RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 COPS6Q7L5N1 327 aa11.81□□□□□ -0.52
CACNA1A-239ENST00000637297 CDCA7LQ96GN5 454 aa11.81□□□□□ -0.52
CACNA1A-239ENST00000637297 NUP98P52948 1817 aa11.81□□□□□ -0.52
CACNA1A-239ENST00000637297 COL24A1Q17RW2 1714 aa11.8□□□□□ -0.52
CACNA1A-239ENST00000637297 CAMTA2O94983 1202 aa11.8□□□□□ -0.52
CACNA1A-239ENST00000637297 PDIA6Q15084 440 aa11.8□□□□□ -0.52
CACNA1A-239ENST00000637297 PROSER3Q2NL68 480 aa11.8□□□□□ -0.52
CACNA1A-239ENST00000637297 CLEC4GQ6UXB4 293 aa11.8□□□□□ -0.52
CACNA1A-239ENST00000637297 XAGE3Q8WTP9 111 aa11.8□□□□□ -0.52
CACNA1A-239ENST00000637297 SETDB2Q96T68 719 aa11.8□□□□□ -0.52
CACNA1A-239ENST00000637297 SGIP1Q9BQI5 828 aa11.8□□□□□ -0.52
CACNA1A-239ENST00000637297 ZBTB3Q9H5J0 574 aa11.8□□□□□ -0.52
CACNA1A-239ENST00000637297 MAP3K15Q6ZN16 1313 aa11.8□□□□□ -0.52
CACNA1A-239ENST00000637297 ERVV-1B6SEH8 477 aa11.79□□□□□ -0.52
CACNA1A-239ENST00000637297 TCERG1O14776 1098 aaKnown RBP11.79□□□□□ -0.52
CACNA1A-239ENST00000637297 VAMP4O75379 141 aa11.79□□□□□ -0.52
CACNA1A-239ENST00000637297 TTLL7Q6ZT98 887 aa11.79□□□□□ -0.52
CACNA1A-239ENST00000637297 BCORQ6W2J9 1755 aa11.79□□□□□ -0.52
CACNA1A-239ENST00000637297 SCN7AQ01118 1682 aa11.78□□□□□ -0.52
CACNA1A-239ENST00000637297 DDX58O95786 925 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-239ENST00000637297 SLC4A2P04920 1241 aa11.78□□□□□ -0.52
CACNA1A-239ENST00000637297 TM4SF1P30408 202 aa11.78□□□□□ -0.52
CACNA1A-239ENST00000637297 NFIXQ14938 502 aa11.78□□□□□ -0.52
CACNA1A-239ENST00000637297 TBC1D9BQ66K14 1250 aa11.78□□□□□ -0.52
CACNA1A-239ENST00000637297 ANKRD13DQ6ZTN6 518 aa11.78□□□□□ -0.52
CACNA1A-239ENST00000637297 BCL2L12Q9HB09 334 aa11.78□□□□□ -0.52
CACNA1A-239ENST00000637297 RGL2O15211 777 aa11.77□□□□□ -0.53
CACNA1A-239ENST00000637297 SERPINB2P05120 415 aa11.77□□□□□ -0.53
CACNA1A-239ENST00000637297 GTF2E1P29083 439 aaPredicted RBP11.77□□□□□ -0.53
CACNA1A-239ENST00000637297 HLFQ16534 295 aa11.77□□□□□ -0.53
CACNA1A-239ENST00000637297 HSP90AB3PQ58FF7 597 aa11.77□□□□□ -0.53
CACNA1A-239ENST00000637297 RIC3Q7Z5B4 369 aa11.77□□□□□ -0.53
CACNA1A-239ENST00000637297 FHDC1Q9C0D6 1143 aaPredicted RBP11.77□□□□□ -0.53
CACNA1A-239ENST00000637297 PHAXQ9H814 394 aaKnown RBP11.77□□□□□ -0.53
CACNA1A-239ENST00000637297 NIP7Q9Y221 180 aaKnown RBP eCLIP11.77□□□□□ -0.53
CACNA1A-239ENST00000637297 AFDNP55196 1824 aaKnown RBP11.76□□□□□ -0.53
CACNA1A-239ENST00000637297 DCAF8L1A6NGE4 600 aa11.76□□□□□ -0.53
CACNA1A-239ENST00000637297 FAM177BA6PVY3 158 aa11.76□□□□□ -0.53
CACNA1A-239ENST00000637297 POLRMTO00411 1230 aaKnown RBP11.76□□□□□ -0.53
CACNA1A-239ENST00000637297 GIGYF2Q6Y7W6 1299 aaKnown RBP11.76□□□□□ -0.53
CACNA1A-239ENST00000637297 LRP10Q7Z4F1 713 aa11.76□□□□□ -0.53
CACNA1A-239ENST00000637297 PLBD2Q8NHP8 589 aa11.76□□□□□ -0.53
CACNA1A-239ENST00000637297 DDR1Q08345 913 aa11.75□□□□□ -0.53
CACNA1A-239ENST00000637297 TPTE2Q6XPS3 522 aa11.75□□□□□ -0.53
CACNA1A-239ENST00000637297 NBPF5PQ86XG9 351 aaPredicted RBP11.75□□□□□ -0.53
CACNA1A-239ENST00000637297 TRMT2AQ8IZ69 625 aaKnown RBP11.75□□□□□ -0.53
CACNA1A-239ENST00000637297 SYT17Q9BSW7 474 aa11.75□□□□□ -0.53
CACNA1A-239ENST00000637297 SUPT16HQ9Y5B9 1047 aaKnown RBP11.75□□□□□ -0.53
CACNA1A-239ENST00000637297 CD2APQ9Y5K6 639 aa11.75□□□□□ -0.53
CACNA1A-239ENST00000637297 CARMIL3Q8ND23 1372 aa11.75□□□□□ -0.53
CACNA1A-239ENST00000637297 CT47B1P0C2W7 299 aaPredicted RBP11.74□□□□□ -0.53
CACNA1A-239ENST00000637297 GPTP24298 496 aa11.74□□□□□ -0.53
CACNA1A-239ENST00000637297 ST5P78524 1137 aa11.74□□□□□ -0.53
CACNA1A-239ENST00000637297 FKBP5Q13451 457 aaPredicted RBP11.74□□□□□ -0.53
CACNA1A-239ENST00000637297 TCIRG1Q13488 830 aa11.74□□□□□ -0.53
CACNA1A-239ENST00000637297 PPP1R42Q7Z4L9 355 aa11.74□□□□□ -0.53
CACNA1A-239ENST00000637297 CNBD1Q8NA66 436 aa11.74□□□□□ -0.53
CACNA1A-239ENST00000637297 ZNF428Q96B54 188 aa11.74□□□□□ -0.53
CACNA1A-239ENST00000637297 NYXQ9GZU5 481 aa11.74□□□□□ -0.53
CACNA1A-239ENST00000637297 NEXNQ0ZGT2 675 aa11.73□□□□□ -0.53
CACNA1A-239ENST00000637297 FLIIQ13045 1269 aa11.73□□□□□ -0.53
CACNA1A-239ENST00000637297 PARP10Q53GL7 1025 aa11.73□□□□□ -0.53
CACNA1A-239ENST00000637297 ANKRD36CQ5JPF3 1778 aa11.73□□□□□ -0.53
CACNA1A-239ENST00000637297 KSR2Q6VAB6 950 aa11.73□□□□□ -0.53
CACNA1A-239ENST00000637297 ARFGEF2Q9Y6D5 1785 aa11.72□□□□□ -0.53
CACNA1A-239ENST00000637297 PI4KAP2A4QPH2 592 aa11.72□□□□□ -0.53
CACNA1A-239ENST00000637297 TGFB2P61812 414 aa11.72□□□□□ -0.53
CACNA1A-239ENST00000637297 G2E3Q7L622 706 aa11.72□□□□□ -0.53
CACNA1A-239ENST00000637297 ZNF34Q8IZ26 560 aa11.72□□□□□ -0.53
CACNA1A-239ENST00000637297 PI4KAP1Q8N8J0 262 aa11.72□□□□□ -0.53
CACNA1A-239ENST00000637297 MAP3K2Q9Y2U5 619 aa11.72□□□□□ -0.53
CACNA1A-239ENST00000637297 ATP10DQ9P241 1426 aa11.71□□□□□ -0.53
CACNA1A-239ENST00000637297 ATP5J2-PTCD1G3V325 749 aa11.71□□□□□ -0.53
CACNA1A-239ENST00000637297 PDE6BP35913 854 aa11.71□□□□□ -0.53
CACNA1A-239ENST00000637297 ALDH1L2Q3SY69 923 aa11.71□□□□□ -0.53
CACNA1A-239ENST00000637297 PRR5LQ6MZQ0 368 aa11.71□□□□□ -0.53
CACNA1A-239ENST00000637297 PELP1Q8IZL8 1130 aaKnown RBP11.71□□□□□ -0.53
CACNA1A-239ENST00000637297 CCDC24Q8N4L8 307 aa11.71□□□□□ -0.53
CACNA1A-239ENST00000637297 MYD88Q99836 296 aa11.71□□□□□ -0.53
CACNA1A-239ENST00000637297 UTP14AQ9BVJ6 771 aaKnown RBP11.71□□□□□ -0.53
CACNA1A-239ENST00000637297 SMC4Q9NTJ3 1288 aa11.71□□□□□ -0.53
CACNA1A-239ENST00000637297 KIF13BQ9NQT8 1826 aa11.71□□□□□ -0.54
CACNA1A-239ENST00000637297 N4BP2Q86UW6 1770 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-239ENST00000637297 NRXN2Q9P2S2 1712 aa11.7□□□□□ -0.54
CACNA1A-239ENST00000637297 SUSD4Q5VX71 490 aa11.7□□□□□ -0.54
CACNA1A-239ENST00000637297 NLGN2Q8NFZ4 835 aa11.7□□□□□ -0.54
CACNA1A-239ENST00000637297 SSH1Q8WYL5 1049 aa11.7□□□□□ -0.54
CACNA1A-239ENST00000637297 METTL22Q9BUU2 404 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-239ENST00000637297 BRIP1Q9BX63 1249 aa11.7□□□□□ -0.54
CACNA1A-239ENST00000637297 BCL2L13Q9BXK5 485 aa11.7□□□□□ -0.54
CACNA1A-239ENST00000637297 TRMT112Q9UI30 125 aaKnown RBP11.7□□□□□ -0.54
CACNA1A-239ENST00000637297 UBN2Q6ZU65 1347 aa11.69□□□□□ -0.54
CACNA1A-239ENST00000637297 A0A0G2JLW4 131 aa11.69□□□□□ -0.54
CACNA1A-239ENST00000637297 H0YIN7 160 aa11.69□□□□□ -0.54
CACNA1A-239ENST00000637297 GPR162Q16538 588 aa11.69□□□□□ -0.54
CACNA1A-239ENST00000637297 NLRP10Q86W26 655 aa11.69□□□□□ -0.54
CACNA1A-239ENST00000637297 NUTM1Q86Y26 1132 aa11.69□□□□□ -0.54
CACNA1A-239ENST00000637297 MRPL50Q8N5N7 158 aaKnown RBP11.69□□□□□ -0.54
CACNA1A-239ENST00000637297 DNAAF4Q8WXU2 420 aa11.69□□□□□ -0.54
CACNA1A-239ENST00000637297 PDZRN3Q9UPQ7 1066 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms