RNA–Protein interactions for RNA: ENST00000636405.1

CLN5-209, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 2,511 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-209ENST00000636405 CCDC8Q9H0W5 538 aaPredicted RBP18.26■□□□□ 0.51
CLN5-209ENST00000636405 KDM4FA0A1W2PPD8 638 aa18.25■□□□□ 0.51
CLN5-209ENST00000636405 SASH1O94885 1247 aa18.25■□□□□ 0.51
CLN5-209ENST00000636405 LARP1Q6PKG0 1096 aaKnown RBP18.25■□□□□ 0.51
CLN5-209ENST00000636405 LRP10Q7Z4F1 713 aa18.25■□□□□ 0.51
CLN5-209ENST00000636405 AACSQ86V21 672 aa18.25■□□□□ 0.51
CLN5-209ENST00000636405 FMNL2Q96PY5 1086 aa18.25■□□□□ 0.51
CLN5-209ENST00000636405 C5P01031 1676 aa18.25■□□□□ 0.51
CLN5-209ENST00000636405 HSP90AB4PQ58FF6 505 aa18.25■□□□□ 0.51
CLN5-209ENST00000636405 CHAMP1Q96JM3 812 aa18.25■□□□□ 0.51
CLN5-209ENST00000636405 NEXNQ0ZGT2 675 aa18.24■□□□□ 0.51
CLN5-209ENST00000636405 GCKRQ14397 625 aa18.24■□□□□ 0.51
CLN5-209ENST00000636405 FOXD4L5Q5VV16 416 aaPredicted RBP18.24■□□□□ 0.51
CLN5-209ENST00000636405 FOXD4L4Q8WXT5 416 aaPredicted RBP18.24■□□□□ 0.51
CLN5-209ENST00000636405 TLR7Q9NYK1 1049 aaKnown RBP18.24■□□□□ 0.51
CLN5-209ENST00000636405 AK9Q5TCS8 1911 aa18.24■□□□□ 0.51
CLN5-209ENST00000636405 AOX1Q06278 1338 aa18.24■□□□□ 0.51
CLN5-209ENST00000636405 ZCRB1Q8TBF4 217 aaKnown RBP18.24■□□□□ 0.51
CLN5-209ENST00000636405 METTL22Q9BUU2 404 aaPredicted RBP18.24■□□□□ 0.51
CLN5-209ENST00000636405 ADAMTS7Q9UKP4 1686 aa18.24■□□□□ 0.51
CLN5-209ENST00000636405 IFIT2P09913 472 aaKnown RBP18.23■□□□□ 0.51
CLN5-209ENST00000636405 EAF2Q96CJ1 260 aaPredicted RBP18.23■□□□□ 0.51
CLN5-209ENST00000636405 SCN11AQ9UI33 1791 aa18.23■□□□□ 0.51
CLN5-209ENST00000636405 CPDO75976 1380 aa18.23■□□□□ 0.51
CLN5-209ENST00000636405 TUBGCP6Q96RT7 1819 aa18.23■□□□□ 0.51
CLN5-209ENST00000636405 DDX11L8A8MPP1 907 aa18.22■□□□□ 0.51
CLN5-209ENST00000636405 CNTROBQ8N137 903 aa18.22■□□□□ 0.51
CLN5-209ENST00000636405 GBP4Q96PP9 640 aa18.22■□□□□ 0.51
CLN5-209ENST00000636405 WDR17Q8IZU2 1322 aa18.22■□□□□ 0.51
CLN5-209ENST00000636405 G3BP1Q13283 466 aaKnown RBP eCLIP18.22■□□□□ 0.51
CLN5-209ENST00000636405 UBE3BQ7Z3V4 1068 aa18.22■□□□□ 0.51
CLN5-209ENST00000636405 TMX3Q96JJ7 454 aa18.22■□□□□ 0.51
CLN5-209ENST00000636405 LARP6Q9BRS8 491 aaKnown RBP18.22■□□□□ 0.51
CLN5-209ENST00000636405 XIRP1Q702N8 1843 aaKnown RBP18.22■□□□□ 0.51
CLN5-209ENST00000636405 CRYBG1Q9Y4K1 1723 aa18.22■□□□□ 0.51
CLN5-209ENST00000636405 MCCP23508 829 aa18.21■□□□□ 0.51
CLN5-209ENST00000636405 UTYO14607 1347 aa18.21■□□□□ 0.51
CLN5-209ENST00000636405 NBPF26B4DH59 902 aa18.21■□□□□ 0.51
CLN5-209ENST00000636405 SGSM2O43147 1006 aa18.21■□□□□ 0.51
CLN5-209ENST00000636405 A1BGP04217 495 aa18.21■□□□□ 0.51
CLN5-209ENST00000636405 NBPF14Q5TI25 921 aa18.21■□□□□ 0.51
CLN5-209ENST00000636405 NBPF10Q6P3W6 841 aaKnown RBP18.21■□□□□ 0.51
CLN5-209ENST00000636405 NBPF15Q8N660 670 aa18.21■□□□□ 0.51
CLN5-209ENST00000636405 ECHDC1Q9NTX5 307 aa18.21■□□□□ 0.51
CLN5-209ENST00000636405 SOS2Q07890 1332 aaPredicted RBP18.21■□□□□ 0.51
CLN5-209ENST00000636405 GLRX3O76003 335 aaKnown RBP18.2■□□□□ 0.5
CLN5-209ENST00000636405 EVA1CP58658 441 aa18.2■□□□□ 0.5
CLN5-209ENST00000636405 DTNBO60941 627 aa18.19■□□□□ 0.5
CLN5-209ENST00000636405 BAG4O95429 457 aaKnown RBP18.19■□□□□ 0.5
CLN5-209ENST00000636405 TTLL7Q6ZT98 887 aa18.19■□□□□ 0.5
CLN5-209ENST00000636405 RASEFQ8IZ41 740 aa18.19■□□□□ 0.5
CLN5-209ENST00000636405 BOLA2Q9H3K6 86 aa18.19■□□□□ 0.5
CLN5-209ENST00000636405 A0A087WZG4 1122 aa18.18■□□□□ 0.5
CLN5-209ENST00000636405 CPA1P15085 419 aa18.18■□□□□ 0.5
CLN5-209ENST00000636405 LSG1Q9H089 658 aaKnown RBP18.18■□□□□ 0.5
CLN5-209ENST00000636405 LMTK3Q96Q04 1460 aa18.18■□□□□ 0.5
CLN5-209ENST00000636405 HSPA4P34932 840 aa18.18■□□□□ 0.5
CLN5-209ENST00000636405 MCTP1Q6DN14 999 aa18.18■□□□□ 0.5
CLN5-209ENST00000636405 ZDHHC9Q9Y397 364 aa18.18■□□□□ 0.5
CLN5-209ENST00000636405 CCDC9Q9Y3X0 531 aaKnown RBP18.18■□□□□ 0.5
CLN5-209ENST00000636405 TTC41PQ6P2S7 1318 aa18.18■□□□□ 0.5
CLN5-209ENST00000636405 PTH1RQ03431 593 aa18.17■□□□□ 0.5
CLN5-209ENST00000636405 ERC1Q8IUD2 1116 aa18.17■□□□□ 0.5
CLN5-209ENST00000636405 EDC3Q96F86 508 aaKnown RBP18.17■□□□□ 0.5
CLN5-209ENST00000636405 DIAPH3Q9NSV4 1193 aa18.17■□□□□ 0.5
CLN5-209ENST00000636405 NDUFB9Q9Y6M9 179 aa18.17■□□□□ 0.5
CLN5-209ENST00000636405 IL2RBP14784 551 aa18.17■□□□□ 0.5
CLN5-209ENST00000636405 HDAC5Q9UQL6 1122 aa18.17■□□□□ 0.5
CLN5-209ENST00000636405 ZNF330Q9Y3S2 320 aaPredicted RBP18.17■□□□□ 0.5
CLN5-209ENST00000636405 PCDH11XQ9BZA7 1347 aa18.17■□□□□ 0.5
CLN5-209ENST00000636405 PCDH11YQ9BZA8 1340 aa18.17■□□□□ 0.5
CLN5-209ENST00000636405 USP42Q9H9J4 1324 aaKnown RBP18.17■□□□□ 0.5
CLN5-209ENST00000636405 ZBTB3Q9H5J0 574 aa18.16■□□□□ 0.5
CLN5-209ENST00000636405 FAM227BQ96M60 508 aa18.16■□□□□ 0.5
CLN5-209ENST00000636405 SNX14Q9Y5W7 946 aa18.16■□□□□ 0.5
CLN5-209ENST00000636405 COL5A2P05997 1499 aaPredicted RBP18.16■□□□□ 0.5
CLN5-209ENST00000636405 GOLGA6L3A6NEY3 463 aa18.15■□□□□ 0.5
CLN5-209ENST00000636405 CYP2E1P05181 493 aaPredicted RBP18.15■□□□□ 0.5
CLN5-209ENST00000636405 PANK2Q9BZ23 570 aa18.15■□□□□ 0.5
CLN5-209ENST00000636405 CHMP3Q9Y3E7 222 aa18.15■□□□□ 0.5
CLN5-209ENST00000636405 STRCQ7RTU9 1775 aa18.15■□□□□ 0.5
CLN5-209ENST00000636405 RAD50Q92878 1312 aa18.15■□□□□ 0.5
CLN5-209ENST00000636405 XRCC6P12956 609 aaKnown RBP eCLIP18.15■□□□□ 0.5
CLN5-209ENST00000636405 ANAPC15P60006 121 aa18.15■□□□□ 0.5
CLN5-209ENST00000636405 KIAA1211Q6ZU35 1233 aa18.15■□□□□ 0.5
CLN5-209ENST00000636405 MRC1P22897 1456 aa18.14■□□□□ 0.5
CLN5-209ENST00000636405 NUCB2P80303 420 aa18.14■□□□□ 0.49
CLN5-209ENST00000636405 GPATCH3Q96I76 525 aa18.14■□□□□ 0.49
CLN5-209ENST00000636405 PTPN12Q05209 780 aaKnown RBP18.14■□□□□ 0.49
CLN5-209ENST00000636405 TFCP2Q12800 502 aa18.14■□□□□ 0.49
CLN5-209ENST00000636405 PLBD2Q8NHP8 589 aa18.14■□□□□ 0.49
CLN5-209ENST00000636405 CHGBP05060 677 aa18.13■□□□□ 0.49
CLN5-209ENST00000636405 RFX5P48382 616 aaPredicted RBP18.13■□□□□ 0.49
CLN5-209ENST00000636405 FOXD4L6Q3SYB3 417 aaPredicted RBP18.13■□□□□ 0.49
CLN5-209ENST00000636405 FOXD4L3Q6VB84 417 aaPredicted RBP18.13■□□□□ 0.49
CLN5-209ENST00000636405 CARD10Q9BWT7 1032 aa18.13■□□□□ 0.49
CLN5-209ENST00000636405 CWC22Q9HCG8 908 aaKnown RBP18.13■□□□□ 0.49
CLN5-209ENST00000636405 LMBR1LQ6UX01 489 aa18.13■□□□□ 0.49
CLN5-209ENST00000636405 PKD1L3Q7Z443 1732 aa18.12■□□□□ 0.49
CLN5-209ENST00000636405 PRPF40BQ6NWY9 871 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms