RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 NLRP3Q96P20 1036 aa6.88□□□□□ -1.31
RTTN-218ENST00000640408 ASAP1Q9ULH1 1129 aa6.88□□□□□ -1.31
RTTN-218ENST00000640408 TRIM35Q9UPQ4 493 aa6.88□□□□□ -1.31
RTTN-218ENST00000640408 SHPRHQ149N8 1683 aa6.88□□□□□ -1.31
RTTN-218ENST00000640408 LRRFIP1Q32MZ4 808 aaKnown RBP6.88□□□□□ -1.31
RTTN-218ENST00000640408 ATF7IPQ6VMQ6 1270 aa6.88□□□□□ -1.31
RTTN-218ENST00000640408 NECTIN2Q92692 538 aa6.88□□□□□ -1.31
RTTN-218ENST00000640408 SLKQ9H2G2 1235 aaPredicted RBP6.88□□□□□ -1.31
RTTN-218ENST00000640408 KIF20BQ96Q89 1820 aa6.88□□□□□ -1.31
RTTN-218ENST00000640408 CNTNAP4Q9C0A0 1308 aa6.87□□□□□ -1.31
RTTN-218ENST00000640408 NFKBIBQ15653 356 aa6.87□□□□□ -1.31
RTTN-218ENST00000640408 PLBD2Q8NHP8 589 aa6.87□□□□□ -1.31
RTTN-218ENST00000640408 ATG3Q9NT62 314 aa6.87□□□□□ -1.31
RTTN-218ENST00000640408 CWC25Q9NXE8 425 aaPredicted RBP6.87□□□□□ -1.31
RTTN-218ENST00000640408 CHMP3Q9Y3E7 222 aa6.87□□□□□ -1.31
RTTN-218ENST00000640408 PDE4AP27815 886 aa6.87□□□□□ -1.31
RTTN-218ENST00000640408 CDC5LQ99459 802 aaKnown RBP6.87□□□□□ -1.31
RTTN-218ENST00000640408 COPS6Q7L5N1 327 aa6.87□□□□□ -1.31
RTTN-218ENST00000640408 HOMEZQ8IX15 550 aa6.87□□□□□ -1.31
RTTN-218ENST00000640408 GPATCH3Q96I76 525 aa6.87□□□□□ -1.31
RTTN-218ENST00000640408 SPON1Q9HCB6 807 aa6.87□□□□□ -1.31
RTTN-218ENST00000640408 BCL9O00512 1426 aa6.87□□□□□ -1.31
RTTN-218ENST00000640408 MIS18AQ9NYP9 233 aa6.87□□□□□ -1.31
RTTN-218ENST00000640408 TRMT112Q9UI30 125 aaKnown RBP6.87□□□□□ -1.31
RTTN-218ENST00000640408 CEMIPQ8WUJ3 1361 aa6.87□□□□□ -1.31
RTTN-218ENST00000640408 PHF14O94880 888 aa6.87□□□□□ -1.31
RTTN-218ENST00000640408 ZNF853P0CG23 659 aa6.87□□□□□ -1.31
RTTN-218ENST00000640408 XAGE3Q8WTP9 111 aa6.87□□□□□ -1.31
RTTN-218ENST00000640408 PIK3C2AO00443 1686 aa6.86□□□□□ -1.31
RTTN-218ENST00000640408 IRX3P78415 501 aaPredicted RBP6.86□□□□□ -1.31
RTTN-218ENST00000640408 GORABQ5T7V8 394 aa6.86□□□□□ -1.31
RTTN-218ENST00000640408 TMC4Q7Z404 712 aa6.86□□□□□ -1.31
RTTN-218ENST00000640408 KLHL34Q8N239 644 aa6.86□□□□□ -1.31
RTTN-218ENST00000640408 CCDC191Q8NCU4 936 aa6.86□□□□□ -1.31
RTTN-218ENST00000640408 COL22A1Q8NFW1 1626 aaPredicted RBP6.86□□□□□ -1.31
RTTN-218ENST00000640408 SH3TC1Q8TE82 1336 aa6.86□□□□□ -1.31
RTTN-218ENST00000640408 VAMP4O75379 141 aa6.86□□□□□ -1.31
RTTN-218ENST00000640408 CC2D2BQ6DHV5 1058 aa6.86□□□□□ -1.31
RTTN-218ENST00000640408 CRKLP46109 303 aaKnown RBP6.86□□□□□ -1.31
RTTN-218ENST00000640408 SOGA3Q5TF21 947 aa6.86□□□□□ -1.31
RTTN-218ENST00000640408 ERC1Q8IUD2 1116 aa6.86□□□□□ -1.31
RTTN-218ENST00000640408 RPGRQ92834 1020 aaKnown RBP6.86□□□□□ -1.31
RTTN-218ENST00000640408 UTP14AQ9BVJ6 771 aaKnown RBP6.86□□□□□ -1.31
RTTN-218ENST00000640408 R3HCC1Q9Y3T6 440 aaKnown RBP6.86□□□□□ -1.31
RTTN-218ENST00000640408 NRKQ7Z2Y5 1582 aa6.86□□□□□ -1.31
RTTN-218ENST00000640408 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.86□□□□□ -1.31
RTTN-218ENST00000640408 G3BP1Q13283 466 aaKnown RBP eCLIP6.86□□□□□ -1.31
RTTN-218ENST00000640408 NARFQ9UHQ1 456 aa6.86□□□□□ -1.31
RTTN-218ENST00000640408 NIP7Q9Y221 180 aaKnown RBP eCLIP6.86□□□□□ -1.31
RTTN-218ENST00000640408 IGHMBP2P38935 993 aaKnown RBP6.85□□□□□ -1.31
RTTN-218ENST00000640408 CCDC57Q2TAC2 916 aa6.85□□□□□ -1.31
RTTN-218ENST00000640408 GRIPAP1Q4V328 841 aa6.85□□□□□ -1.31
RTTN-218ENST00000640408 DDX46Q7L014 1031 aaKnown RBP6.85□□□□□ -1.31
RTTN-218ENST00000640408 ALS2Q96Q42 1657 aa6.85□□□□□ -1.31
RTTN-218ENST00000640408 MEGF6O75095 1541 aa6.85□□□□□ -1.31
RTTN-218ENST00000640408 GNAI2P04899 355 aa6.85□□□□□ -1.31
RTTN-218ENST00000640408 KCNJ4P48050 445 aa6.85□□□□□ -1.31
RTTN-218ENST00000640408 CNBD1Q8NA66 436 aa6.85□□□□□ -1.31
RTTN-218ENST00000640408 MPHOSPH8Q99549 860 aa6.85□□□□□ -1.31
RTTN-218ENST00000640408 PDE6BP35913 854 aa6.85□□□□□ -1.31
RTTN-218ENST00000640408 SLC15A2Q16348 729 aa6.85□□□□□ -1.31
RTTN-218ENST00000640408 GIGYF2Q6Y7W6 1299 aaKnown RBP6.85□□□□□ -1.31
RTTN-218ENST00000640408 SENP3-EIF4A1A0A087X0R7 540 aa6.85□□□□□ -1.31
RTTN-218ENST00000640408 RARSP54136 660 aaKnown RBP6.85□□□□□ -1.31
RTTN-218ENST00000640408 EN1Q05925 392 aaPredicted RBP6.85□□□□□ -1.31
RTTN-218ENST00000640408 RPAP2Q8IXW5 612 aaPredicted RBP6.85□□□□□ -1.31
RTTN-218ENST00000640408 SPRYD3Q8NCJ5 442 aa6.85□□□□□ -1.31
RTTN-218ENST00000640408 SSH1Q8WYL5 1049 aa6.85□□□□□ -1.31
RTTN-218ENST00000640408 ZBTB3Q9H5J0 574 aa6.85□□□□□ -1.31
RTTN-218ENST00000640408 FAM208AQ9UK61 1670 aaKnown RBP6.85□□□□□ -1.31
RTTN-218ENST00000640408 CCDC152Q4G0S7 254 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 CNKSR1Q969H4 720 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 DISP2A7MBM2 1401 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 TCIRG1Q13488 830 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 FAM182BQ5T319 152 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 CHPF2Q9P2E5 772 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 ISY1Q9ULR0 285 aaKnown RBP6.84□□□□□ -1.31
RTTN-218ENST00000640408 LRP6O75581 1613 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 PI4KAP2A4QPH2 592 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 PI4KAP1Q8N8J0 262 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 MAP3K15Q6ZN16 1313 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 NWD2Q9ULI1 1742 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 KCNQ2O43526 872 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 HMGN5P82970 282 aaKnown RBP6.84□□□□□ -1.31
RTTN-218ENST00000640408 TRIM28Q13263 835 aaKnown RBP6.84□□□□□ -1.31
RTTN-218ENST00000640408 CLUAP1Q96AJ1 413 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 CDCA7LQ96GN5 454 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 BCL2L13Q9BXK5 485 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 DIAPH3Q9NSV4 1193 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 GNL3LQ9NVN8 582 aaKnown RBP6.84□□□□□ -1.31
RTTN-218ENST00000640408 CCDC39Q9UFE4 941 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 TBC1D2BQ9UPU7 963 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 USP16Q9Y5T5 823 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 MYOM1P52179 1685 aa6.84□□□□□ -1.31
RTTN-218ENST00000640408 TRPM3Q9HCF6 1732 aaPredicted RBP6.84□□□□□ -1.31
RTTN-218ENST00000640408 RGPD8O14715 1765 aaPredicted RBP6.84□□□□□ -1.31
RTTN-218ENST00000640408 A1BGP04217 495 aa6.84□□□□□ -1.32
RTTN-218ENST00000640408 C8orf58Q8NAV2 365 aa6.84□□□□□ -1.32
RTTN-218ENST00000640408 ALDH1B1P30837 517 aa6.83□□□□□ -1.32
RTTN-218ENST00000640408 BICDL1Q6ZP65 573 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms