RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 GIMAP7Q8NHV1 300 aa5.84□□□□□ -1.47
HNRNPU-230ENST00000640657 CCDC102AQ96A19 550 aa5.84□□□□□ -1.47
HNRNPU-230ENST00000640657 LRRFIP2Q9Y608 721 aaKnown RBP5.84□□□□□ -1.47
HNRNPU-230ENST00000640657 TEFQ10587 303 aa5.84□□□□□ -1.48
HNRNPU-230ENST00000640657 ZSCAN25Q6NSZ9 544 aa5.84□□□□□ -1.48
HNRNPU-230ENST00000640657 TMC6Q7Z403 805 aa5.84□□□□□ -1.48
HNRNPU-230ENST00000640657 CCAR1Q8IX12 1150 aaKnown RBP5.84□□□□□ -1.48
HNRNPU-230ENST00000640657 TRIM34Q9BYJ4 488 aa5.84□□□□□ -1.48
HNRNPU-230ENST00000640657 CTNNA3Q9UI47 895 aa5.84□□□□□ -1.48
HNRNPU-230ENST00000640657 PLCH2O75038 1416 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 NOS1P29475 1434 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 SRGAP3O43295 1099 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 ZSCAN20P17040 1043 aaPredicted RBP5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 CFAP100Q494V2 611 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 SULT6B1Q6IMI4 303 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 CRACR2AQ9BSW2 395 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 ECHDC1Q9NTX5 307 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 SLC3A2P08195 630 aaKnown RBP5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 GSPT1P15170 499 aaKnown RBP5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 HSPA4P34932 840 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 TERF2Q15554 542 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 RALYLQ86SE5 291 aaKnown RBP5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 TDRD7Q8NHU6 1098 aaKnown RBP5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 CTCFLQ8NI51 663 aaPredicted RBP5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 PPM1EQ8WY54 764 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 ANKRD7Q92527 254 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 FMNL2Q96PY5 1086 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 MPHOSPH8Q99549 860 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 CBX8Q9HC52 389 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 NEURL4Q96JN8 1562 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 PPIP5K1Q6PFW1 1433 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 PSDA5PKW4 1024 aaPredicted RBP5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 AK2P54819 239 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 AKAP17AQ02040 695 aaKnown RBP5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 HDXQ7Z353 690 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 NBPF11Q86T75 865 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 C16orf71Q8IYS4 520 aaPredicted RBP5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 FSIP1Q8NA03 581 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 CAGE1Q8TC20 777 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 FYB1O15117 783 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 FERMT3Q86UX7 667 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 KCNG4Q8TDN1 519 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 DNAJC25Q9H1X3 360 aa5.83□□□□□ -1.48
HNRNPU-230ENST00000640657 ABCC10Q5T3U5 1492 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 GADD45BO75293 160 aaPredicted RBP5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 PLEKHG5O94827 1062 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 PIP4K2BP78356 416 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 HDGFL1Q5TGJ6 251 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 NUTM2DQ5VT03 806 aaPredicted RBP5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 GOLGA5Q8TBA6 731 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 BRMS1Q9HCU9 246 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 ZNHIT6Q9NWK9 470 aaKnown RBP5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 DNAI1Q9UI46 699 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 SYCP2Q9BX26 1530 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 TTC21BQ7Z4L5 1316 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 MYOM2P54296 1465 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 KIAA0232Q92628 1395 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 BRD3Q15059 726 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 KRBA2Q6ZNG9 492 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 LUZP1Q86V48 1076 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 NUTM1Q86Y26 1132 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 GPR161Q8N6U8 529 aaKnown RBP5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 BCL11BQ9C0K0 894 aaPredicted RBP5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 RIMBP3CA6NJZ7 1639 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 RIMBP3BA6NNM3 1639 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 RIMBP3Q9UFD9 1639 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 CTIFO43310 598 aaKnown RBP5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 CD2BP2O95400 341 aaKnown RBP5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 XBP1P17861 261 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 KIF4BQ2VIQ3 1234 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 RUFY3Q7L099 469 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 FCHSD1Q86WN1 690 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 MRPS27Q92552 414 aaKnown RBP5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 WASF1Q92558 559 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 SMARCC1Q92922 1105 aaPredicted RBP5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 FBXW7Q969H0 707 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 MEIS3Q99687 375 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 LLPHQ9BRT6 129 aaKnown RBP5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 IL1RAPL2Q9NP60 686 aa5.82□□□□□ -1.48
HNRNPU-230ENST00000640657 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.82□□□□□ -1.482e-10■■□□□ 11.8
HNRNPU-230ENST00000640657 GOLGA6L7A0A1B0GV03 622 aa5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 GNG11P61952 73 aa5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 PTCH1Q13635 1447 aa5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 C1orf141Q5JVX7 400 aa5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 KANK3Q6NY19 840 aa5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 OSCARQ8IYS5 282 aa5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 NGDNQ8NEJ9 315 aaKnown RBP5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 RHPN1Q8TCX5 695 aa5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 BABAM1Q9NWV8 329 aa5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 MYO6Q9UM54 1294 aa5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 NLRP1Q9C000 1473 aa5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 E9PCH4 1651 aa5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 PIK3R4Q99570 1358 aa5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 YEATS2Q9ULM3 1422 aa5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 EFCAB8A8MWE9 144 aa5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 IGSF3O75054 1194 aa5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 EIF2S2P20042 333 aaKnown RBP5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 CEBPZQ03701 1054 aaKnown RBP5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 ELF2Q15723 593 aa5.81□□□□□ -1.48
HNRNPU-230ENST00000640657 CCDC158Q5M9N0 1113 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms