□□□ -0.89
RTTN-223ENST00000640931 SIRT2Q8IXJ6 389 aa9.51□□□□□ -0.89
RTTN-223ENST00000640931 DDX19BQ9UMR2 479 aa9.51□□□□□ -0.89
RTTN-223ENST00000640931 GOLGA6L22H0YM25 854 aa9.51□□□□□ -0.89
RTTN-223ENST00000640931 MUM1L1Q5H9M0 696 aa9.51□□□□□ -0.89
RTTN-223ENST00000640931 ARHGEF25Q86VW2 580 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms