RNA–Protein interactions for RNA: ENST00000638041.1

MECP2-225, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-225ENST00000638041 HDGFL1Q5TGJ6 251 aa9.17□□□□□ -0.94
MECP2-225ENST00000638041 CCDC30Q5VVM6 783 aa9.17□□□□□ -0.94
MECP2-225ENST00000638041 DPY19L2Q6NUT2 758 aa9.17□□□□□ -0.94
MECP2-225ENST00000638041 C2CD5Q86YS7 1000 aa9.17□□□□□ -0.94
MECP2-225ENST00000638041 NLGN2Q8NFZ4 835 aa9.17□□□□□ -0.94
MECP2-225ENST00000638041 RPGRQ92834 1020 aaKnown RBP9.17□□□□□ -0.94
MECP2-225ENST00000638041 MYH16Q9H6N6 1097 aa9.17□□□□□ -0.94
MECP2-225ENST00000638041 GPBP1L1Q9HC44 474 aaPredicted RBP9.17□□□□□ -0.94
MECP2-225ENST00000638041 SIPA1L3O60292 1781 aaPredicted RBP9.17□□□□□ -0.94
MECP2-225ENST00000638041 C10orf71Q711Q0 1435 aa9.16□□□□□ -0.94
MECP2-225ENST00000638041 MAP3K15Q6ZN16 1313 aa9.16□□□□□ -0.94
MECP2-225ENST00000638041 ZC3H4Q9UPT8 1303 aaKnown RBP9.16□□□□□ -0.94
MECP2-225ENST00000638041 A0A0G2JLW4 131 aa9.16□□□□□ -0.94
MECP2-225ENST00000638041 APAF1O14727 1248 aa9.16□□□□□ -0.94
MECP2-225ENST00000638041 NEXNQ0ZGT2 675 aa9.16□□□□□ -0.94
MECP2-225ENST00000638041 CCDC27Q2M243 656 aa9.16□□□□□ -0.94
MECP2-225ENST00000638041 CC2D2BQ6DHV5 1058 aa9.16□□□□□ -0.94
MECP2-225ENST00000638041 MASTLQ96GX5 879 aa9.16□□□□□ -0.94
MECP2-225ENST00000638041 MIS18AQ9NYP9 233 aa9.16□□□□□ -0.94
MECP2-225ENST00000638041 CHL1O00533 1208 aa9.15□□□□□ -0.94
MECP2-225ENST00000638041 NPR1P16066 1061 aa9.15□□□□□ -0.94
MECP2-225ENST00000638041 DPEP1P16444 411 aa9.15□□□□□ -0.94
MECP2-225ENST00000638041 STYK1Q6J9G0 422 aa9.15□□□□□ -0.94
MECP2-225ENST00000638041 NLRP3Q96P20 1036 aa9.15□□□□□ -0.94
MECP2-225ENST00000638041 DDX21Q9NR30 783 aaKnown RBP eCLIP9.15□□□□□ -0.94
MECP2-225ENST00000638041 IL16Q14005 1332 aa9.14□□□□□ -0.95
MECP2-225ENST00000638041 DLG5Q8TDM6 1919 aa9.14□□□□□ -0.95
MECP2-225ENST00000638041 CAMTA2O94983 1202 aa9.14□□□□□ -0.95
MECP2-225ENST00000638041 TBC1D9BQ66K14 1250 aa9.14□□□□□ -0.95
MECP2-225ENST00000638041 GIGYF2Q6Y7W6 1299 aaKnown RBP9.14□□□□□ -0.95
MECP2-225ENST00000638041 RIC3Q7Z5B4 369 aa9.14□□□□□ -0.95
MECP2-225ENST00000638041 WDR63Q8IWG1 891 aa9.14□□□□□ -0.95
MECP2-225ENST00000638041 RTKN2Q8IZC4 609 aa9.14□□□□□ -0.95
MECP2-225ENST00000638041 RBM17Q96I25 401 aaKnown RBP9.14□□□□□ -0.95
MECP2-225ENST00000638041 LAMB4A4D0S4 1761 aa9.14□□□□□ -0.95
MECP2-225ENST00000638041 KCNQ3O43525 872 aa9.13□□□□□ -0.95
MECP2-225ENST00000638041 TMC4Q7Z404 712 aa9.13□□□□□ -0.95
MECP2-225ENST00000638041 UTP14AQ9BVJ6 771 aaKnown RBP9.13□□□□□ -0.95
MECP2-225ENST00000638041 MYH14Q7Z406 1995 aaKnown RBP9.13□□□□□ -0.95
MECP2-225ENST00000638041 IBTKQ9P2D0 1353 aaPredicted RBP9.12□□□□□ -0.95
MECP2-225ENST00000638041 LMNB1P20700 586 aa9.12□□□□□ -0.95
MECP2-225ENST00000638041 DDR1Q08345 913 aa9.12□□□□□ -0.95
MECP2-225ENST00000638041 AIMP1Q12904 312 aaKnown RBP9.12□□□□□ -0.95
MECP2-225ENST00000638041 CCDC93Q567U6 631 aa9.12□□□□□ -0.95
MECP2-225ENST00000638041 DUSP27Q5VZP5 1158 aa9.12□□□□□ -0.95
MECP2-225ENST00000638041 ANKRD13DQ6ZTN6 518 aa9.12□□□□□ -0.95
MECP2-225ENST00000638041 SMIM5Q71RC9 77 aa9.12□□□□□ -0.95
MECP2-225ENST00000638041 FAM9BQ8IZU0 186 aa9.12□□□□□ -0.95
MECP2-225ENST00000638041 ZNF784Q8NCA9 323 aaPredicted RBP9.12□□□□□ -0.95
MECP2-225ENST00000638041 SUPT20HQ8NEM7 779 aa9.12□□□□□ -0.95
MECP2-225ENST00000638041 THUMPD2Q9BTF0 503 aaKnown RBP9.12□□□□□ -0.95
MECP2-225ENST00000638041 PXDNLA1KZ92 1463 aa9.11□□□□□ -0.95
MECP2-225ENST00000638041 KIF13BQ9NQT8 1826 aa9.11□□□□□ -0.95
MECP2-225ENST00000638041 YBX3P16989 372 aaKnown RBP eCLIP9.11□□□□□ -0.95
MECP2-225ENST00000638041 PRR5LQ6MZQ0 368 aa9.11□□□□□ -0.95
MECP2-225ENST00000638041 DDX46Q7L014 1031 aaKnown RBP9.11□□□□□ -0.95
MECP2-225ENST00000638041 AMIGO3Q86WK7 504 aa9.11□□□□□ -0.95
MECP2-225ENST00000638041 PLBD2Q8NHP8 589 aa9.11□□□□□ -0.95
MECP2-225ENST00000638041 JDP2Q8WYK2 163 aa9.11□□□□□ -0.95
MECP2-225ENST00000638041 ZBTB3Q9H5J0 574 aa9.11□□□□□ -0.95
MECP2-225ENST00000638041 TRMT112Q9UI30 125 aaKnown RBP9.11□□□□□ -0.95
MECP2-225ENST00000638041 SRCAPQ6ZRS2 3230 aa9.11□□□□□ -0.95
MECP2-225ENST00000638041 KDM3BQ7LBC6 1761 aa9.11□□□□□ -0.95
MECP2-225ENST00000638041 SCN7AQ01118 1682 aa9.1□□□□□ -0.95
MECP2-225ENST00000638041 FAM177BA6PVY3 158 aa9.1□□□□□ -0.95
MECP2-225ENST00000638041 COPS6Q7L5N1 327 aa9.1□□□□□ -0.95
MECP2-225ENST00000638041 VPS33BQ9H267 617 aa9.1□□□□□ -0.95
MECP2-225ENST00000638041 TAOK3Q9H2K8 898 aa9.1□□□□□ -0.95
MECP2-225ENST00000638041 MBIPQ9NS73 344 aa9.1□□□□□ -0.95
MECP2-225ENST00000638041 RNF181Q9P0P0 153 aa9.1□□□□□ -0.95
MECP2-225ENST00000638041 TRIM35Q9UPQ4 493 aa9.1□□□□□ -0.95
MECP2-225ENST00000638041 HDAC5Q9UQL6 1122 aa9.1□□□□□ -0.95
MECP2-225ENST00000638041 ATP10DQ9P241 1426 aa9.1□□□□□ -0.95
MECP2-225ENST00000638041 SH3TC1Q8TE82 1336 aa9.09□□□□□ -0.95
MECP2-225ENST00000638041 IQCA1LA6NCM1 817 aa9.09□□□□□ -0.95
MECP2-225ENST00000638041 G3V3G9 751 aa9.09□□□□□ -0.95
MECP2-225ENST00000638041 CCER2I3L3R5 266 aa9.09□□□□□ -0.95
MECP2-225ENST00000638041 BBOX1O75936 387 aa9.09□□□□□ -0.95
MECP2-225ENST00000638041 SRGNP10124 158 aa9.09□□□□□ -0.95
MECP2-225ENST00000638041 CHRNA5P30532 468 aa9.09□□□□□ -0.95
MECP2-225ENST00000638041 TCIRG1Q13488 830 aa9.09□□□□□ -0.95
MECP2-225ENST00000638041 DCAF8Q5TAQ9 597 aa9.09□□□□□ -0.95
MECP2-225ENST00000638041 C9orf131Q5VYM1 1079 aa9.09□□□□□ -0.95
MECP2-225ENST00000638041 XAGE3Q8WTP9 111 aa9.09□□□□□ -0.95
MECP2-225ENST00000638041 ZNF428Q96B54 188 aa9.09□□□□□ -0.95
MECP2-225ENST00000638041 BCL2L12Q9HB09 334 aa9.09□□□□□ -0.95
MECP2-225ENST00000638041 NBPF26B4DH59 902 aa9.08□□□□□ -0.96
MECP2-225ENST00000638041 GPTP24298 496 aa9.08□□□□□ -0.96
MECP2-225ENST00000638041 TWISTNBQ3B726 338 aaPredicted RBP9.08□□□□□ -0.96
MECP2-225ENST00000638041 NBPF10Q6P3W6 841 aaKnown RBP9.08□□□□□ -0.96
MECP2-225ENST00000638041 WWC1Q8IX03 1113 aa9.08□□□□□ -0.96
MECP2-225ENST00000638041 NBPF15Q8N660 670 aa9.08□□□□□ -0.96
MECP2-225ENST00000638041 NECTIN2Q92692 538 aa9.08□□□□□ -0.96
MECP2-225ENST00000638041 CHPF2Q9P2E5 772 aa9.08□□□□□ -0.96
MECP2-225ENST00000638041 WWC3Q9ULE0 1092 aa9.08□□□□□ -0.96
MECP2-225ENST00000638041 ARFGEF1Q9Y6D6 1849 aa9.08□□□□□ -0.96
MECP2-225ENST00000638041 LTBP3Q9NS15 1303 aa9.07□□□□□ -0.96
MECP2-225ENST00000638041 BCORQ6W2J9 1755 aa9.07□□□□□ -0.96
MECP2-225ENST00000638041 PRAMEF22A3QJZ6 481 aa9.07□□□□□ -0.96
MECP2-225ENST00000638041 C21orf2O43822 256 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms