RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-223	ENST00000640001	SLC52A2	Q9HAB3	445 aa		9.29	□□□□□ -0.92
HNRNPU-223	ENST00000640001	IBTK	Q9P2D0	1353 aa	Predicted RBP	9.29	□□□□□ -0.92
HNRNPU-223	ENST00000640001	CCDC83	Q8IWF9	413 aa		9.29	□□□□□ -0.92
HNRNPU-223	ENST00000640001	DCAF5	Q96JK2	942 aa		9.29	□□□□□ -0.92
HNRNPU-223	ENST00000640001	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	9.29	□□□□□ -0.92
HNRNPU-223	ENST00000640001	PHF14	O94880	888 aa		9.29	□□□□□ -0.92
HNRNPU-223	ENST00000640001	CSPP1	Q1MSJ5	1256 aa		9.29	□□□□□ -0.92
HNRNPU-223	ENST00000640001	DNTTIP2	Q5QJE6	756 aa	Known RBP	9.29	□□□□□ -0.92
HNRNPU-223	ENST00000640001	PANK2	Q9BZ23	570 aa		9.29	□□□□□ -0.92
HNRNPU-223	ENST00000640001	GDPD2	Q9HCC8	539 aa		9.29	□□□□□ -0.92
HNRNPU-223	ENST00000640001	TMOD3	Q9NYL9	352 aa		9.29	□□□□□ -0.92
HNRNPU-223	ENST00000640001	ADGRL3	Q9HAR2	1447 aa		9.29	□□□□□ -0.92
HNRNPU-223	ENST00000640001	WDR33	Q9C0J8	1336 aa	Known RBP	9.29	□□□□□ -0.92
HNRNPU-223	ENST00000640001	EVI5L	Q96CN4	794 aa		9.29	□□□□□ -0.92
HNRNPU-223	ENST00000640001	BLOC1S2	Q6QNY1	142 aa		9.28	□□□□□ -0.92
HNRNPU-223	ENST00000640001	PALD1	Q9ULE6	856 aa		9.28	□□□□□ -0.92
HNRNPU-223	ENST00000640001	ERBB3	P21860	1342 aa		9.28	□□□□□ -0.92
HNRNPU-223	ENST00000640001	FKBP4	Q02790	459 aa	Known RBP eCLIP	9.28	□□□□□ -0.92
HNRNPU-223	ENST00000640001	ZRSR1	Q15695	479 aa	Known RBP	9.28	□□□□□ -0.92
HNRNPU-223	ENST00000640001	CCDC57	Q2TAC2	916 aa		9.28	□□□□□ -0.92
HNRNPU-223	ENST00000640001	USP16	Q9Y5T5	823 aa		9.28	□□□□□ -0.92
HNRNPU-223	ENST00000640001	MBD3	O95983	291 aa		9.27	□□□□□ -0.92
HNRNPU-223	ENST00000640001	XRCC6	P12956	609 aa	Known RBP eCLIP	9.27	□□□□□ -0.92
HNRNPU-223	ENST00000640001	CPA1	P15085	419 aa		9.27	□□□□□ -0.92
HNRNPU-223	ENST00000640001	PHKG2	P15735	406 aa		9.27	□□□□□ -0.92
HNRNPU-223	ENST00000640001	LMBR1L	Q6UX01	489 aa		9.27	□□□□□ -0.92
HNRNPU-223	ENST00000640001	TCEANC2	Q96MN5	208 aa		9.27	□□□□□ -0.92
HNRNPU-223	ENST00000640001	DTNB	O60941	627 aa		9.27	□□□□□ -0.93
HNRNPU-223	ENST00000640001	APP	P05067	770 aa		9.27	□□□□□ -0.93
HNRNPU-223	ENST00000640001	RBM27	Q9P2N5	1060 aa	Known RBP	9.27	□□□□□ -0.93
HNRNPU-223	ENST00000640001	ANAPC15	P60006	121 aa		9.27	□□□□□ -0.93
HNRNPU-223	ENST00000640001	CEP126	Q9P2H0	1117 aa		9.27	□□□□□ -0.93
HNRNPU-223	ENST00000640001	LIMCH1	Q9UPQ0	1083 aa		9.27	□□□□□ -0.93
HNRNPU-223	ENST00000640001	ATP10D	Q9P241	1426 aa		9.27	□□□□□ -0.93
HNRNPU-223	ENST00000640001	TOMM22	Q9NS69	142 aa		9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	TTC41P	Q6P2S7	1318 aa		9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	GPT	P24298	496 aa		9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	GTF2E1	P29083	439 aa	Predicted RBP	9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	OSBPL3	Q9H4L5	887 aa		9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	CWC25	Q9NXE8	425 aa	Predicted RBP	9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	ANKRD26	Q9UPS8	1709 aa		9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	SYCE3	A1L190	88 aa		9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	NMI	Q13287	307 aa	Predicted RBP	9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	PKP1	Q13835	747 aa		9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	DDX46	Q7L014	1031 aa	Known RBP	9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	FERMT3	Q86UX7	667 aa		9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	UBR1	Q8IWV7	1749 aa		9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	NUTM2B	A6NNL0	878 aa	Predicted RBP	9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	NUTM2E	B1AL46	878 aa	Predicted RBP	9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	TTC39A	Q5SRH9	613 aa		9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	NUTM2A	Q8IVF1	878 aa	Predicted RBP	9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	METTL22	Q9BUU2	404 aa	Predicted RBP	9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	CNNM1	Q9NRU3	951 aa		9.26	□□□□□ -0.93
HNRNPU-223	ENST00000640001	GNL2	Q13823	731 aa	Known RBP	9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	LRRFIP1	Q32MZ4	808 aa	Known RBP	9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	LARP1B	Q659C4	914 aa	Known RBP	9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	KIF2C	Q99661	725 aa		9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	RBM8A	Q9Y5S9	174 aa	Known RBP	9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	SGSM2	O43147	1006 aa		9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	GCKR	Q14397	625 aa		9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	KLHL40	Q2TBA0	621 aa		9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	NRK	Q7Z2Y5	1582 aa		9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	GOLIM4	O00461	696 aa		9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	STARD3NL	O95772	234 aa		9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	A1BG	P04217	495 aa		9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	IL2RB	P14784	551 aa		9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	TFCP2	Q12800	502 aa		9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	CCDC158	Q5M9N0	1113 aa		9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	NECAB1	Q8N987	351 aa		9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	ISY1	Q9ULR0	285 aa	Known RBP	9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	NRXN3	Q9Y4C0	1643 aa		9.25	□□□□□ -0.93
HNRNPU-223	ENST00000640001	DRC7	Q8IY82	874 aa		9.24	□□□□□ -0.93
HNRNPU-223	ENST00000640001	CHAMP1	Q96JM3	812 aa		9.24	□□□□□ -0.93
HNRNPU-223	ENST00000640001	SNRK	Q9NRH2	765 aa		9.24	□□□□□ -0.93
HNRNPU-223	ENST00000640001	STAP2	Q9UGK3	403 aa		9.24	□□□□□ -0.93
HNRNPU-223	ENST00000640001	NDUFB9	Q9Y6M9	179 aa		9.24	□□□□□ -0.93
HNRNPU-223	ENST00000640001	AOX1	Q06278	1338 aa		9.24	□□□□□ -0.93
HNRNPU-223	ENST00000640001	ADAMTS2	O95450	1211 aa		9.24	□□□□□ -0.93
HNRNPU-223	ENST00000640001	AK2	P54819	239 aa		9.24	□□□□□ -0.93
HNRNPU-223	ENST00000640001	BICD2	Q8TD16	824 aa		9.24	□□□□□ -0.93
HNRNPU-223	ENST00000640001	ZSCAN31	Q96LW9	406 aa	Predicted RBP	9.24	□□□□□ -0.93
HNRNPU-223	ENST00000640001	FAM227B	Q96M60	508 aa		9.24	□□□□□ -0.93
HNRNPU-223	ENST00000640001	KIF3A	Q9Y496	699 aa		9.24	□□□□□ -0.93
HNRNPU-223	ENST00000640001	ARHGAP23	Q9P227	1491 aa		9.24	□□□□□ -0.93
HNRNPU-223	ENST00000640001	NEURL1B	A8MQ27	555 aa		9.24	□□□□□ -0.93
HNRNPU-223	ENST00000640001	IFIT1	P09914	478 aa	Known RBP	9.24	□□□□□ -0.93
HNRNPU-223	ENST00000640001	SLIT1	O75093	1534 aa		9.23	□□□□□ -0.93
HNRNPU-223	ENST00000640001	SSH2	Q76I76	1423 aa		9.23	□□□□□ -0.93
HNRNPU-223	ENST00000640001	FAM43A	Q8N2R8	423 aa		9.23	□□□□□ -0.93
HNRNPU-223	ENST00000640001	ANKRD1	Q15327	319 aa		9.23	□□□□□ -0.93
HNRNPU-223	ENST00000640001	EAF2	Q96CJ1	260 aa	Predicted RBP	9.23	□□□□□ -0.93
HNRNPU-223	ENST00000640001	EDC3	Q96F86	508 aa	Known RBP	9.23	□□□□□ -0.93
HNRNPU-223	ENST00000640001	DDX11	Q96FC9	970 aa		9.23	□□□□□ -0.93
HNRNPU-223	ENST00000640001	SNX14	Q9Y5W7	946 aa		9.23	□□□□□ -0.93
HNRNPU-223	ENST00000640001	GJB2	P29033	226 aa		9.23	□□□□□ -0.93
HNRNPU-223	ENST00000640001	RAD50	Q92878	1312 aa		9.23	□□□□□ -0.93
HNRNPU-223	ENST00000640001	PDC	P20941	246 aa		9.23	□□□□□ -0.93
HNRNPU-223	ENST00000640001	CEBPZ	Q03701	1054 aa	Known RBP	9.23	□□□□□ -0.93

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