RNA–Protein interactions for RNA: ENST00000640056.1

HNRNPU-224, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-224ENST00000640056 PRPF40AO75400 957 aaKnown RBP12.23□□□□□ -0.45
HNRNPU-224ENST00000640056 FBLN1P23142 703 aa12.23□□□□□ -0.45
HNRNPU-224ENST00000640056 PRIM1P49642 420 aaKnown RBP12.23□□□□□ -0.45
HNRNPU-224ENST00000640056 PKP1Q13835 747 aa12.23□□□□□ -0.45
HNRNPU-224ENST00000640056 CHD4Q14839 1912 aa12.23□□□□□ -0.45
HNRNPU-224ENST00000640056 SDSP20132 328 aa12.23□□□□□ -0.45
HNRNPU-224ENST00000640056 REC8O95072 547 aa12.22□□□□□ -0.45
HNRNPU-224ENST00000640056 GPT2Q8TD30 523 aa12.22□□□□□ -0.45
HNRNPU-224ENST00000640056 LTV1Q96GA3 475 aaPredicted RBP12.22□□□□□ -0.45
HNRNPU-224ENST00000640056 RGPD5Q99666 1765 aa12.22□□□□□ -0.45
HNRNPU-224ENST00000640056 NUP188Q5SRE5 1749 aa12.22□□□□□ -0.45
HNRNPU-224ENST00000640056 MCM5P33992 734 aa12.21□□□□□ -0.45
HNRNPU-224ENST00000640056 RRS1Q15050 365 aaKnown RBP12.21□□□□□ -0.45
HNRNPU-224ENST00000640056 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.21□□□□□ -0.45
HNRNPU-224ENST00000640056 ZDHHC9Q9Y397 364 aa12.21□□□□□ -0.45
HNRNPU-224ENST00000640056 KIF20BQ96Q89 1820 aa12.21□□□□□ -0.45
HNRNPU-224ENST00000640056 HMGB2P26583 209 aaKnown RBP12.21□□□□□ -0.46
HNRNPU-224ENST00000640056 TXNRD1Q16881 649 aa12.21□□□□□ -0.46
HNRNPU-224ENST00000640056 LRSAM1Q6UWE0 723 aa12.21□□□□□ -0.46
HNRNPU-224ENST00000640056 ZGPATQ8N5A5 531 aaKnown RBP12.21□□□□□ -0.46
HNRNPU-224ENST00000640056 CEP85Q6P2H3 762 aa12.2□□□□□ -0.46
HNRNPU-224ENST00000640056 ZCRB1Q8TBF4 217 aaKnown RBP12.2□□□□□ -0.46
HNRNPU-224ENST00000640056 OTUD7AQ8TE49 926 aaPredicted RBP12.2□□□□□ -0.46
HNRNPU-224ENST00000640056 RAPGEF4Q8WZA2 1011 aa12.2□□□□□ -0.46
HNRNPU-224ENST00000640056 NHSQ6T4R5 1651 aa12.2□□□□□ -0.46
HNRNPU-224ENST00000640056 CSPP1Q1MSJ5 1256 aa12.2□□□□□ -0.46
HNRNPU-224ENST00000640056 PROM2Q8N271 834 aa12.2□□□□□ -0.46
HNRNPU-224ENST00000640056 MAP7D2Q96T17 732 aa12.2□□□□□ -0.46
HNRNPU-224ENST00000640056 STK32BQ9NY57 414 aa12.2□□□□□ -0.46
HNRNPU-224ENST00000640056 ZKSCAN5Q9Y2L8 839 aa12.2□□□□□ -0.46
HNRNPU-224ENST00000640056 R3HCC1Q9Y3T6 440 aaKnown RBP12.2□□□□□ -0.46
HNRNPU-224ENST00000640056 EMILIN1Q9Y6C2 1016 aa12.2□□□□□ -0.46
HNRNPU-224ENST00000640056 AK9Q5TCS8 1911 aa12.19□□□□□ -0.46
HNRNPU-224ENST00000640056 ATP10DQ9P241 1426 aa12.19□□□□□ -0.46
HNRNPU-224ENST00000640056 PLEKHG2Q9H7P9 1386 aa12.19□□□□□ -0.46
HNRNPU-224ENST00000640056 ERC2O15083 957 aa12.19□□□□□ -0.46
HNRNPU-224ENST00000640056 NBPF6Q5VWK0 638 aa12.19□□□□□ -0.46
HNRNPU-224ENST00000640056 PTF1AQ7RTS3 328 aa12.19□□□□□ -0.46
HNRNPU-224ENST00000640056 NBPF4Q96M43 638 aa12.19□□□□□ -0.46
HNRNPU-224ENST00000640056 TATP17735 454 aaPredicted RBP12.18□□□□□ -0.46
HNRNPU-224ENST00000640056 HSP90AB2PQ58FF8 381 aa12.18□□□□□ -0.46
HNRNPU-224ENST00000640056 DDX54Q8TDD1 881 aaKnown RBP12.18□□□□□ -0.46
HNRNPU-224ENST00000640056 TMEM63CQ9P1W3 806 aa12.18□□□□□ -0.46
HNRNPU-224ENST00000640056 RBM27Q9P2N5 1060 aaKnown RBP12.18□□□□□ -0.46
HNRNPU-224ENST00000640056 WWC3Q9ULE0 1092 aa12.18□□□□□ -0.46
HNRNPU-224ENST00000640056 SBF2Q86WG5 1849 aa12.18□□□□□ -0.46
HNRNPU-224ENST00000640056 MBD3O95983 291 aa12.18□□□□□ -0.46
HNRNPU-224ENST00000640056 SLC27A3Q5K4L6 730 aa12.18□□□□□ -0.46
HNRNPU-224ENST00000640056 DNAJC5GQ8N7S2 189 aa12.18□□□□□ -0.46
HNRNPU-224ENST00000640056 ACSBG1Q96GR2 724 aa12.18□□□□□ -0.46
HNRNPU-224ENST00000640056 OSBPL3Q9H4L5 887 aa12.18□□□□□ -0.46
HNRNPU-224ENST00000640056 CCDC39Q9UFE4 941 aa12.18□□□□□ -0.46
HNRNPU-224ENST00000640056 SMARCA5O60264 1052 aaPredicted RBP12.17□□□□□ -0.46
HNRNPU-224ENST00000640056 MCM2P49736 904 aa12.17□□□□□ -0.46
HNRNPU-224ENST00000640056 APLP1P51693 650 aa12.17□□□□□ -0.46
HNRNPU-224ENST00000640056 SLC15A2Q16348 729 aa12.17□□□□□ -0.46
HNRNPU-224ENST00000640056 MAP2P11137 1827 aaKnown RBP12.17□□□□□ -0.46
HNRNPU-224ENST00000640056 PTPRCP08575 1304 aa12.17□□□□□ -0.46
HNRNPU-224ENST00000640056 PCDH11XQ9BZA7 1347 aa12.17□□□□□ -0.46
HNRNPU-224ENST00000640056 PCDH11YQ9BZA8 1340 aa12.17□□□□□ -0.46
HNRNPU-224ENST00000640056 MEGF6O75095 1541 aa12.17□□□□□ -0.46
HNRNPU-224ENST00000640056 SYCE3A1L190 88 aa12.16□□□□□ -0.46
HNRNPU-224ENST00000640056 NCAPD2Q15021 1401 aa12.16□□□□□ -0.46
HNRNPU-224ENST00000640056 DCTN1Q14203 1278 aa12.16□□□□□ -0.46
HNRNPU-224ENST00000640056 RBM10P98175 930 aaKnown RBP12.15□□□□□ -0.46
HNRNPU-224ENST00000640056 TMX3Q96JJ7 454 aa12.15□□□□□ -0.46
HNRNPU-224ENST00000640056 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.15□□□□□ -0.462e-15■■■■□ 21.8
HNRNPU-224ENST00000640056 NSFL1CQ9UNZ2 370 aaKnown RBP12.15□□□□□ -0.46
HNRNPU-224ENST00000640056 CHL1O00533 1208 aa12.15□□□□□ -0.47
HNRNPU-224ENST00000640056 HMMRO75330 724 aa12.15□□□□□ -0.47
HNRNPU-224ENST00000640056 BRD1O95696 1058 aa12.15□□□□□ -0.47
HNRNPU-224ENST00000640056 NEK4P51957 841 aa12.15□□□□□ -0.47
HNRNPU-224ENST00000640056 UQCRHLA0A096LP55 91 aa12.14□□□□□ -0.47
HNRNPU-224ENST00000640056 APBB1O00213 710 aa12.14□□□□□ -0.47
HNRNPU-224ENST00000640056 DYNC1I1O14576 645 aa12.14□□□□□ -0.47
HNRNPU-224ENST00000640056 UQCRHP07919 91 aa12.14□□□□□ -0.47
HNRNPU-224ENST00000640056 CUL4AQ13619 759 aa12.14□□□□□ -0.47
HNRNPU-224ENST00000640056 MTERF4Q7Z6M4 381 aaKnown RBP12.14□□□□□ -0.47
HNRNPU-224ENST00000640056 MEIS3Q99687 375 aa12.14□□□□□ -0.47
HNRNPU-224ENST00000640056 FAM13BQ9NYF5 915 aa12.14□□□□□ -0.47
HNRNPU-224ENST00000640056 PDE1AP54750 535 aa12.13□□□□□ -0.47
HNRNPU-224ENST00000640056 INTS4Q96HW7 963 aaKnown RBP12.13□□□□□ -0.47
HNRNPU-224ENST00000640056 CHAMP1Q96JM3 812 aa12.13□□□□□ -0.47
HNRNPU-224ENST00000640056 SPG7Q9UQ90 795 aa12.13□□□□□ -0.47
HNRNPU-224ENST00000640056 DLG5Q8TDM6 1919 aa12.12□□□□□ -0.47
HNRNPU-224ENST00000640056 ANAPC15P60006 121 aa12.12□□□□□ -0.47
HNRNPU-224ENST00000640056 SASS6Q6UVJ0 657 aa12.12□□□□□ -0.47
HNRNPU-224ENST00000640056 USHBP1Q8N6Y0 703 aa12.12□□□□□ -0.47
HNRNPU-224ENST00000640056 SYAP1Q96A49 352 aaPredicted RBP12.12□□□□□ -0.47
HNRNPU-224ENST00000640056 SYTL4Q96C24 671 aaPredicted RBP12.12□□□□□ -0.47
HNRNPU-224ENST00000640056 MTFR1LQ9H019 292 aa12.12□□□□□ -0.47
HNRNPU-224ENST00000640056 MCCP23508 829 aa12.11□□□□□ -0.47
HNRNPU-224ENST00000640056 KRT24Q2M2I5 525 aa12.11□□□□□ -0.47
HNRNPU-224ENST00000640056 SLC16A10Q8TF71 515 aa12.11□□□□□ -0.47
HNRNPU-224ENST00000640056 TSPY26PQ9H489 355 aa12.11□□□□□ -0.47
HNRNPU-224ENST00000640056 PAPPAQ13219 1627 aa12.11□□□□□ -0.47
HNRNPU-224ENST00000640056 NKX1-1Q15270 411 aaPredicted RBP12.11□□□□□ -0.47
HNRNPU-224ENST00000640056 FOXD4L5Q5VV16 416 aaPredicted RBP12.11□□□□□ -0.47
HNRNPU-224ENST00000640056 RNF214Q8ND24 703 aa12.11□□□□□ -0.47
HNRNPU-224ENST00000640056 FOXD4L4Q8WXT5 416 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms