RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 ST5P78524 1137 aa16.24■□□□□ 0.19
CACNA1A-250ENST00000637809 U2AF1Q01081 240 aaKnown RBP eCLIP16.24■□□□□ 0.19
CACNA1A-250ENST00000637809 CLEC4GQ6UXB4 293 aa16.24■□□□□ 0.19
CACNA1A-250ENST00000637809 NPM2Q86SE8 214 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-250ENST00000637809 C7orf43Q8WVR3 580 aa16.24■□□□□ 0.19
CACNA1A-250ENST00000637809 CNKSR1Q969H4 720 aa16.24■□□□□ 0.19
CACNA1A-250ENST00000637809 TAOK3Q9H2K8 898 aa16.24■□□□□ 0.19
CACNA1A-250ENST00000637809 NUDCQ9Y266 331 aa16.24■□□□□ 0.19
CACNA1A-250ENST00000637809 TIAM2Q8IVF5 1701 aa16.23■□□□□ 0.19
CACNA1A-250ENST00000637809 NBPF26B4DH59 902 aa16.23■□□□□ 0.19
CACNA1A-250ENST00000637809 DCTN1Q14203 1278 aa16.23■□□□□ 0.19
CACNA1A-250ENST00000637809 COL13A1Q5TAT6 717 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-250ENST00000637809 DPY19L2Q6NUT2 758 aa16.23■□□□□ 0.19
CACNA1A-250ENST00000637809 NBPF10Q6P3W6 841 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-250ENST00000637809 NBPF15Q8N660 670 aa16.23■□□□□ 0.19
CACNA1A-250ENST00000637809 MASTLQ96GX5 879 aa16.23■□□□□ 0.19
CACNA1A-250ENST00000637809 KLRG2A4D1S0 409 aaPredicted RBP16.22■□□□□ 0.19
CACNA1A-250ENST00000637809 RTF1Q92541 710 aaKnown RBP16.22■□□□□ 0.19
CACNA1A-250ENST00000637809 RGL2O15211 777 aa16.21■□□□□ 0.19
CACNA1A-250ENST00000637809 NPHP1O15259 732 aa16.21■□□□□ 0.19
CACNA1A-250ENST00000637809 HTATSF1O43719 755 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-250ENST00000637809 NBPF5PQ86XG9 351 aaPredicted RBP16.21■□□□□ 0.19
CACNA1A-250ENST00000637809 DDNO94850 711 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-250ENST00000637809 SOGA3Q5TF21 947 aa16.2■□□□□ 0.18
CACNA1A-250ENST00000637809 ZNF652Q9Y2D9 606 aa16.2■□□□□ 0.18
CACNA1A-250ENST00000637809 BCORQ6W2J9 1755 aa16.2■□□□□ 0.18
CACNA1A-250ENST00000637809 FER1L6Q2WGJ9 1857 aa16.19■□□□□ 0.18
CACNA1A-250ENST00000637809 POTEIP0CG38 1075 aa16.19■□□□□ 0.18
CACNA1A-250ENST00000637809 POTEJP0CG39 1038 aa16.19■□□□□ 0.18
CACNA1A-250ENST00000637809 SLX4Q8IY92 1834 aa16.18■□□□□ 0.18
CACNA1A-250ENST00000637809 NPR1P16066 1061 aa16.18■□□□□ 0.18
CACNA1A-250ENST00000637809 TAF7Q15545 349 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-250ENST00000637809 HLFQ16534 295 aa16.18■□□□□ 0.18
CACNA1A-250ENST00000637809 NIP7Q9Y221 180 aaKnown RBP eCLIP16.18■□□□□ 0.18
CACNA1A-250ENST00000637809 CCDC93Q567U6 631 aa16.17■□□□□ 0.18
CACNA1A-250ENST00000637809 CHADLQ6NUI6 762 aa16.17■□□□□ 0.18
CACNA1A-250ENST00000637809 TPTE2Q6XPS3 522 aa16.17■□□□□ 0.18
CACNA1A-250ENST00000637809 MIS18AQ9NYP9 233 aa16.17■□□□□ 0.18
CACNA1A-250ENST00000637809 HSPA1AP0DMV8 641 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-250ENST00000637809 HSPA1BP0DMV9 641 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-250ENST00000637809 OLFM4Q6UX06 510 aa16.16■□□□□ 0.18
CACNA1A-250ENST00000637809 L3MBTL3Q96JM7 780 aaPredicted RBP16.16■□□□□ 0.18
CACNA1A-250ENST00000637809 FKBP4Q02790 459 aaKnown RBP eCLIP16.15■□□□□ 0.18
CACNA1A-250ENST00000637809 FAM177BA6PVY3 158 aa16.14■□□□□ 0.17
CACNA1A-250ENST00000637809 TAF1DQ9H5J8 278 aaPredicted RBP16.14■□□□□ 0.17
CACNA1A-250ENST00000637809 ZNF277Q9NRM2 450 aaPredicted RBP16.14■□□□□ 0.17
CACNA1A-250ENST00000637809 CREBZFQ9NS37 354 aa16.14■□□□□ 0.17
CACNA1A-250ENST00000637809 ZNF541Q9H0D2 1346 aa16.14■□□□□ 0.17
CACNA1A-250ENST00000637809 CCDC88AQ3V6T2 1871 aa16.14■□□□□ 0.17
CACNA1A-250ENST00000637809 SNED1Q8TER0 1413 aa16.13■□□□□ 0.17
CACNA1A-250ENST00000637809 IQCA1LA6NCM1 817 aa16.13■□□□□ 0.17
CACNA1A-250ENST00000637809 CRY2Q49AN0 593 aa16.13■□□□□ 0.17
CACNA1A-250ENST00000637809 PLEKHF1Q96S99 279 aa16.13■□□□□ 0.17
CACNA1A-250ENST00000637809 DICER1Q9UPY3 1922 aaKnown RBP16.13■□□□□ 0.17
CACNA1A-250ENST00000637809 PASKQ96RG2 1323 aa16.13■□□□□ 0.17
CACNA1A-250ENST00000637809 ARFGEF2Q9Y6D5 1785 aa16.13■□□□□ 0.17
CACNA1A-250ENST00000637809 ABCC12Q96J65 1359 aa16.13■□□□□ 0.17
CACNA1A-250ENST00000637809 ERVV-1B6SEH8 477 aa16.12■□□□□ 0.17
CACNA1A-250ENST00000637809 LDHDQ86WU2 507 aa16.12■□□□□ 0.17
CACNA1A-250ENST00000637809 RTKN2Q8IZC4 609 aa16.12■□□□□ 0.17
CACNA1A-250ENST00000637809 TNS4Q8IZW8 715 aa16.12■□□□□ 0.17
CACNA1A-250ENST00000637809 EIF4A1P60842 406 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-250ENST00000637809 PNISRQ8TF01 805 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-250ENST00000637809 FZD9O00144 591 aa16.1■□□□□ 0.17
CACNA1A-250ENST00000637809 ALDH1B1P30837 517 aa16.1■□□□□ 0.17
CACNA1A-250ENST00000637809 TTLL7Q6ZT98 887 aa16.1■□□□□ 0.17
CACNA1A-250ENST00000637809 NUTM1Q86Y26 1132 aa16.1■□□□□ 0.17
CACNA1A-250ENST00000637809 NGEFQ8N5V2 710 aa16.1■□□□□ 0.17
CACNA1A-250ENST00000637809 THUMPD2Q9BTF0 503 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-250ENST00000637809 MKRN1Q9UHC7 482 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-250ENST00000637809 MAP3K15Q6ZN16 1313 aa16.1■□□□□ 0.17
CACNA1A-250ENST00000637809 ITGBL1O95965 494 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-250ENST00000637809 IARSP41252 1262 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-250ENST00000637809 NFE2L2Q16236 605 aa16.09■□□□□ 0.17
CACNA1A-250ENST00000637809 SYNE4Q8N205 404 aa16.09■□□□□ 0.17
CACNA1A-250ENST00000637809 NYXQ9GZU5 481 aa16.09■□□□□ 0.17
CACNA1A-250ENST00000637809 UBN2Q6ZU65 1347 aa16.09■□□□□ 0.17
CACNA1A-250ENST00000637809 CNTNAP1P78357 1384 aa16.09■□□□□ 0.17
CACNA1A-250ENST00000637809 GTF2E1P29083 439 aaPredicted RBP16.08■□□□□ 0.16
CACNA1A-250ENST00000637809 PSMD1Q99460 953 aa16.08■□□□□ 0.16
CACNA1A-250ENST00000637809 HACL1Q9UJ83 578 aa16.08■□□□□ 0.16
CACNA1A-250ENST00000637809 RRP7AQ9Y3A4 280 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-250ENST00000637809 HOXA10P31260 410 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-250ENST00000637809 SLC51AQ86UW1 340 aa16.07■□□□□ 0.16
CACNA1A-250ENST00000637809 IBTKQ9P2D0 1353 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-250ENST00000637809 RIC1Q4ADV7 1423 aa16.07■□□□□ 0.16
CACNA1A-250ENST00000637809 CACNA1SQ13698 1873 aa16.06■□□□□ 0.16
CACNA1A-250ENST00000637809 LAMB4A4D0S4 1761 aa16.06■□□□□ 0.16
CACNA1A-250ENST00000637809 CAPN15O75808 1086 aa16.06■□□□□ 0.16
CACNA1A-250ENST00000637809 NEFMP07197 916 aa16.06■□□□□ 0.16
CACNA1A-250ENST00000637809 MYL6BP14649 208 aa16.06■□□□□ 0.16
CACNA1A-250ENST00000637809 GPTP24298 496 aa16.06■□□□□ 0.16
CACNA1A-250ENST00000637809 EPHX2P34913 555 aa16.06■□□□□ 0.16
CACNA1A-250ENST00000637809 SUSD4Q5VX71 490 aa16.06■□□□□ 0.16
CACNA1A-250ENST00000637809 KIF6Q6ZMV9 814 aa16.06■□□□□ 0.16
CACNA1A-250ENST00000637809 LRP10Q7Z4F1 713 aa16.06■□□□□ 0.16
CACNA1A-250ENST00000637809 ZNF34Q8IZ26 560 aa16.06■□□□□ 0.16
CACNA1A-250ENST00000637809 ZBTB3Q9H5J0 574 aa16.06■□□□□ 0.16
CACNA1A-250ENST00000637809 COL4A5P29400 1685 aa16.05■□□□□ 0.16
CACNA1A-250ENST00000637809 RNF123Q5XPI4 1314 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms