RNA–Protein interactions for RNA: ENST00000637832.1

CACNA1A-252, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-252ENST00000637832 BCAR3O75815 825 aa15.48■□□□□ 0.07
CACNA1A-252ENST00000637832 ANKRD13DQ6ZTN6 518 aa15.48■□□□□ 0.07
CACNA1A-252ENST00000637832 LRP10Q7Z4F1 713 aa15.48■□□□□ 0.07
CACNA1A-252ENST00000637832 RIC3Q7Z5B4 369 aa15.48■□□□□ 0.07
CACNA1A-252ENST00000637832 PLBD2Q8NHP8 589 aa15.48■□□□□ 0.07
CACNA1A-252ENST00000637832 ARHGEF1Q92888 912 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-252ENST00000637832 API5Q9BZZ5 524 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-252ENST00000637832 NARFQ9UHQ1 456 aa15.48■□□□□ 0.07
CACNA1A-252ENST00000637832 TBC1D2BQ9UPU7 963 aa15.48■□□□□ 0.07
CACNA1A-252ENST00000637832 USP42Q9H9J4 1324 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-252ENST00000637832 ERVV-1B6SEH8 477 aa15.47■□□□□ 0.07
CACNA1A-252ENST00000637832 HSP90AB3PQ58FF7 597 aa15.47■□□□□ 0.07
CACNA1A-252ENST00000637832 ZKSCAN2Q63HK3 967 aa15.47■□□□□ 0.07
CACNA1A-252ENST00000637832 G2E3Q7L622 706 aa15.47■□□□□ 0.07
CACNA1A-252ENST00000637832 ARHGAP45Q92619 1136 aa15.47■□□□□ 0.07
CACNA1A-252ENST00000637832 ZBTB3Q9H5J0 574 aa15.47■□□□□ 0.07
CACNA1A-252ENST00000637832 NOB1Q9ULX3 412 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-252ENST00000637832 ANKRD36CQ5JPF3 1778 aa15.47■□□□□ 0.07
CACNA1A-252ENST00000637832 MS4A1P11836 297 aa15.46■□□□□ 0.07
CACNA1A-252ENST00000637832 NEXNQ0ZGT2 675 aa15.46■□□□□ 0.07
CACNA1A-252ENST00000637832 KSR2Q6VAB6 950 aa15.46■□□□□ 0.07
CACNA1A-252ENST00000637832 TTLL7Q6ZT98 887 aa15.46■□□□□ 0.07
CACNA1A-252ENST00000637832 NUP98P52948 1817 aa15.45■□□□□ 0.06
CACNA1A-252ENST00000637832 R3HDM1Q15032 1099 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-252ENST00000637832 CLEC4GQ6UXB4 293 aa15.45■□□□□ 0.06
CACNA1A-252ENST00000637832 AMIGO3Q86WK7 504 aa15.45■□□□□ 0.06
CACNA1A-252ENST00000637832 COL23A1Q86Y22 540 aaPredicted RBP15.45■□□□□ 0.06
CACNA1A-252ENST00000637832 FTSJ3Q8IY81 847 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-252ENST00000637832 PXDNLA1KZ92 1463 aa15.45■□□□□ 0.06
CACNA1A-252ENST00000637832 PI4KAP2A4QPH2 592 aa15.44■□□□□ 0.06
CACNA1A-252ENST00000637832 CAMTA2O94983 1202 aa15.44■□□□□ 0.06
CACNA1A-252ENST00000637832 USPL1Q5W0Q7 1092 aa15.44■□□□□ 0.06
CACNA1A-252ENST00000637832 ATF7IPQ6VMQ6 1270 aa15.44■□□□□ 0.06
CACNA1A-252ENST00000637832 GIGYF2Q6Y7W6 1299 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-252ENST00000637832 PI4KAP1Q8N8J0 262 aa15.44■□□□□ 0.06
CACNA1A-252ENST00000637832 SLC16A10Q8TF71 515 aa15.44■□□□□ 0.06
CACNA1A-252ENST00000637832 DNAAF4Q8WXU2 420 aa15.44■□□□□ 0.06
CACNA1A-252ENST00000637832 MAP3K2Q9Y2U5 619 aa15.44■□□□□ 0.06
CACNA1A-252ENST00000637832 SMIM5Q71RC9 77 aa15.43■□□□□ 0.06
CACNA1A-252ENST00000637832 SRP68Q9UHB9 627 aaKnown RBP15.43■□□□□ 0.06
CACNA1A-252ENST00000637832 ADCY9O60503 1353 aa15.43■□□□□ 0.06
CACNA1A-252ENST00000637832 N4BP2Q86UW6 1770 aaPredicted RBP15.43■□□□□ 0.06
CACNA1A-252ENST00000637832 CASZ1Q86V15 1759 aa15.43■□□□□ 0.06
CACNA1A-252ENST00000637832 AFDNP55196 1824 aaKnown RBP15.43■□□□□ 0.06
CACNA1A-252ENST00000637832 ATP10DQ9P241 1426 aa15.43■□□□□ 0.06
CACNA1A-252ENST00000637832 SLC4A10Q6U841 1118 aa15.42■□□□□ 0.06
CACNA1A-252ENST00000637832 NLGN1Q8N2Q7 840 aa15.42■□□□□ 0.06
CACNA1A-252ENST00000637832 METTL22Q9BUU2 404 aaPredicted RBP15.42■□□□□ 0.06
CACNA1A-252ENST00000637832 GYS1P13807 737 aa15.41■□□□□ 0.06
CACNA1A-252ENST00000637832 TRIM27P14373 513 aa15.41■□□□□ 0.06
CACNA1A-252ENST00000637832 RRP1P56182 461 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-252ENST00000637832 PSDA5PKW4 1024 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-252ENST00000637832 F6X3S4 739 aa15.4■□□□□ 0.06
CACNA1A-252ENST00000637832 CCT4P50991 539 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-252ENST00000637832 TCIRG1Q13488 830 aa15.4■□□□□ 0.06
CACNA1A-252ENST00000637832 HLFQ16534 295 aa15.4■□□□□ 0.06
CACNA1A-252ENST00000637832 DZIP1LQ8IYY4 767 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-252ENST00000637832 SETDB2Q96T68 719 aa15.4■□□□□ 0.06
CACNA1A-252ENST00000637832 MYD88Q99836 296 aa15.4■□□□□ 0.06
CACNA1A-252ENST00000637832 NIP7Q9Y221 180 aaKnown RBP eCLIP15.4■□□□□ 0.06
CACNA1A-252ENST00000637832 CARMIL3Q8ND23 1372 aa15.39■□□□□ 0.05
CACNA1A-252ENST00000637832 PARP10Q53GL7 1025 aa15.39■□□□□ 0.05
CACNA1A-252ENST00000637832 LINS1Q8NG48 757 aa15.39■□□□□ 0.05
CACNA1A-252ENST00000637832 CLUAP1Q96AJ1 413 aa15.39■□□□□ 0.05
CACNA1A-252ENST00000637832 SRCIN1Q9C0H9 1055 aa15.39■□□□□ 0.05
CACNA1A-252ENST00000637832 ABCC4O15439 1325 aa15.39■□□□□ 0.05
CACNA1A-252ENST00000637832 COL24A1Q17RW2 1714 aa15.38■□□□□ 0.05
CACNA1A-252ENST00000637832 NPHP1O15259 732 aa15.38■□□□□ 0.05
CACNA1A-252ENST00000637832 GPTP24298 496 aa15.38■□□□□ 0.05
CACNA1A-252ENST00000637832 FKBP8Q14318 412 aa15.38■□□□□ 0.05
CACNA1A-252ENST00000637832 BICDL1Q6ZP65 573 aa15.38■□□□□ 0.05
CACNA1A-252ENST00000637832 MTFR1LQ9H019 292 aa15.38■□□□□ 0.05
CACNA1A-252ENST00000637832 BCL2L12Q9HB09 334 aa15.38■□□□□ 0.05
CACNA1A-252ENST00000637832 SUPT16HQ9Y5B9 1047 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-252ENST00000637832 PLIN1O60240 522 aa15.37■□□□□ 0.05
CACNA1A-252ENST00000637832 ALDH1L1O75891 902 aa15.37■□□□□ 0.05
CACNA1A-252ENST00000637832 PDE3AQ14432 1141 aa15.37■□□□□ 0.05
CACNA1A-252ENST00000637832 TBC1D9BQ66K14 1250 aa15.37■□□□□ 0.05
CACNA1A-252ENST00000637832 PPP1R42Q7Z4L9 355 aa15.37■□□□□ 0.05
CACNA1A-252ENST00000637832 CCDC191Q8NCU4 936 aa15.37■□□□□ 0.05
CACNA1A-252ENST00000637832 NYXQ9GZU5 481 aa15.37■□□□□ 0.05
CACNA1A-252ENST00000637832 CWC25Q9NXE8 425 aaPredicted RBP15.37■□□□□ 0.05
CACNA1A-252ENST00000637832 ATP5J2-PTCD1G3V325 749 aa15.36■□□□□ 0.05
CACNA1A-252ENST00000637832 POLD1P28340 1107 aa15.36■□□□□ 0.05
CACNA1A-252ENST00000637832 TRIM28Q13263 835 aaKnown RBP15.36■□□□□ 0.05
CACNA1A-252ENST00000637832 BEND3Q5T5X7 828 aa15.36■□□□□ 0.05
CACNA1A-252ENST00000637832 MSL1Q68DK7 614 aa15.36■□□□□ 0.05
CACNA1A-252ENST00000637832 ZNF34Q8IZ26 560 aa15.36■□□□□ 0.05
CACNA1A-252ENST00000637832 ISCA1Q9BUE6 129 aa15.36■□□□□ 0.05
CACNA1A-252ENST00000637832 CHMP4BQ9H444 224 aaKnown RBP15.36■□□□□ 0.05
CACNA1A-252ENST00000637832 PARP3Q9Y6F1 533 aa15.36■□□□□ 0.05
CACNA1A-252ENST00000637832 RNF123Q5XPI4 1314 aa15.36■□□□□ 0.05
CACNA1A-252ENST00000637832 IBTKQ9P2D0 1353 aaPredicted RBP15.36■□□□□ 0.05
CACNA1A-252ENST00000637832 NEURL1BA8MQ27 555 aa15.35■□□□□ 0.05
CACNA1A-252ENST00000637832 ZBTB7AO95365 584 aa15.35■□□□□ 0.05
CACNA1A-252ENST00000637832 HSP90B1P14625 803 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-252ENST00000637832 GTF2E1P29083 439 aaPredicted RBP15.35■□□□□ 0.05
CACNA1A-252ENST00000637832 NFIXQ14938 502 aa15.35■□□□□ 0.05
CACNA1A-252ENST00000637832 INTS3Q68E01 1043 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-252ENST00000637832 NLRP10Q86W26 655 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms