RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 SLC10A3P09131 477 aa5.38□□□□□ -1.55
CCDC7-213ENST00000639290 TRAPPC3LQ5T215 181 aa5.38□□□□□ -1.55
CCDC7-213ENST00000639290 ZC3H15Q8WU90 426 aaKnown RBP5.38□□□□□ -1.55
CCDC7-213ENST00000639290 PRAM1Q96QH2 718 aa5.38□□□□□ -1.55
CCDC7-213ENST00000639290 PHF14O94880 888 aa5.38□□□□□ -1.55
CCDC7-213ENST00000639290 CELF2O95319 508 aaKnown RBP5.38□□□□□ -1.55
CCDC7-213ENST00000639290 GYS1P13807 737 aa5.38□□□□□ -1.55
CCDC7-213ENST00000639290 EN2P19622 333 aaPredicted RBP5.38□□□□□ -1.55
CCDC7-213ENST00000639290 LMOD1P29536 600 aaPredicted RBP5.38□□□□□ -1.55
CCDC7-213ENST00000639290 KCTD2Q14681 263 aa5.38□□□□□ -1.55
CCDC7-213ENST00000639290 MRC1P22897 1456 aa5.38□□□□□ -1.55
CCDC7-213ENST00000639290 GPR25O00155 361 aa5.37□□□□□ -1.55
CCDC7-213ENST00000639290 ITGB8P26012 769 aa5.37□□□□□ -1.55
CCDC7-213ENST00000639290 C14orf93Q9H972 538 aaKnown RBP5.37□□□□□ -1.55
CCDC7-213ENST00000639290 POGKQ9P215 609 aa5.37□□□□□ -1.55
CCDC7-213ENST00000639290 ZNF609O15014 1411 aa5.37□□□□□ -1.55
CCDC7-213ENST00000639290 PIEZO1Q92508 2521 aa5.36□□□□□ -1.55
CCDC7-213ENST00000639290 CDHR2Q9BYE9 1310 aa5.36□□□□□ -1.55
CCDC7-213ENST00000639290 SSC5DA1L4H1 1573 aa5.36□□□□□ -1.55
CCDC7-213ENST00000639290 AMIGO3Q86WK7 504 aa5.36□□□□□ -1.55
CCDC7-213ENST00000639290 MAFAQ8NHW3 353 aaPredicted RBP5.36□□□□□ -1.55
CCDC7-213ENST00000639290 NKX2-3Q8TAU0 364 aa5.36□□□□□ -1.55
CCDC7-213ENST00000639290 SYTL4Q96C24 671 aaPredicted RBP5.36□□□□□ -1.55
CCDC7-213ENST00000639290 NUDT16Q96DE0 195 aaKnown RBP5.36□□□□□ -1.55
CCDC7-213ENST00000639290 RTCBQ9Y3I0 505 aaKnown RBP5.36□□□□□ -1.55
CCDC7-213ENST00000639290 COL5A3P25940 1745 aaPredicted RBP5.36□□□□□ -1.55
CCDC7-213ENST00000639290 CNTNAP4Q9C0A0 1308 aa5.36□□□□□ -1.55
CCDC7-213ENST00000639290 CHRNA5P30532 468 aa5.36□□□□□ -1.55
CCDC7-213ENST00000639290 NUTM2GQ5VZR2 741 aa5.36□□□□□ -1.55
CCDC7-213ENST00000639290 ATXN2LQ8WWM7 1075 aaKnown RBP5.36□□□□□ -1.55
CCDC7-213ENST00000639290 ZNF333Q96JL9 665 aa5.36□□□□□ -1.55
CCDC7-213ENST00000639290 GUCD1Q96NT3 240 aa5.36□□□□□ -1.55
CCDC7-213ENST00000639290 CSRNP1Q96S65 589 aa5.36□□□□□ -1.55
CCDC7-213ENST00000639290 FZD9O00144 591 aa5.35□□□□□ -1.55
CCDC7-213ENST00000639290 GNPATO15228 680 aa5.35□□□□□ -1.55
CCDC7-213ENST00000639290 NBPF11Q86T75 865 aa5.35□□□□□ -1.55
CCDC7-213ENST00000639290 VSIG10Q8N0Z9 540 aa5.35□□□□□ -1.55
CCDC7-213ENST00000639290 PTPN22Q9Y2R2 807 aa5.35□□□□□ -1.55
CCDC7-213ENST00000639290 CCDC61Q9Y6R9 512 aa5.35□□□□□ -1.55
CCDC7-213ENST00000639290 ADGRF5Q8IZF2 1346 aa5.35□□□□□ -1.55
CCDC7-213ENST00000639290 RGL2O15211 777 aa5.35□□□□□ -1.55
CCDC7-213ENST00000639290 SRPK2P78362 688 aaKnown RBP5.35□□□□□ -1.55
CCDC7-213ENST00000639290 TPRNQ4KMQ1 711 aa5.35□□□□□ -1.55
CCDC7-213ENST00000639290 BICDL1Q6ZP65 573 aa5.35□□□□□ -1.55
CCDC7-213ENST00000639290 LRFN3Q9BTN0 628 aa5.35□□□□□ -1.55
CCDC7-213ENST00000639290 H0YIN7 160 aa5.34□□□□□ -1.55
CCDC7-213ENST00000639290 POTEB2H3BUK9 544 aa5.34□□□□□ -1.55
CCDC7-213ENST00000639290 GPR37L1O60883 481 aa5.34□□□□□ -1.55
CCDC7-213ENST00000639290 HUNKP57058 714 aa5.34□□□□□ -1.55
CCDC7-213ENST00000639290 LINC00116Q8NCU8 138 aa5.34□□□□□ -1.55
CCDC7-213ENST00000639290 DPF3Q92784 378 aa5.34□□□□□ -1.55
CCDC7-213ENST00000639290 GDF15Q99988 308 aa5.34□□□□□ -1.55
CCDC7-213ENST00000639290 LTN1O94822 1766 aa5.34□□□□□ -1.55
CCDC7-213ENST00000639290 ALDH1A1P00352 501 aa5.34□□□□□ -1.56
CCDC7-213ENST00000639290 ARHGEF6Q15052 776 aa5.34□□□□□ -1.56
CCDC7-213ENST00000639290 TMEM31Q5JXX7 168 aa5.34□□□□□ -1.56
CCDC7-213ENST00000639290 UBE2Q1Q7Z7E8 422 aa5.34□□□□□ -1.56
CCDC7-213ENST00000639290 ERO1AQ96HE7 468 aa5.34□□□□□ -1.56
CCDC7-213ENST00000639290 LAMB1P07942 1786 aa5.34□□□□□ -1.56
CCDC7-213ENST00000639290 FAM205AQ6ZU69 1335 aa5.34□□□□□ -1.56
CCDC7-213ENST00000639290 CD163L1Q9NR16 1453 aa5.33□□□□□ -1.56
CCDC7-213ENST00000639290 POLRMTO00411 1230 aaKnown RBP5.33□□□□□ -1.56
CCDC7-213ENST00000639290 RFC4P35249 363 aa5.33□□□□□ -1.56
CCDC7-213ENST00000639290 ACAP1Q15027 740 aa5.33□□□□□ -1.56
CCDC7-213ENST00000639290 Q7L0L9 218 aa5.33□□□□□ -1.56
CCDC7-213ENST00000639290 CDC37L1Q7L3B6 337 aa5.33□□□□□ -1.56
CCDC7-213ENST00000639290 ITGB4P16144 1822 aa5.33□□□□□ -1.56
CCDC7-213ENST00000639290 ZNF541Q9H0D2 1346 aa5.33□□□□□ -1.56
CCDC7-213ENST00000639290 RPS6KA4O75676 772 aa5.33□□□□□ -1.56
CCDC7-213ENST00000639290 TM4SF1P30408 202 aa5.33□□□□□ -1.56
CCDC7-213ENST00000639290 TM4SF4P48230 202 aa5.33□□□□□ -1.56
CCDC7-213ENST00000639290 FKBP1BP68106 108 aa5.33□□□□□ -1.56
CCDC7-213ENST00000639290 ZIC5Q96T25 663 aa5.33□□□□□ -1.56
CCDC7-213ENST00000639290 ADARB2Q9NS39 739 aaKnown RBP5.33□□□□□ -1.56
CCDC7-213ENST00000639290 AFDNP55196 1824 aaKnown RBP5.33□□□□□ -1.56
CCDC7-213ENST00000639290 LAMB2P55268 1798 aa5.32□□□□□ -1.56
CCDC7-213ENST00000639290 NLRP6P59044 892 aa5.32□□□□□ -1.56
CCDC7-213ENST00000639290 TMEM132EQ6IEE7 984 aa5.32□□□□□ -1.56
CCDC7-213ENST00000639290 OTOP1Q7RTM1 612 aa5.32□□□□□ -1.56
CCDC7-213ENST00000639290 TDHQ8IZJ6 230 aa5.32□□□□□ -1.56
CCDC7-213ENST00000639290 C2orf69Q8N8R5 385 aa5.32□□□□□ -1.56
CCDC7-213ENST00000639290 ZCRB1Q8TBF4 217 aaKnown RBP5.32□□□□□ -1.56
CCDC7-213ENST00000639290 DDX54Q8TDD1 881 aaKnown RBP5.32□□□□□ -1.56
CCDC7-213ENST00000639290 NLRP2Q9NX02 1062 aa5.32□□□□□ -1.56
CCDC7-213ENST00000639290 LOC102724428A0A0B4J2F2 783 aa5.32□□□□□ -1.56
CCDC7-213ENST00000639290 TRAF5O00463 557 aa5.32□□□□□ -1.56
CCDC7-213ENST00000639290 SIK1P57059 783 aa5.32□□□□□ -1.56
CCDC7-213ENST00000639290 DDR1Q08345 913 aa5.32□□□□□ -1.56
CCDC7-213ENST00000639290 ZNF579Q8NAF0 562 aaKnown RBP5.32□□□□□ -1.56
CCDC7-213ENST00000639290 CNKSR1Q969H4 720 aa5.32□□□□□ -1.56
CCDC7-213ENST00000639290 KDRP35968 1356 aa5.31□□□□□ -1.56
CCDC7-213ENST00000639290 FKBP4Q02790 459 aaKnown RBP eCLIP5.31□□□□□ -1.56
CCDC7-213ENST00000639290 GRIPAP1Q4V328 841 aa5.31□□□□□ -1.56
CCDC7-213ENST00000639290 STYK1Q6J9G0 422 aa5.31□□□□□ -1.56
CCDC7-213ENST00000639290 C2CD5Q86YS7 1000 aa5.31□□□□□ -1.56
CCDC7-213ENST00000639290 ANKRD24Q8TF21 1146 aa5.31□□□□□ -1.56
CCDC7-213ENST00000639290 ARHGEF1Q92888 912 aaKnown RBP5.31□□□□□ -1.56
CCDC7-213ENST00000639290 RNF123Q5XPI4 1314 aa5.31□□□□□ -1.56
CCDC7-213ENST00000639290 USP42Q9H9J4 1324 aaKnown RBP5.31□□□□□ -1.56
CCDC7-213ENST00000639290 ZNF157P51786 506 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms