RNA–Protein interactions for RNA: ENST00000639394.1

PAX6-256, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 1,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-256	ENST00000639394	GRIK3	Q13003	919 aa		12.86	□□□□□ -0.35
PAX6-256	ENST00000639394	CCDC184	Q52MB2	194 aa		12.86	□□□□□ -0.35
PAX6-256	ENST00000639394	CCDC125	Q86Z20	511 aa		12.86	□□□□□ -0.35
PAX6-256	ENST00000639394	NFATC2IP	Q8NCF5	419 aa		12.86	□□□□□ -0.35
PAX6-256	ENST00000639394	JARID2	Q92833	1246 aa	Predicted RBP	12.86	□□□□□ -0.35
PAX6-256	ENST00000639394	ARPC5L	Q9BPX5	153 aa		12.86	□□□□□ -0.35
PAX6-256	ENST00000639394	ROCK2	O75116	1388 aa	Known RBP	12.86	□□□□□ -0.35
PAX6-256	ENST00000639394	SPATA31D1	Q6ZQQ2	1576 aa		12.86	□□□□□ -0.35
PAX6-256	ENST00000639394	PAX3	P23760	479 aa		12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	CRYM	Q14894	314 aa		12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	RAB3GAP1	Q15042	981 aa		12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	E2F4	Q16254	413 aa		12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	ZKSCAN2	Q63HK3	967 aa		12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	CAVIN1	Q6NZI2	390 aa	Known RBP	12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	NOL8	Q76FK4	1167 aa	Known RBP	12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	CADPS2	Q86UW7	1296 aa		12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	SYAP1	Q96A49	352 aa	Predicted RBP	12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	AK7	Q96M32	723 aa		12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	FAM107B	Q9H098	131 aa		12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	ESF1	Q9H501	851 aa	Known RBP	12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	MROH2A	A6NES4	1674 aa		12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	NEBL	O76041	1014 aa		12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	RPS6KA3	P51812	740 aa		12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	NAIF1	Q69YI7	327 aa	Predicted RBP	12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	ARMC2	Q8NEN0	867 aa		12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	DNAAF4	Q8WXU2	420 aa		12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	HIRIP3	Q9BW71	556 aa	Predicted RBP	12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	RMI1	Q9H9A7	625 aa		12.85	□□□□□ -0.35
PAX6-256	ENST00000639394	SMAP	O00193	183 aa		12.84	□□□□□ -0.35
PAX6-256	ENST00000639394	MYBL2	P10244	700 aa		12.84	□□□□□ -0.35
PAX6-256	ENST00000639394	PDIA5	Q14554	519 aa		12.84	□□□□□ -0.35
PAX6-256	ENST00000639394	FILIP1L	Q4L180	1135 aa		12.84	□□□□□ -0.35
PAX6-256	ENST00000639394	WDR78	Q5VTH9	848 aa		12.84	□□□□□ -0.35
PAX6-256	ENST00000639394	TTC19	Q6DKK2	380 aa	Predicted RBP	12.84	□□□□□ -0.35
PAX6-256	ENST00000639394	NCAPG2	Q86XI2	1143 aa		12.84	□□□□□ -0.35
PAX6-256	ENST00000639394	PRAG1	Q86YV5	1406 aa		12.84	□□□□□ -0.35
PAX6-256	ENST00000639394	OGFOD1	Q8N543	542 aa		12.84	□□□□□ -0.35
PAX6-256	ENST00000639394	SNX21	Q969T3	373 aa		12.84	□□□□□ -0.35
PAX6-256	ENST00000639394	CRACR2A	Q9BSW2	395 aa		12.84	□□□□□ -0.35
PAX6-256	ENST00000639394	LRRFIP2	Q9Y608	721 aa	Known RBP	12.84	□□□□□ -0.35
PAX6-256	ENST00000639394	HMGB1P1	B2RPK0	211 aa	Predicted RBP	12.83	□□□□□ -0.35
PAX6-256	ENST00000639394	GPT2	Q8TD30	523 aa		12.83	□□□□□ -0.35
PAX6-256	ENST00000639394	RBSN	Q9H1K0	784 aa		12.83	□□□□□ -0.35
PAX6-256	ENST00000639394	GNL3L	Q9NVN8	582 aa	Known RBP	12.83	□□□□□ -0.35
PAX6-256	ENST00000639394	UTP6	Q9NYH9	597 aa	Known RBP	12.83	□□□□□ -0.35
PAX6-256	ENST00000639394	KIF2A	O00139	706 aa	Predicted RBP	12.83	□□□□□ -0.36
PAX6-256	ENST00000639394	BRD1	O95696	1058 aa		12.83	□□□□□ -0.36
PAX6-256	ENST00000639394	GCFC2	P16383	781 aa	Known RBP	12.83	□□□□□ -0.36
PAX6-256	ENST00000639394	KLHL10	Q6JEL2	608 aa		12.83	□□□□□ -0.36
PAX6-256	ENST00000639394	CACTIN-AS1	Q8N1I8	211 aa		12.83	□□□□□ -0.36
PAX6-256	ENST00000639394	C17orf50	Q8WW18	174 aa		12.83	□□□□□ -0.36
PAX6-256	ENST00000639394	TRIM6	Q9C030	488 aa	Predicted RBP	12.83	□□□□□ -0.36
PAX6-256	ENST00000639394	RALGAPB	Q86X10	1494 aa		12.82	□□□□□ -0.36
PAX6-256	ENST00000639394	SNUPN	O95149	360 aa	Known RBP	12.82	□□□□□ -0.36
PAX6-256	ENST00000639394	PSMC1	P62191	440 aa	Known RBP	12.82	□□□□□ -0.36
PAX6-256	ENST00000639394	IDI1	Q13907	227 aa		12.82	□□□□□ -0.36
PAX6-256	ENST00000639394	PUS10	Q3MIT2	529 aa	Known RBP	12.82	□□□□□ -0.36
PAX6-256	ENST00000639394	HSCB	Q8IWL3	235 aa		12.82	□□□□□ -0.36
PAX6-256	ENST00000639394	KCNV2	Q8TDN2	545 aa		12.82	□□□□□ -0.36
PAX6-256	ENST00000639394	BLOC1S6	Q9UL45	172 aa		12.82	□□□□□ -0.36
PAX6-256	ENST00000639394	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
PAX6-256	ENST00000639394	PSMD2	Q13200	908 aa		12.81	□□□□□ -0.36
PAX6-256	ENST00000639394	TMED1	Q13445	227 aa		12.81	□□□□□ -0.36
PAX6-256	ENST00000639394	NEDD9	Q14511	834 aa		12.81	□□□□□ -0.36
PAX6-256	ENST00000639394	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.81	□□□□□ -0.36
PAX6-256	ENST00000639394	SMC5	Q8IY18	1101 aa		12.81	□□□□□ -0.36
PAX6-256	ENST00000639394	RNF214	Q8ND24	703 aa		12.81	□□□□□ -0.36
PAX6-256	ENST00000639394	SLX1A	Q9BQ83	275 aa		12.81	□□□□□ -0.36
PAX6-256	ENST00000639394	FER1L4	A9Z1Z3	1794 aa		12.81	□□□□□ -0.36
PAX6-256	ENST00000639394	ATP8B1	O43520	1251 aa		12.81	□□□□□ -0.36
PAX6-256	ENST00000639394	ERC1	Q8IUD2	1116 aa		12.81	□□□□□ -0.36
PAX6-256	ENST00000639394	CFAP53	Q96M91	514 aa		12.81	□□□□□ -0.36
PAX6-256	ENST00000639394	SENP3	Q9H4L4	574 aa	Predicted RBP	12.81	□□□□□ -0.36
PAX6-256	ENST00000639394	IFT172	Q9UG01	1749 aa		12.81	□□□□□ -0.36
PAX6-256	ENST00000639394	NAT1	P18440	290 aa		12.8	□□□□□ -0.36
PAX6-256	ENST00000639394	RHBDL3	P58872	404 aa		12.8	□□□□□ -0.36
PAX6-256	ENST00000639394	GORAB	Q5T7V8	394 aa		12.8	□□□□□ -0.36
PAX6-256	ENST00000639394	NFXL1	Q6ZNB6	911 aa		12.8	□□□□□ -0.36
PAX6-256	ENST00000639394	RMDN2	Q96LZ7	410 aa		12.8	□□□□□ -0.36
PAX6-256	ENST00000639394	LCMT1	Q9UIC8	334 aa		12.8	□□□□□ -0.36
PAX6-256	ENST00000639394	AKAP2	Q9Y2D5	859 aa		12.8	□□□□□ -0.36
PAX6-256	ENST00000639394	MYOM2	P54296	1465 aa		12.8	□□□□□ -0.36
PAX6-256	ENST00000639394	ELF1	P32519	619 aa		12.8	□□□□□ -0.36
PAX6-256	ENST00000639394	CORO7	P57737	925 aa		12.8	□□□□□ -0.36
PAX6-256	ENST00000639394	TBC1D8B	Q0IIM8	1120 aa		12.8	□□□□□ -0.36
PAX6-256	ENST00000639394	TBC1D25	Q3MII6	688 aa		12.8	□□□□□ -0.36
PAX6-256	ENST00000639394	TCP11	Q8WWU5	503 aa		12.8	□□□□□ -0.36
PAX6-256	ENST00000639394	TMEM131L	A2VDJ0	1609 aa		12.79	□□□□□ -0.36
PAX6-256	ENST00000639394	TRPM1	Q7Z4N2	1603 aa		12.79	□□□□□ -0.36
PAX6-256	ENST00000639394	MADD	Q8WXG6	1647 aa		12.79	□□□□□ -0.36
PAX6-256	ENST00000639394	RBM47	A0AV96	593 aa	Known RBP	12.79	□□□□□ -0.36
PAX6-256	ENST00000639394	IPO5	O00410	1097 aa	Known RBP	12.79	□□□□□ -0.36
PAX6-256	ENST00000639394	EPB41L2	O43491	1005 aa	Known RBP	12.79	□□□□□ -0.36
PAX6-256	ENST00000639394	RPS6KA5	O75582	802 aa		12.79	□□□□□ -0.36
PAX6-256	ENST00000639394	OAT	P04181	439 aa		12.79	□□□□□ -0.36
PAX6-256	ENST00000639394	CHGA	P10645	457 aa	Known RBP	12.79	□□□□□ -0.36
PAX6-256	ENST00000639394	FOXD4	Q12950	439 aa	Predicted RBP	12.79	□□□□□ -0.36
PAX6-256	ENST00000639394	ZSCAN23	Q3MJ62	389 aa		12.79	□□□□□ -0.36
PAX6-256	ENST00000639394	LRSAM1	Q6UWE0	723 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 196.5 ms