RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 ABCC4O15439 1325 aa13.57□□□□□ -0.24
CLN5-213ENST00000636681 PTPRCP08575 1304 aa13.57□□□□□ -0.24
CLN5-213ENST00000636681 COL15A1P39059 1388 aa13.57□□□□□ -0.24
CLN5-213ENST00000636681 ANKRD36CQ5JPF3 1778 aa13.56□□□□□ -0.24
CLN5-213ENST00000636681 IL6STP40189 918 aaPredicted RBP13.56□□□□□ -0.24
CLN5-213ENST00000636681 SLC27A3Q5K4L6 730 aa13.56□□□□□ -0.24
CLN5-213ENST00000636681 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.56□□□□□ -0.24
CLN5-213ENST00000636681 SRP68Q9UHB9 627 aaKnown RBP13.56□□□□□ -0.24
CLN5-213ENST00000636681 IPO8O15397 1037 aaKnown RBP13.55□□□□□ -0.24
CLN5-213ENST00000636681 SF3B2Q13435 895 aaKnown RBP13.55□□□□□ -0.24
CLN5-213ENST00000636681 ANKRD13DQ6ZTN6 518 aa13.55□□□□□ -0.24
CLN5-213ENST00000636681 RIC3Q7Z5B4 369 aa13.55□□□□□ -0.24
CLN5-213ENST00000636681 FTSJ3Q8IY81 847 aaKnown RBP13.55□□□□□ -0.24
CLN5-213ENST00000636681 ARHGAP45Q92619 1136 aa13.55□□□□□ -0.24
CLN5-213ENST00000636681 ATP5J2-PTCD1G3V325 749 aa13.55□□□□□ -0.24
CLN5-213ENST00000636681 RPS6KA4O75676 772 aa13.55□□□□□ -0.24
CLN5-213ENST00000636681 BAG6P46379 1132 aa13.55□□□□□ -0.24
CLN5-213ENST00000636681 CWF19L2Q2TBE0 894 aaKnown RBP13.55□□□□□ -0.24
CLN5-213ENST00000636681 RC3H1Q5TC82 1133 aaKnown RBP13.55□□□□□ -0.24
CLN5-213ENST00000636681 KSR2Q6VAB6 950 aa13.55□□□□□ -0.24
CLN5-213ENST00000636681 DZIP3Q86Y13 1208 aaKnown RBP13.55□□□□□ -0.24
CLN5-213ENST00000636681 DNAAF4Q8WXU2 420 aa13.55□□□□□ -0.24
CLN5-213ENST00000636681 AK7Q96M32 723 aa13.55□□□□□ -0.24
CLN5-213ENST00000636681 API5Q9BZZ5 524 aaKnown RBP13.55□□□□□ -0.24
CLN5-213ENST00000636681 GTF3C3Q9Y5Q9 886 aa13.55□□□□□ -0.24
CLN5-213ENST00000636681 ITPRIPQ8IWB1 547 aa13.54□□□□□ -0.24
CLN5-213ENST00000636681 JARID2Q92833 1246 aaPredicted RBP13.54□□□□□ -0.24
CLN5-213ENST00000636681 AKT1S1Q96B36 256 aa13.54□□□□□ -0.24
CLN5-213ENST00000636681 MYD88Q99836 296 aa13.54□□□□□ -0.24
CLN5-213ENST00000636681 SCN7AQ01118 1682 aa13.54□□□□□ -0.24
CLN5-213ENST00000636681 IGKV5-2P06315 115 aa13.53□□□□□ -0.24
CLN5-213ENST00000636681 PDE3AQ14432 1141 aa13.53□□□□□ -0.24
CLN5-213ENST00000636681 ARHGEF1Q92888 912 aaKnown RBP13.53□□□□□ -0.24
CLN5-213ENST00000636681 PDGFDQ9GZP0 370 aaPredicted RBP13.53□□□□□ -0.24
CLN5-213ENST00000636681 MAP3K15Q6ZN16 1313 aa13.53□□□□□ -0.24
CLN5-213ENST00000636681 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.53□□□□□ -0.24
CLN5-213ENST00000636681 CAMTA2O94983 1202 aa13.53□□□□□ -0.24
CLN5-213ENST00000636681 BEND3Q5T5X7 828 aa13.53□□□□□ -0.24
CLN5-213ENST00000636681 PLBD2Q8NHP8 589 aa13.53□□□□□ -0.24
CLN5-213ENST00000636681 CHMP4AQ9BY43 222 aa13.53□□□□□ -0.24
CLN5-213ENST00000636681 BCL2L12Q9HB09 334 aa13.53□□□□□ -0.24
CLN5-213ENST00000636681 RTCBQ9Y3I0 505 aaKnown RBP13.53□□□□□ -0.24
CLN5-213ENST00000636681 GPTP24298 496 aa13.52□□□□□ -0.25
CLN5-213ENST00000636681 MVPQ14764 893 aaKnown RBP13.52□□□□□ -0.25
CLN5-213ENST00000636681 INTS3Q68E01 1043 aaKnown RBP13.52□□□□□ -0.25
CLN5-213ENST00000636681 C1orf115Q9H7X2 142 aa13.52□□□□□ -0.25
CLN5-213ENST00000636681 DDX58O95786 925 aaKnown RBP13.51□□□□□ -0.25
CLN5-213ENST00000636681 USPL1Q5W0Q7 1092 aa13.51□□□□□ -0.25
CLN5-213ENST00000636681 KIF6Q6ZMV9 814 aa13.51□□□□□ -0.25
CLN5-213ENST00000636681 MEIS3Q99687 375 aa13.51□□□□□ -0.25
CLN5-213ENST00000636681 METTL22Q9BUU2 404 aaPredicted RBP13.51□□□□□ -0.25
CLN5-213ENST00000636681 TFCP2L1Q9NZI6 479 aa13.51□□□□□ -0.25
CLN5-213ENST00000636681 NEFLP07196 543 aa13.5□□□□□ -0.25
CLN5-213ENST00000636681 PXDNLA1KZ92 1463 aa13.5□□□□□ -0.25
CLN5-213ENST00000636681 CASZ1Q86V15 1759 aa13.5□□□□□ -0.25
CLN5-213ENST00000636681 RTL5Q5HYW3 569 aaPredicted RBP13.5□□□□□ -0.25
CLN5-213ENST00000636681 GIGYF2Q6Y7W6 1299 aaKnown RBP13.5□□□□□ -0.25
CLN5-213ENST00000636681 COL23A1Q86Y22 540 aaPredicted RBP13.5□□□□□ -0.25
CLN5-213ENST00000636681 SYNE4Q8N205 404 aa13.5□□□□□ -0.25
CLN5-213ENST00000636681 UBN2Q6ZU65 1347 aa13.49□□□□□ -0.25
CLN5-213ENST00000636681 PNPLA7Q6ZV29 1317 aa13.49□□□□□ -0.25
CLN5-213ENST00000636681 FAM177BA6PVY3 158 aa13.49□□□□□ -0.25
CLN5-213ENST00000636681 NEURL1BA8MQ27 555 aa13.49□□□□□ -0.25
CLN5-213ENST00000636681 ZBTB7BO15156 539 aaPredicted RBP13.49□□□□□ -0.25
CLN5-213ENST00000636681 TRAPPC3LQ5T215 181 aa13.49□□□□□ -0.25
CLN5-213ENST00000636681 SRCIN1Q9C0H9 1055 aa13.49□□□□□ -0.25
CLN5-213ENST00000636681 ATP10DQ9P241 1426 aa13.48□□□□□ -0.25
CLN5-213ENST00000636681 NBPF7P0C2Y1 421 aaPredicted RBP13.48□□□□□ -0.25
CLN5-213ENST00000636681 TCIRG1Q13488 830 aa13.48□□□□□ -0.25
CLN5-213ENST00000636681 SLC15A2Q16348 729 aa13.48□□□□□ -0.25
CLN5-213ENST00000636681 BICDL1Q6ZP65 573 aa13.48□□□□□ -0.25
CLN5-213ENST00000636681 NPM2Q86SE8 214 aaKnown RBP13.48□□□□□ -0.25
CLN5-213ENST00000636681 CCDC125Q86Z20 511 aa13.48□□□□□ -0.25
CLN5-213ENST00000636681 USP44Q9H0E7 712 aa13.48□□□□□ -0.25
CLN5-213ENST00000636681 NARFQ9UHQ1 456 aa13.48□□□□□ -0.25
CLN5-213ENST00000636681 QSER1Q2KHR3 1735 aa13.48□□□□□ -0.25
CLN5-213ENST00000636681 MSH5O43196 834 aa13.48□□□□□ -0.25
CLN5-213ENST00000636681 RFC4P35249 363 aa13.48□□□□□ -0.25
CLN5-213ENST00000636681 CCT4P50991 539 aaKnown RBP13.48□□□□□ -0.25
CLN5-213ENST00000636681 TBC1D9BQ66K14 1250 aa13.48□□□□□ -0.25
CLN5-213ENST00000636681 USP42Q9H9J4 1324 aaKnown RBP13.47□□□□□ -0.25
CLN5-213ENST00000636681 LINS1Q8NG48 757 aa13.47□□□□□ -0.25
CLN5-213ENST00000636681 ISCA1Q9BUE6 129 aa13.47□□□□□ -0.25
CLN5-213ENST00000636681 ERVV-1B6SEH8 477 aa13.46□□□□□ -0.25
CLN5-213ENST00000636681 MS4A1P11836 297 aa13.46□□□□□ -0.25
CLN5-213ENST00000636681 SSFA2P28290 1259 aa13.46□□□□□ -0.25
CLN5-213ENST00000636681 GCKRQ14397 625 aa13.46□□□□□ -0.25
CLN5-213ENST00000636681 MSL1Q68DK7 614 aa13.46□□□□□ -0.25
CLN5-213ENST00000636681 ZBTB40Q9NUA8 1239 aa13.46□□□□□ -0.25
CLN5-213ENST00000636681 PCDHB15Q9Y5E8 787 aa13.46□□□□□ -0.25
CLN5-213ENST00000636681 A0A087WZG4 1122 aa13.45□□□□□ -0.26
CLN5-213ENST00000636681 ZPR1O75312 459 aa13.45□□□□□ -0.26
CLN5-213ENST00000636681 GYS1P13807 737 aa13.45□□□□□ -0.26
CLN5-213ENST00000636681 NEXNQ0ZGT2 675 aa13.45□□□□□ -0.26
CLN5-213ENST00000636681 NLRP10Q86W26 655 aa13.45□□□□□ -0.26
CLN5-213ENST00000636681 ZNF34Q8IZ26 560 aa13.45□□□□□ -0.26
CLN5-213ENST00000636681 CCDC24Q8N4L8 307 aa13.45□□□□□ -0.26
CLN5-213ENST00000636681 STK32BQ9NY57 414 aa13.45□□□□□ -0.26
CLN5-213ENST00000636681 DDX19BQ9UMR2 479 aa13.45□□□□□ -0.26
CLN5-213ENST00000636681 TAF1P21675 1872 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms