RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 CALD1Q05682 793 aaKnown RBP10.3□□□□□ -0.76
SCARB2-220ENST00000640076 C1orf141Q5JVX7 400 aa10.3□□□□□ -0.76
SCARB2-220ENST00000640076 DUSP27Q5VZP5 1158 aa10.3□□□□□ -0.76
SCARB2-220ENST00000640076 LRRC37A3O60309 1634 aa10.29□□□□□ -0.76
SCARB2-220ENST00000640076 SHANK3Q9BYB0 1731 aa10.29□□□□□ -0.76
SCARB2-220ENST00000640076 CYP27B1O15528 508 aa10.29□□□□□ -0.76
SCARB2-220ENST00000640076 IL17REQ8NFR9 667 aa10.29□□□□□ -0.76
SCARB2-220ENST00000640076 ZCRB1Q8TBF4 217 aaKnown RBP10.29□□□□□ -0.76
SCARB2-220ENST00000640076 VIRMAQ69YN4 1812 aaKnown RBP10.29□□□□□ -0.76
SCARB2-220ENST00000640076 ADAMTS7Q9UKP4 1686 aa10.29□□□□□ -0.76
SCARB2-220ENST00000640076 CEMIPQ8WUJ3 1361 aa10.28□□□□□ -0.76
SCARB2-220ENST00000640076 SOCS7O14512 581 aa10.28□□□□□ -0.76
SCARB2-220ENST00000640076 PHKG2P15735 406 aa10.28□□□□□ -0.76
SCARB2-220ENST00000640076 CDCA7Q9BWT1 371 aaPredicted RBP10.28□□□□□ -0.76
SCARB2-220ENST00000640076 PCDH11XQ9BZA7 1347 aa10.28□□□□□ -0.76
SCARB2-220ENST00000640076 PCDH11YQ9BZA8 1340 aa10.28□□□□□ -0.76
SCARB2-220ENST00000640076 PPP2R2DQ66LE6 453 aa10.28□□□□□ -0.76
SCARB2-220ENST00000640076 IFNL2Q8IZJ0 200 aa10.28□□□□□ -0.76
SCARB2-220ENST00000640076 MYH16Q9H6N6 1097 aa10.28□□□□□ -0.76
SCARB2-220ENST00000640076 PRM3Q9NNZ6 103 aa10.28□□□□□ -0.76
SCARB2-220ENST00000640076 IFT57Q9NWB7 429 aa10.28□□□□□ -0.76
SCARB2-220ENST00000640076 TMEM88BA6NKF7 163 aa10.27□□□□□ -0.77
SCARB2-220ENST00000640076 ZNF853P0CG23 659 aa10.27□□□□□ -0.77
SCARB2-220ENST00000640076 HDGFL1Q5TGJ6 251 aa10.27□□□□□ -0.77
SCARB2-220ENST00000640076 MPRIPQ6WCQ1 1025 aa10.27□□□□□ -0.77
SCARB2-220ENST00000640076 ATRNO75882 1429 aa10.27□□□□□ -0.77
SCARB2-220ENST00000640076 SCN11AQ9UI33 1791 aa10.27□□□□□ -0.77
SCARB2-220ENST00000640076 GNAI1P63096 354 aa10.26□□□□□ -0.77
SCARB2-220ENST00000640076 TSR2Q969E8 191 aaKnown RBP10.26□□□□□ -0.77
SCARB2-220ENST00000640076 LGR6Q9HBX8 967 aa10.26□□□□□ -0.77
SCARB2-220ENST00000640076 TRPC5Q9UL62 973 aaPredicted RBP10.26□□□□□ -0.77
SCARB2-220ENST00000640076 TBC1D2BQ9UPU7 963 aa10.26□□□□□ -0.77
SCARB2-220ENST00000640076 KDM6AO15550 1401 aaPredicted RBP10.26□□□□□ -0.77
SCARB2-220ENST00000640076 TNS2Q63HR2 1409 aa10.26□□□□□ -0.77
SCARB2-220ENST00000640076 FANCIQ9NVI1 1328 aa10.26□□□□□ -0.77
SCARB2-220ENST00000640076 GLI3P10071 1580 aa10.26□□□□□ -0.77
SCARB2-220ENST00000640076 RNMTO43148 476 aaKnown RBP10.26□□□□□ -0.77
SCARB2-220ENST00000640076 ADAMTS19Q8TE59 1207 aa10.26□□□□□ -0.77
SCARB2-220ENST00000640076 DRC1Q96MC2 740 aa10.26□□□□□ -0.77
SCARB2-220ENST00000640076 PHOX2BQ99453 314 aa10.26□□□□□ -0.77
SCARB2-220ENST00000640076 FAM217BQ9NTX9 383 aaPredicted RBP10.26□□□□□ -0.77
SCARB2-220ENST00000640076 LAS1LQ9Y4W2 734 aaKnown RBP10.26□□□□□ -0.77
SCARB2-220ENST00000640076 EXOC5O00471 708 aa10.25□□□□□ -0.77
SCARB2-220ENST00000640076 CHL1O00533 1208 aa10.25□□□□□ -0.77
SCARB2-220ENST00000640076 HSP90AB1P08238 724 aaKnown RBP10.25□□□□□ -0.77
SCARB2-220ENST00000640076 FAM98CQ17RN3 349 aaKnown RBP10.25□□□□□ -0.77
SCARB2-220ENST00000640076 DDX54Q8TDD1 881 aaKnown RBP10.25□□□□□ -0.77
SCARB2-220ENST00000640076 DCAF5Q96JK2 942 aa10.25□□□□□ -0.77
SCARB2-220ENST00000640076 GJD4Q96KN9 370 aaPredicted RBP10.25□□□□□ -0.77
SCARB2-220ENST00000640076 MBIPQ9NS73 344 aa10.25□□□□□ -0.77
SCARB2-220ENST00000640076 PTGER2P43116 358 aa10.25□□□□□ -0.77
SCARB2-220ENST00000640076 AKT1S1Q96B36 256 aa10.25□□□□□ -0.77
SCARB2-220ENST00000640076 SPATA32Q96LK8 384 aa10.25□□□□□ -0.77
SCARB2-220ENST00000640076 SIPA1L3O60292 1781 aaPredicted RBP10.24□□□□□ -0.77
SCARB2-220ENST00000640076 ERCC3P19447 782 aa10.24□□□□□ -0.77
SCARB2-220ENST00000640076 FOXK1P85037 733 aa10.24□□□□□ -0.77
SCARB2-220ENST00000640076 TEFQ10587 303 aa10.24□□□□□ -0.77
SCARB2-220ENST00000640076 TAF7Q15545 349 aaPredicted RBP10.24□□□□□ -0.77
SCARB2-220ENST00000640076 DDB1Q16531 1140 aa10.24□□□□□ -0.77
SCARB2-220ENST00000640076 PPP1R12CQ9BZL4 782 aa10.24□□□□□ -0.77
SCARB2-220ENST00000640076 QTRT2Q9H974 415 aaKnown RBP10.24□□□□□ -0.77
SCARB2-220ENST00000640076 BCCIPQ9P287 314 aaKnown RBP eCLIP10.24□□□□□ -0.77
SCARB2-220ENST00000640076 THSD7AQ9UPZ6 1657 aa10.24□□□□□ -0.77
SCARB2-220ENST00000640076 MRC1P22897 1456 aa10.23□□□□□ -0.77
SCARB2-220ENST00000640076 SMARCA5O60264 1052 aaPredicted RBP10.23□□□□□ -0.77
SCARB2-220ENST00000640076 BABAM1Q9NWV8 329 aa10.23□□□□□ -0.77
SCARB2-220ENST00000640076 PRIM1P49642 420 aaKnown RBP10.23□□□□□ -0.77
SCARB2-220ENST00000640076 ZNF772Q68DY9 489 aaPredicted RBP10.23□□□□□ -0.77
SCARB2-220ENST00000640076 MIS18AQ9NYP9 233 aa10.23□□□□□ -0.77
SCARB2-220ENST00000640076 TSPYL4Q9UJ04 414 aa10.23□□□□□ -0.77
SCARB2-220ENST00000640076 TOGARAM1Q9Y4F4 1720 aa10.22□□□□□ -0.77
SCARB2-220ENST00000640076 TCF3P15923 654 aa10.22□□□□□ -0.77
SCARB2-220ENST00000640076 MAP3K9P80192 1104 aa10.22□□□□□ -0.77
SCARB2-220ENST00000640076 EXOSC9Q06265 439 aaKnown RBP10.22□□□□□ -0.77
SCARB2-220ENST00000640076 SLC52A2Q9HAB3 445 aa10.22□□□□□ -0.77
SCARB2-220ENST00000640076 KDM3BQ7LBC6 1761 aa10.22□□□□□ -0.77
SCARB2-220ENST00000640076 MAP3K13O43283 966 aa10.21□□□□□ -0.77
SCARB2-220ENST00000640076 DNAJC14Q6Y2X3 702 aaPredicted RBP10.21□□□□□ -0.77
SCARB2-220ENST00000640076 SREK1Q8WXA9 508 aaKnown RBP10.21□□□□□ -0.77
SCARB2-220ENST00000640076 RCAN3Q9UKA8 241 aa10.21□□□□□ -0.77
SCARB2-220ENST00000640076 KAT6BQ8WYB5 2073 aa10.21□□□□□ -0.77
SCARB2-220ENST00000640076 ERVV-2B6SEH9 535 aa10.21□□□□□ -0.78
SCARB2-220ENST00000640076 MARCH10Q8NA82 808 aaPredicted RBP10.21□□□□□ -0.78
SCARB2-220ENST00000640076 NFATC2IPQ8NCF5 419 aa10.21□□□□□ -0.78
SCARB2-220ENST00000640076 A0A0G2JS52 829 aa10.2□□□□□ -0.78
SCARB2-220ENST00000640076 BTBD11A6QL63 1104 aa10.2□□□□□ -0.78
SCARB2-220ENST00000640076 ATG7O95352 703 aa10.2□□□□□ -0.78
SCARB2-220ENST00000640076 CT47B1P0C2W7 299 aaPredicted RBP10.2□□□□□ -0.78
SCARB2-220ENST00000640076 ZNF16P17020 682 aaPredicted RBP10.2□□□□□ -0.78
SCARB2-220ENST00000640076 CABP4P57796 275 aa10.2□□□□□ -0.78
SCARB2-220ENST00000640076 DDX12PQ92771 950 aa10.2□□□□□ -0.78
SCARB2-220ENST00000640076 CWC22Q9HCG8 908 aaKnown RBP10.2□□□□□ -0.78
SCARB2-220ENST00000640076 KRT24Q2M2I5 525 aa10.19□□□□□ -0.78
SCARB2-220ENST00000640076 TSPYL6Q8N831 410 aa10.19□□□□□ -0.78
SCARB2-220ENST00000640076 C8orf58Q8NAV2 365 aa10.19□□□□□ -0.78
SCARB2-220ENST00000640076 TBC1D2Q9BYX2 928 aa10.19□□□□□ -0.78
SCARB2-220ENST00000640076 ITGB4P16144 1822 aa10.19□□□□□ -0.78
SCARB2-220ENST00000640076 SUPT16HQ9Y5B9 1047 aaKnown RBP10.19□□□□□ -0.78
SCARB2-220ENST00000640076 DOT1LQ8TEK3 1739 aa10.18□□□□□ -0.78
SCARB2-220ENST00000640076 KCNQ3O43525 872 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms