RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 PTPRUQ92729 1446 aa8.9□□□□□ -0.98
SCARB2-206ENST00000638175 METP08581 1390 aa8.9□□□□□ -0.98
SCARB2-206ENST00000638175 SNRPBP14678 240 aaKnown RBP8.9□□□□□ -0.98
SCARB2-206ENST00000638175 SH3BP2P78314 561 aa8.9□□□□□ -0.98
SCARB2-206ENST00000638175 GPKOWQ92917 476 aaPredicted RBP eCLIP8.9□□□□□ -0.98
SCARB2-206ENST00000638175 ADGRB2O60241 1585 aa8.9□□□□□ -0.99
SCARB2-206ENST00000638175 CDC42BPGQ6DT37 1551 aa8.9□□□□□ -0.99
SCARB2-206ENST00000638175 YTHDC2Q9H6S0 1430 aaKnown RBP8.89□□□□□ -0.99
SCARB2-206ENST00000638175 QRICH2Q9H0J4 1663 aa8.89□□□□□ -0.99
SCARB2-206ENST00000638175 EHBP1Q8NDI1 1231 aa8.89□□□□□ -0.99
SCARB2-206ENST00000638175 ARMC2Q8NEN0 867 aa8.89□□□□□ -0.99
SCARB2-206ENST00000638175 SIN3AQ96ST3 1273 aa8.89□□□□□ -0.99
SCARB2-206ENST00000638175 DCCP43146 1447 aa8.88□□□□□ -0.99
SCARB2-206ENST00000638175 ITSN1Q15811 1721 aa8.88□□□□□ -0.99
SCARB2-206ENST00000638175 FMN2Q9NZ56 1722 aa8.88□□□□□ -0.99
SCARB2-206ENST00000638175 LRPPRCP42704 1394 aaKnown RBP8.88□□□□□ -0.99
SCARB2-206ENST00000638175 CTHP32929 405 aa8.88□□□□□ -0.99
SCARB2-206ENST00000638175 SOX11P35716 441 aa8.88□□□□□ -0.99
SCARB2-206ENST00000638175 NEUROD1Q13562 356 aa8.88□□□□□ -0.99
SCARB2-206ENST00000638175 CCER1Q8TC90 406 aaPredicted RBP8.88□□□□□ -0.99
SCARB2-206ENST00000638175 ADAMTS19Q8TE59 1207 aa8.88□□□□□ -0.99
SCARB2-206ENST00000638175 GLMNQ92990 594 aa8.88□□□□□ -0.99
SCARB2-206ENST00000638175 L3MBTL2Q969R5 705 aa8.88□□□□□ -0.99
SCARB2-206ENST00000638175 UNC93B1Q9H1C4 597 aa8.88□□□□□ -0.99
SCARB2-206ENST00000638175 C14orf93Q9H972 538 aaKnown RBP8.88□□□□□ -0.99
SCARB2-206ENST00000638175 SERPINA10Q9UK55 444 aa8.88□□□□□ -0.99
SCARB2-206ENST00000638175 RALGAPBQ86X10 1494 aa8.88□□□□□ -0.99
SCARB2-206ENST00000638175 FAM135BQ49AJ0 1406 aa8.88□□□□□ -0.99
SCARB2-206ENST00000638175 TMEM94Q12767 1356 aa8.87□□□□□ -0.99
SCARB2-206ENST00000638175 ABCC11Q96J66 1382 aa8.87□□□□□ -0.99
SCARB2-206ENST00000638175 VAC14Q08AM6 782 aa8.87□□□□□ -0.99
SCARB2-206ENST00000638175 NR1H3Q13133 447 aa8.87□□□□□ -0.99
SCARB2-206ENST00000638175 LINC01559Q495D7 138 aa8.87□□□□□ -0.99
SCARB2-206ENST00000638175 BAP1Q92560 729 aa8.87□□□□□ -0.99
SCARB2-206ENST00000638175 ALG2Q9H553 416 aa8.87□□□□□ -0.99
SCARB2-206ENST00000638175 AMOTL2Q9Y2J4 779 aa8.87□□□□□ -0.99
SCARB2-206ENST00000638175 GPSM3Q9Y4H4 160 aa8.87□□□□□ -0.99
SCARB2-206ENST00000638175 ADGRL3Q9HAR2 1447 aa8.87□□□□□ -0.99
SCARB2-206ENST00000638175 MSH6P52701 1360 aa8.86□□□□□ -0.99
SCARB2-206ENST00000638175 RGPD8O14715 1765 aaPredicted RBP8.86□□□□□ -0.99
SCARB2-206ENST00000638175 ZBBXA8MT70 800 aa8.86□□□□□ -0.99
SCARB2-206ENST00000638175 NFX1Q12986 1120 aaKnown RBP8.86□□□□□ -0.99
SCARB2-206ENST00000638175 PDXDC2PQ6P474 469 aa8.86□□□□□ -0.99
SCARB2-206ENST00000638175 TRIM47Q96LD4 638 aa8.86□□□□□ -0.99
SCARB2-206ENST00000638175 ROBO1Q9Y6N7 1651 aa8.85□□□□□ -0.99
SCARB2-206ENST00000638175 WFS1O76024 890 aa8.85□□□□□ -0.99
SCARB2-206ENST00000638175 CFAP70Q5T0N1 1121 aa8.85□□□□□ -0.99
SCARB2-206ENST00000638175 NBPF14Q5TI25 921 aa8.85□□□□□ -0.99
SCARB2-206ENST00000638175 CCDC97Q96F63 343 aaPredicted RBP8.85□□□□□ -0.99
SCARB2-206ENST00000638175 ROBO2Q9HCK4 1378 aa8.85□□□□□ -0.99
SCARB2-206ENST00000638175 KIF1AQ12756 1690 aa8.85□□□□□ -0.99
SCARB2-206ENST00000638175 FBXO45P0C2W1 286 aa8.84□□□□□ -0.99
SCARB2-206ENST00000638175 CALR3Q96L12 384 aaKnown RBP8.84□□□□□ -0.99
SCARB2-206ENST00000638175 SENP2Q9HC62 589 aa8.84□□□□□ -0.99
SCARB2-206ENST00000638175 GPRASP1Q5JY77 1395 aa8.84□□□□□ -0.99
SCARB2-206ENST00000638175 NHSL1Q5SYE7 1610 aa8.83□□□□□ -1
SCARB2-206ENST00000638175 LCE2CQ5TA81 110 aa8.83□□□□□ -1
SCARB2-206ENST00000638175 SIRT1Q96EB6 747 aa8.83□□□□□ -1
SCARB2-206ENST00000638175 OCSTAMPQ9BR26 566 aa8.83□□□□□ -1
SCARB2-206ENST00000638175 WASF2Q9Y6W5 498 aa8.83□□□□□ -1
SCARB2-206ENST00000638175 TOPAZ1Q8N9V7 1692 aa8.83□□□□□ -1
SCARB2-206ENST00000638175 EIF4G2P78344 907 aaKnown RBP eCLIP8.82□□□□□ -1
SCARB2-206ENST00000638175 HDGFL1Q5TGJ6 251 aa8.82□□□□□ -1
SCARB2-206ENST00000638175 SH3BP5LQ7L8J4 393 aa8.82□□□□□ -1
SCARB2-206ENST00000638175 HOMEZQ8IX15 550 aa8.82□□□□□ -1
SCARB2-206ENST00000638175 ZNF511Q8NB15 262 aa8.82□□□□□ -1
SCARB2-206ENST00000638175 ARID3AQ99856 593 aa8.82□□□□□ -1
SCARB2-206ENST00000638175 TLL2Q9Y6L7 1015 aa8.82□□□□□ -1
SCARB2-206ENST00000638175 ROCK2O75116 1388 aaKnown RBP8.82□□□□□ -1
SCARB2-206ENST00000638175 EIF3AQ14152 1382 aaKnown RBP8.82□□□□□ -1
SCARB2-206ENST00000638175 PHLPP1O60346 1717 aa8.81□□□□□ -1
SCARB2-206ENST00000638175 TOM1O60784 492 aa8.81□□□□□ -1
SCARB2-206ENST00000638175 BMP1P13497 986 aa8.81□□□□□ -1
SCARB2-206ENST00000638175 TMEM132EQ6IEE7 984 aa8.81□□□□□ -1
SCARB2-206ENST00000638175 TRIM46Q7Z4K8 759 aa8.81□□□□□ -1
SCARB2-206ENST00000638175 FBXO41Q8TF61 875 aa8.81□□□□□ -1
SCARB2-206ENST00000638175 C19orf44Q9H6X5 657 aa8.81□□□□□ -1
SCARB2-206ENST00000638175 AHDC1Q5TGY3 1603 aaPredicted RBP8.8□□□□□ -1
SCARB2-206ENST00000638175 USP32Q8NFA0 1604 aa8.8□□□□□ -1
SCARB2-206ENST00000638175 CAPN5O15484 640 aaPredicted RBP8.8□□□□□ -1
SCARB2-206ENST00000638175 PTK2Q05397 1052 aa8.8□□□□□ -1
SCARB2-206ENST00000638175 SH3RF1Q7Z6J0 888 aa8.8□□□□□ -1
SCARB2-206ENST00000638175 TULP4Q9NRJ4 1543 aa8.8□□□□□ -1
SCARB2-206ENST00000638175 MST1RQ04912 1400 aa8.8□□□□□ -1
SCARB2-206ENST00000638175 UBAP1LF5GYI3 381 aa8.79□□□□□ -1
SCARB2-206ENST00000638175 TERTO14746 1132 aaKnown RBP8.79□□□□□ -1
SCARB2-206ENST00000638175 KIFC2Q96AC6 838 aa8.79□□□□□ -1
SCARB2-206ENST00000638175 UCN2Q96RP3 112 aa8.79□□□□□ -1
SCARB2-206ENST00000638175 STK26Q9P289 416 aa8.79□□□□□ -1
SCARB2-206ENST00000638175 ANKARQ7Z5J8 1434 aa8.79□□□□□ -1
SCARB2-206ENST00000638175 PLEKHH1Q9ULM0 1364 aa8.78□□□□□ -1
SCARB2-206ENST00000638175 SBNO2Q9Y2G9 1366 aa8.78□□□□□ -1
SCARB2-206ENST00000638175 ATF3P18847 181 aa8.78□□□□□ -1
SCARB2-206ENST00000638175 VARSP26640 1264 aaKnown RBP8.78□□□□□ -1
SCARB2-206ENST00000638175 SEMA3FQ13275 785 aa8.78□□□□□ -1
SCARB2-206ENST00000638175 NBPF8Q3BBV2 869 aa8.78□□□□□ -1
SCARB2-206ENST00000638175 ZNF592Q92610 1267 aa8.78□□□□□ -1
SCARB2-206ENST00000638175 PRAM1Q96QH2 718 aa8.78□□□□□ -1
SCARB2-206ENST00000638175 TRAK1Q9UPV9 953 aa8.78□□□□□ -1
SCARB2-206ENST00000638175 COL16A1Q07092 1604 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms