RNA–Protein interactions for RNA: ENST00000640525.1

RTTN-219, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-219ENST00000640525 BARGINQ6ZT62 677 aa6.73□□□□□ -1.33
RTTN-219ENST00000640525 PKD1L3Q7Z443 1732 aa6.73□□□□□ -1.33
RTTN-219ENST00000640525 MBIPQ9NS73 344 aa6.73□□□□□ -1.33
RTTN-219ENST00000640525 WNK3Q9BYP7 1800 aa6.73□□□□□ -1.33
RTTN-219ENST00000640525 SHANK3Q9BYB0 1731 aa6.73□□□□□ -1.33
RTTN-219ENST00000640525 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.73□□□□□ -1.33
RTTN-219ENST00000640525 FANCIQ9NVI1 1328 aa6.73□□□□□ -1.33
RTTN-219ENST00000640525 ELL2O00472 640 aaPredicted RBP6.73□□□□□ -1.33
RTTN-219ENST00000640525 KCNQ3O43525 872 aa6.73□□□□□ -1.33
RTTN-219ENST00000640525 PHF14O94880 888 aa6.73□□□□□ -1.33
RTTN-219ENST00000640525 EXOSC9Q06265 439 aaKnown RBP6.73□□□□□ -1.33
RTTN-219ENST00000640525 TEFQ10587 303 aa6.73□□□□□ -1.33
RTTN-219ENST00000640525 KRT24Q2M2I5 525 aa6.73□□□□□ -1.33
RTTN-219ENST00000640525 MARCH10Q8NA82 808 aaPredicted RBP6.73□□□□□ -1.33
RTTN-219ENST00000640525 RGS17Q9UGC6 210 aaPredicted RBP6.73□□□□□ -1.33
RTTN-219ENST00000640525 MAP3K7O43318 606 aa6.72□□□□□ -1.33
RTTN-219ENST00000640525 HTATSF1O43719 755 aaKnown RBP6.72□□□□□ -1.33
RTTN-219ENST00000640525 GNAI1P63096 354 aa6.72□□□□□ -1.33
RTTN-219ENST00000640525 EN1Q05925 392 aaPredicted RBP6.72□□□□□ -1.33
RTTN-219ENST00000640525 FAM161AQ3B820 660 aa6.72□□□□□ -1.33
RTTN-219ENST00000640525 VARS2Q5ST30 1063 aaKnown RBP6.72□□□□□ -1.33
RTTN-219ENST00000640525 SEPT12Q8IYM1 358 aa6.72□□□□□ -1.33
RTTN-219ENST00000640525 TRMT2AQ8IZ69 625 aaKnown RBP6.72□□□□□ -1.33
RTTN-219ENST00000640525 NFATC2IPQ8NCF5 419 aa6.72□□□□□ -1.33
RTTN-219ENST00000640525 ACSBG1Q96GR2 724 aa6.72□□□□□ -1.33
RTTN-219ENST00000640525 MYH16Q9H6N6 1097 aa6.72□□□□□ -1.33
RTTN-219ENST00000640525 LRRC37A3O60309 1634 aa6.72□□□□□ -1.33
RTTN-219ENST00000640525 FAM205CA6NFA0 338 aa6.71□□□□□ -1.33
RTTN-219ENST00000640525 ZNF853P0CG23 659 aa6.71□□□□□ -1.33
RTTN-219ENST00000640525 CABP4P57796 275 aa6.71□□□□□ -1.33
RTTN-219ENST00000640525 CALD1Q05682 793 aaKnown RBP6.71□□□□□ -1.33
RTTN-219ENST00000640525 SLC39A6Q13433 755 aa6.71□□□□□ -1.33
RTTN-219ENST00000640525 TAF7Q15545 349 aaPredicted RBP6.71□□□□□ -1.33
RTTN-219ENST00000640525 ZNF772Q68DY9 489 aaPredicted RBP6.71□□□□□ -1.33
RTTN-219ENST00000640525 POTEAQ6S8J7 498 aa6.71□□□□□ -1.33
RTTN-219ENST00000640525 GPIHBP1Q8IV16 184 aa6.71□□□□□ -1.33
RTTN-219ENST00000640525 SYTL4Q96C24 671 aaPredicted RBP6.71□□□□□ -1.33
RTTN-219ENST00000640525 DCAF5Q96JK2 942 aa6.71□□□□□ -1.33
RTTN-219ENST00000640525 CDCA7Q9BWT1 371 aaPredicted RBP6.71□□□□□ -1.33
RTTN-219ENST00000640525 SLC24A3Q9HC58 644 aa6.71□□□□□ -1.33
RTTN-219ENST00000640525 IFT57Q9NWB7 429 aa6.71□□□□□ -1.33
RTTN-219ENST00000640525 TSPYL4Q9UJ04 414 aa6.71□□□□□ -1.33
RTTN-219ENST00000640525 TNS2Q63HR2 1409 aa6.71□□□□□ -1.34
RTTN-219ENST00000640525 CEMIPQ8WUJ3 1361 aa6.71□□□□□ -1.34
RTTN-219ENST00000640525 IL16Q14005 1332 aa6.71□□□□□ -1.34
RTTN-219ENST00000640525 BTBD11A6QL63 1104 aa6.71□□□□□ -1.34
RTTN-219ENST00000640525 CHL1O00533 1208 aa6.71□□□□□ -1.34
RTTN-219ENST00000640525 TCERG1O14776 1098 aaKnown RBP6.71□□□□□ -1.34
RTTN-219ENST00000640525 ZMYND10O75800 440 aa6.71□□□□□ -1.34
RTTN-219ENST00000640525 COL9A1P20849 921 aa6.71□□□□□ -1.34
RTTN-219ENST00000640525 SMYD5Q6GMV2 418 aa6.71□□□□□ -1.34
RTTN-219ENST00000640525 TSPYL6Q8N831 410 aa6.71□□□□□ -1.34
RTTN-219ENST00000640525 C8orf58Q8NAV2 365 aa6.71□□□□□ -1.34
RTTN-219ENST00000640525 HSP90AB1P08238 724 aaKnown RBP6.7□□□□□ -1.34
RTTN-219ENST00000640525 C6orf132Q5T0Z8 1188 aa6.7□□□□□ -1.34
RTTN-219ENST00000640525 SLC52A2Q9HAB3 445 aa6.7□□□□□ -1.34
RTTN-219ENST00000640525 SUPT16HQ9Y5B9 1047 aaKnown RBP6.7□□□□□ -1.34
RTTN-219ENST00000640525 VIRMAQ69YN4 1812 aaKnown RBP6.7□□□□□ -1.34
RTTN-219ENST00000640525 TOGARAM1Q9Y4F4 1720 aa6.7□□□□□ -1.34
RTTN-219ENST00000640525 C3orf80F5H4A9 247 aa6.7□□□□□ -1.34
RTTN-219ENST00000640525 PSEN2P49810 448 aa6.7□□□□□ -1.34
RTTN-219ENST00000640525 RBM6P78332 1123 aaKnown RBP6.7□□□□□ -1.34
RTTN-219ENST00000640525 PTGDRQ13258 359 aa6.7□□□□□ -1.34
RTTN-219ENST00000640525 PTF1AQ7RTS3 328 aa6.7□□□□□ -1.34
RTTN-219ENST00000640525 NECTIN2Q92692 538 aa6.7□□□□□ -1.34
RTTN-219ENST00000640525 ZDHHC16Q969W1 377 aa6.7□□□□□ -1.34
RTTN-219ENST00000640525 BCL2L13Q9BXK5 485 aa6.7□□□□□ -1.34
RTTN-219ENST00000640525 SCN11AQ9UI33 1791 aa6.69□□□□□ -1.34
RTTN-219ENST00000640525 THSD7AQ9UPZ6 1657 aa6.69□□□□□ -1.34
RTTN-219ENST00000640525 KCNQ2O43526 872 aa6.69□□□□□ -1.34
RTTN-219ENST00000640525 RXRBP28702 533 aa6.69□□□□□ -1.34
RTTN-219ENST00000640525 EMP3P54852 163 aa6.69□□□□□ -1.34
RTTN-219ENST00000640525 TMOD3Q9NYL9 352 aa6.69□□□□□ -1.34
RTTN-219ENST00000640525 RCAN3Q9UKA8 241 aa6.69□□□□□ -1.34
RTTN-219ENST00000640525 PRAMEF22A3QJZ6 481 aa6.68□□□□□ -1.34
RTTN-219ENST00000640525 ERVV-2B6SEH9 535 aa6.68□□□□□ -1.34
RTTN-219ENST00000640525 ONECUT3O60422 494 aaPredicted RBP6.68□□□□□ -1.34
RTTN-219ENST00000640525 BCAR3O75815 825 aa6.68□□□□□ -1.34
RTTN-219ENST00000640525 IRX6P78412 446 aaPredicted RBP6.68□□□□□ -1.34
RTTN-219ENST00000640525 PIGBQ92521 554 aa6.68□□□□□ -1.34
RTTN-219ENST00000640525 PLEKHG2Q9H7P9 1386 aa6.68□□□□□ -1.34
RTTN-219ENST00000640525 ADAMTS7Q9UKP4 1686 aa6.68□□□□□ -1.34
RTTN-219ENST00000640525 PLIN1O60240 522 aa6.68□□□□□ -1.34
RTTN-219ENST00000640525 PTCD1O75127 700 aaKnown RBP6.68□□□□□ -1.34
RTTN-219ENST00000640525 EIF4A1P60842 406 aaKnown RBP6.68□□□□□ -1.34
RTTN-219ENST00000640525 TWISTNBQ3B726 338 aaPredicted RBP6.68□□□□□ -1.34
RTTN-219ENST00000640525 TYW1BQ6NUM6 668 aa6.68□□□□□ -1.34
RTTN-219ENST00000640525 ASAP1Q9ULH1 1129 aa6.68□□□□□ -1.34
RTTN-219ENST00000640525 DOT1LQ8TEK3 1739 aa6.67□□□□□ -1.34
RTTN-219ENST00000640525 TULP1O00294 542 aaPredicted RBP6.67□□□□□ -1.34
RTTN-219ENST00000640525 VAMP4O75379 141 aa6.67□□□□□ -1.34
RTTN-219ENST00000640525 ZNF790Q6PG37 636 aa6.67□□□□□ -1.34
RTTN-219ENST00000640525 FAM198AQ9UFP1 575 aa6.67□□□□□ -1.34
RTTN-219ENST00000640525 SIPA1L3O60292 1781 aaPredicted RBP6.67□□□□□ -1.34
RTTN-219ENST00000640525 KAT6BQ8WYB5 2073 aa6.67□□□□□ -1.34
RTTN-219ENST00000640525 BRWD3Q6RI45 1802 aa6.67□□□□□ -1.34
RTTN-219ENST00000640525 EIF2S2P20042 333 aaKnown RBP6.67□□□□□ -1.34
RTTN-219ENST00000640525 KRT27Q7Z3Y8 459 aa6.67□□□□□ -1.34
RTTN-219ENST00000640525 TTC5Q8N0Z6 440 aa6.67□□□□□ -1.34
RTTN-219ENST00000640525 ZNF496Q96IT1 587 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms