RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 TOP1P11387 765 aaKnown RBP18.53■□□□□ 0.56
CLN5-218ENST00000637397 TMC6Q7Z403 805 aa18.53■□□□□ 0.56
CLN5-218ENST00000637397 KCNH5Q8NCM2 988 aa18.53■□□□□ 0.56
CLN5-218ENST00000637397 ZNHIT6Q9NWK9 470 aaKnown RBP18.53■□□□□ 0.56
CLN5-218ENST00000637397 AMOTL2Q9Y2J4 779 aa18.53■□□□□ 0.56
CLN5-218ENST00000637397 ARHGAP29Q52LW3 1261 aa18.52■□□□□ 0.56
CLN5-218ENST00000637397 BRF1Q92994 677 aa18.52■□□□□ 0.56
CLN5-218ENST00000637397 DISP1Q96F81 1524 aa18.52■□□□□ 0.56
CLN5-218ENST00000637397 HYPKQ9NX55 129 aa18.52■□□□□ 0.56
CLN5-218ENST00000637397 CEP135Q66GS9 1140 aa18.52■□□□□ 0.56
CLN5-218ENST00000637397 STRN4Q9NRL3 753 aa18.52■□□□□ 0.56
CLN5-218ENST00000637397 FOXO3O43524 673 aa18.52■□□□□ 0.55
CLN5-218ENST00000637397 EIF3JO75822 258 aaKnown RBP18.52■□□□□ 0.55
CLN5-218ENST00000637397 SLC3A2P08195 630 aaKnown RBP18.52■□□□□ 0.55
CLN5-218ENST00000637397 TRMT2AQ8IZ69 625 aaKnown RBP18.52■□□□□ 0.55
CLN5-218ENST00000637397 LRRC2Q9BYS8 371 aa18.52■□□□□ 0.55
CLN5-218ENST00000637397 CHPF2Q9P2E5 772 aa18.51■□□□□ 0.55
CLN5-218ENST00000637397 SAMD9Q5K651 1589 aa18.51■□□□□ 0.55
CLN5-218ENST00000637397 ZSCAN12O43309 604 aa18.51■□□□□ 0.55
CLN5-218ENST00000637397 POLR3DP05423 398 aaPredicted RBP18.51■□□□□ 0.55
CLN5-218ENST00000637397 TDO2P48775 406 aa18.51■□□□□ 0.55
CLN5-218ENST00000637397 MAPK8IP2Q13387 824 aaPredicted RBP18.51■□□□□ 0.55
CLN5-218ENST00000637397 ISM2Q6H9L7 571 aa18.51■□□□□ 0.55
CLN5-218ENST00000637397 A0A087WZG4 1122 aa18.51■□□□□ 0.55
CLN5-218ENST00000637397 AMOTQ4VCS5 1084 aa18.51■□□□□ 0.55
CLN5-218ENST00000637397 GSDMDP57764 484 aa18.51■□□□□ 0.55
CLN5-218ENST00000637397 KLHL10Q6JEL2 608 aa18.5■□□□□ 0.55
CLN5-218ENST00000637397 DNAJC25Q9H1X3 360 aa18.5■□□□□ 0.55
CLN5-218ENST00000637397 GOLIM4O00461 696 aa18.5■□□□□ 0.55
CLN5-218ENST00000637397 EPB41L2O43491 1005 aaKnown RBP18.5■□□□□ 0.55
CLN5-218ENST00000637397 CAVIN2O95810 425 aa18.5■□□□□ 0.55
CLN5-218ENST00000637397 ZNF445P59923 1031 aa18.5■□□□□ 0.55
CLN5-218ENST00000637397 MTHFSDQ2M296 383 aaKnown RBP18.5■□□□□ 0.55
CLN5-218ENST00000637397 CCDC82Q8N4S0 544 aa18.5■□□□□ 0.55
CLN5-218ENST00000637397 JARID2Q92833 1246 aaPredicted RBP18.5■□□□□ 0.55
CLN5-218ENST00000637397 CCDC102AQ96A19 550 aa18.5■□□□□ 0.55
CLN5-218ENST00000637397 POLR3GO15318 223 aaPredicted RBP18.5■□□□□ 0.55
CLN5-218ENST00000637397 PTCD1O75127 700 aaKnown RBP18.5■□□□□ 0.55
CLN5-218ENST00000637397 SYT1P21579 422 aa18.5■□□□□ 0.55
CLN5-218ENST00000637397 TOM1L2Q6ZVM7 507 aa18.5■□□□□ 0.55
CLN5-218ENST00000637397 UBAC1Q9BSL1 405 aa18.5■□□□□ 0.55
CLN5-218ENST00000637397 PAXBP1Q9Y5B6 917 aa18.5■□□□□ 0.55
CLN5-218ENST00000637397 ZNF521Q96K83 1311 aa18.49■□□□□ 0.55
CLN5-218ENST00000637397 SNW1Q13573 536 aaKnown RBP18.49■□□□□ 0.55
CLN5-218ENST00000637397 HMG20BQ9P0W2 317 aa18.49■□□□□ 0.55
CLN5-218ENST00000637397 MAGI2Q86UL8 1455 aa18.49■□□□□ 0.55
CLN5-218ENST00000637397 GOLGA8BA8MQT2 603 aa18.49■□□□□ 0.55
CLN5-218ENST00000637397 CPA1P15085 419 aa18.49■□□□□ 0.55
CLN5-218ENST00000637397 EPS15P42566 896 aa18.49■□□□□ 0.55
CLN5-218ENST00000637397 LMBRD1Q9NUN5 540 aa18.49■□□□□ 0.55
CLN5-218ENST00000637397 AIDAQ96BJ3 306 aa18.49■□□□□ 0.55
CLN5-218ENST00000637397 SKILP12757 684 aa18.49■□□□□ 0.55
CLN5-218ENST00000637397 G2E3Q7L622 706 aa18.49■□□□□ 0.55
CLN5-218ENST00000637397 MPHOSPH8Q99549 860 aa18.49■□□□□ 0.55
CLN5-218ENST00000637397 MSH6P52701 1360 aa18.49■□□□□ 0.55
CLN5-218ENST00000637397 TYRO3Q06418 890 aa18.48■□□□□ 0.55
CLN5-218ENST00000637397 TMX1Q9H3N1 280 aa18.48■□□□□ 0.55
CLN5-218ENST00000637397 PPIP5K1Q6PFW1 1433 aa18.48■□□□□ 0.55
CLN5-218ENST00000637397 RBM33Q96EV2 1170 aaKnown RBP18.48■□□□□ 0.55
CLN5-218ENST00000637397 UBE3BQ7Z3V4 1068 aa18.48■□□□□ 0.55
CLN5-218ENST00000637397 RAB11FIP4Q86YS3 637 aa18.48■□□□□ 0.55
CLN5-218ENST00000637397 ZSCAN16Q9H4T2 348 aaPredicted RBP18.48■□□□□ 0.55
CLN5-218ENST00000637397 PA2G4Q9UQ80 394 aaKnown RBP18.48■□□□□ 0.55
CLN5-218ENST00000637397 DDX46Q7L014 1031 aaKnown RBP18.48■□□□□ 0.55
CLN5-218ENST00000637397 HAND2P61296 217 aa18.47■□□□□ 0.55
CLN5-218ENST00000637397 GAS2L3Q86XJ1 694 aa18.47■□□□□ 0.55
CLN5-218ENST00000637397 ATP5J2-PTCD1G3V325 749 aa18.47■□□□□ 0.55
CLN5-218ENST00000637397 PTGS1P23219 599 aa18.47■□□□□ 0.55
CLN5-218ENST00000637397 METTL24Q5JXM2 366 aa18.47■□□□□ 0.55
CLN5-218ENST00000637397 TRERF1Q96PN7 1200 aa18.47■□□□□ 0.55
CLN5-218ENST00000637397 TAF3Q5VWG9 929 aa18.47■□□□□ 0.55
CLN5-218ENST00000637397 KDM5CP41229 1560 aa18.47■□□□□ 0.55
CLN5-218ENST00000637397 CDR1P51861 262 aa18.47■□□□□ 0.55
CLN5-218ENST00000637397 STIM1Q13586 685 aa18.47■□□□□ 0.55
CLN5-218ENST00000637397 PIBF1Q8WXW3 757 aa18.47■□□□□ 0.55
CLN5-218ENST00000637397 WASF1Q92558 559 aa18.47■□□□□ 0.55
CLN5-218ENST00000637397 USP16Q9Y5T5 823 aa18.47■□□□□ 0.55
CLN5-218ENST00000637397 ZNF213O14771 459 aa18.46■□□□□ 0.55
CLN5-218ENST00000637397 CNNM3Q8NE01 707 aa18.46■□□□□ 0.55
CLN5-218ENST00000637397 SNRKQ9NRH2 765 aa18.46■□□□□ 0.55
CLN5-218ENST00000637397 ORC3Q9UBD5 711 aaPredicted RBP18.46■□□□□ 0.55
CLN5-218ENST00000637397 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
CLN5-218ENST00000637397 PHF8Q9UPP1 1060 aa18.46■□□□□ 0.55
CLN5-218ENST00000637397 PTPRTO14522 1441 aa18.46■□□□□ 0.55
CLN5-218ENST00000637397 FAM193AP78312 1265 aa18.46■□□□□ 0.55
CLN5-218ENST00000637397 DEF6Q9H4E7 631 aa18.46■□□□□ 0.55
CLN5-218ENST00000637397 NCKAP5LQ9HCH0 1330 aa18.46■□□□□ 0.54
CLN5-218ENST00000637397 CPLX3Q8WVH0 158 aa18.45■□□□□ 0.54
CLN5-218ENST00000637397 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.45■□□□□ 0.54
CLN5-218ENST00000637397 V9GYY5 206 aaPredicted RBP18.45■□□□□ 0.54
CLN5-218ENST00000637397 CASQ1P31415 396 aa18.45■□□□□ 0.54
CLN5-218ENST00000637397 KIF4BQ2VIQ3 1234 aa18.45■□□□□ 0.54
CLN5-218ENST00000637397 CDK5RAP3Q96JB5 506 aa18.45■□□□□ 0.54
CLN5-218ENST00000637397 TMEM63CQ9P1W3 806 aa18.45■□□□□ 0.54
CLN5-218ENST00000637397 AKAP2Q9Y2D5 859 aa18.45■□□□□ 0.54
CLN5-218ENST00000637397 LUZP1Q86V48 1076 aa18.45■□□□□ 0.54
CLN5-218ENST00000637397 SOS1Q07889 1333 aaPredicted RBP18.44■□□□□ 0.54
CLN5-218ENST00000637397 DTNBO60941 627 aa18.44■□□□□ 0.54
CLN5-218ENST00000637397 DENND4BO75064 1496 aaPredicted RBP18.44■□□□□ 0.54
CLN5-218ENST00000637397 TSPYL1Q9H0U9 437 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms