RNA–Protein interactions for RNA: ENST00000636179.1

ZEB2-233, Transcript of zinc finger E-box binding homeobox 2, human

TSL 5

Gene ZEB2, Length 8,984 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB2-233	ENST00000636179	PAK3	O75914	559 aa	Predicted RBP	13.29	□□□□□ -0.28
ZEB2-233	ENST00000636179	MMRN2	Q9H8L6	949 aa		13.29	□□□□□ -0.28
ZEB2-233	ENST00000636179	MATR3	P43243	847 aa	Known RBP eCLIP	13.28	□□□□□ -0.28	2e-6	■■■□□ 18.3
ZEB2-233	ENST00000636179	RAP1GDS1	P52306	607 aa		13.28	□□□□□ -0.28
ZEB2-233	ENST00000636179	GIPC1	O14908	333 aa		13.28	□□□□□ -0.28
ZEB2-233	ENST00000636179	TBC1D5	Q92609	795 aa		13.28	□□□□□ -0.28
ZEB2-233	ENST00000636179	FYB2	Q5VWT5	728 aa		13.28	□□□□□ -0.28
ZEB2-233	ENST00000636179	PDXDC1	Q6P996	788 aa		13.28	□□□□□ -0.28
ZEB2-233	ENST00000636179	LMAN1	P49257	510 aa		13.28	□□□□□ -0.28
ZEB2-233	ENST00000636179	EP400NL	Q6ZTU2	488 aa		13.28	□□□□□ -0.28
ZEB2-233	ENST00000636179	CACTIN	Q8WUQ7	758 aa	Known RBP	13.28	□□□□□ -0.28
ZEB2-233	ENST00000636179	NEDD9	Q14511	834 aa		13.28	□□□□□ -0.28
ZEB2-233	ENST00000636179	VPS52	Q8N1B4	723 aa		13.28	□□□□□ -0.28
ZEB2-233	ENST00000636179	ANKRD24	Q8TF21	1146 aa		13.28	□□□□□ -0.28
ZEB2-233	ENST00000636179	RB1CC1	Q8TDY2	1594 aa		13.28	□□□□□ -0.28
ZEB2-233	ENST00000636179	RPGRIP1L	Q68CZ1	1315 aa		13.28	□□□□□ -0.28
ZEB2-233	ENST00000636179	GNAI1	P63096	354 aa		13.27	□□□□□ -0.28
ZEB2-233	ENST00000636179	GPR161	Q8N6U8	529 aa	Known RBP	13.27	□□□□□ -0.28
ZEB2-233	ENST00000636179	PUS7	Q96PZ0	661 aa	Known RBP	13.27	□□□□□ -0.28
ZEB2-233	ENST00000636179	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.27	□□□□□ -0.28
ZEB2-233	ENST00000636179	FAM8A1	Q9UBU6	413 aa		13.27	□□□□□ -0.28
ZEB2-233	ENST00000636179	SPC24	Q8NBT2	197 aa		13.27	□□□□□ -0.28
ZEB2-233	ENST00000636179	CCT6B	Q92526	530 aa		13.27	□□□□□ -0.28
ZEB2-233	ENST00000636179	NUCKS1	Q9H1E3	243 aa	Known RBP	13.27	□□□□□ -0.28
ZEB2-233	ENST00000636179	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.27	□□□□□ -0.29
ZEB2-233	ENST00000636179	GRPEL1	Q9HAV7	217 aa		13.27	□□□□□ -0.29
ZEB2-233	ENST00000636179	MTRF1L	Q9UGC7	380 aa	Known RBP	13.27	□□□□□ -0.29
ZEB2-233	ENST00000636179	TOP1	P11387	765 aa	Known RBP	13.27	□□□□□ -0.29
ZEB2-233	ENST00000636179	PFDN4	Q9NQP4	134 aa		13.27	□□□□□ -0.29
ZEB2-233	ENST00000636179	CCDC69	A6NI79	296 aa		13.27	□□□□□ -0.29
ZEB2-233	ENST00000636179	TBC1D31	Q96DN5	1066 aa		13.27	□□□□□ -0.29
ZEB2-233	ENST00000636179	APLF	Q8IW19	511 aa	Predicted RBP	13.26	□□□□□ -0.29
ZEB2-233	ENST00000636179	CCDC170	Q8IYT3	715 aa		13.26	□□□□□ -0.29
ZEB2-233	ENST00000636179	GCC1	Q96CN9	775 aa		13.26	□□□□□ -0.29
ZEB2-233	ENST00000636179	SYF2	O95926	243 aa	Known RBP	13.26	□□□□□ -0.29
ZEB2-233	ENST00000636179	BMP15	O95972	392 aa		13.26	□□□□□ -0.29
ZEB2-233	ENST00000636179	DEUP1	Q05D60	604 aa		13.26	□□□□□ -0.29
ZEB2-233	ENST00000636179	SH3BP5	O60239	455 aa		13.26	□□□□□ -0.29
ZEB2-233	ENST00000636179	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.26	□□□□□ -0.29
ZEB2-233	ENST00000636179	CCDC68	Q9H2F9	335 aa		13.26	□□□□□ -0.29
ZEB2-233	ENST00000636179	HYPK	Q9NX55	129 aa		13.26	□□□□□ -0.29
ZEB2-233	ENST00000636179	CEP104	O60308	925 aa		13.26	□□□□□ -0.29
ZEB2-233	ENST00000636179	RRP1	P56182	461 aa	Known RBP	13.26	□□□□□ -0.29
ZEB2-233	ENST00000636179	NFKBIB	Q15653	356 aa		13.26	□□□□□ -0.29
ZEB2-233	ENST00000636179	RBM26	Q5T8P6	1007 aa	Known RBP	13.26	□□□□□ -0.29
ZEB2-233	ENST00000636179	MUM1L1	Q5H9M0	696 aa		13.25	□□□□□ -0.29
ZEB2-233	ENST00000636179	AP1AR	Q63HQ0	302 aa		13.25	□□□□□ -0.29
ZEB2-233	ENST00000636179	CETN3	O15182	167 aa		13.25	□□□□□ -0.29
ZEB2-233	ENST00000636179	ZNF131	P52739	623 aa		13.25	□□□□□ -0.29
ZEB2-233	ENST00000636179	SYNC	Q9H7C4	482 aa		13.25	□□□□□ -0.29
ZEB2-233	ENST00000636179	STRN4	Q9NRL3	753 aa		13.25	□□□□□ -0.29
ZEB2-233	ENST00000636179	MAATS1	Q7Z4T9	603 aa		13.25	□□□□□ -0.29
ZEB2-233	ENST00000636179	ATP2A3	Q93084	1043 aa		13.25	□□□□□ -0.29
ZEB2-233	ENST00000636179	CCDC62	Q6P9F0	684 aa		13.25	□□□□□ -0.29
ZEB2-233	ENST00000636179	GFM2	Q969S9	779 aa	Known RBP	13.25	□□□□□ -0.29
ZEB2-233	ENST00000636179	JAKMIP1	Q96N16	626 aa	Known RBP	13.25	□□□□□ -0.29
ZEB2-233	ENST00000636179	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.25	□□□□□ -0.29
ZEB2-233	ENST00000636179	TMCO5A	Q8N6Q1	288 aa		13.25	□□□□□ -0.29
ZEB2-233	ENST00000636179	TSHZ2	Q9NRE2	1034 aa		13.25	□□□□□ -0.29
ZEB2-233	ENST00000636179	RUFY3	Q7L099	469 aa		13.24	□□□□□ -0.29
ZEB2-233	ENST00000636179	HELB	Q8NG08	1087 aa	Predicted RBP	13.24	□□□□□ -0.29
ZEB2-233	ENST00000636179	SPAG1	Q07617	926 aa		13.24	□□□□□ -0.29
ZEB2-233	ENST00000636179	PHLDB3	Q6NSJ2	640 aa		13.24	□□□□□ -0.29
ZEB2-233	ENST00000636179	CLUAP1	Q96AJ1	413 aa		13.24	□□□□□ -0.29
ZEB2-233	ENST00000636179	RILPL1	Q5EBL4	403 aa		13.24	□□□□□ -0.29
ZEB2-233	ENST00000636179	NRBF2	Q96F24	287 aa		13.24	□□□□□ -0.29
ZEB2-233	ENST00000636179	PCK1	P35558	622 aa		13.24	□□□□□ -0.29
ZEB2-233	ENST00000636179	WASHC4	Q2M389	1173 aa		13.24	□□□□□ -0.29
ZEB2-233	ENST00000636179	INTS8	Q75QN2	995 aa	Known RBP	13.24	□□□□□ -0.29
ZEB2-233	ENST00000636179	TSGA10	Q9BZW7	698 aa		13.24	□□□□□ -0.29
ZEB2-233	ENST00000636179	UVSSA	Q2YD98	709 aa		13.24	□□□□□ -0.29
ZEB2-233	ENST00000636179	RMND1	Q9NWS8	449 aa		13.24	□□□□□ -0.29
ZEB2-233	ENST00000636179	BICDL2	A1A5D9	508 aa		13.23	□□□□□ -0.29
ZEB2-233	ENST00000636179	NAA25	Q14CX7	972 aa		13.23	□□□□□ -0.29
ZEB2-233	ENST00000636179	NGDN	Q8NEJ9	315 aa	Known RBP	13.23	□□□□□ -0.29
ZEB2-233	ENST00000636179	CCDC183	Q5T5S1	534 aa		13.23	□□□□□ -0.29
ZEB2-233	ENST00000636179	CWC27	Q6UX04	472 aa	Known RBP	13.23	□□□□□ -0.29
ZEB2-233	ENST00000636179	EVC2	Q86UK5	1308 aa		13.23	□□□□□ -0.29
ZEB2-233	ENST00000636179	UTP14A	Q9BVJ6	771 aa	Known RBP	13.23	□□□□□ -0.29
ZEB2-233	ENST00000636179		A0A087WZG4	1122 aa		13.23	□□□□□ -0.29
ZEB2-233	ENST00000636179	CYLC1	P35663	651 aa	Predicted RBP	13.23	□□□□□ -0.29
ZEB2-233	ENST00000636179	DBN1	Q16643	649 aa		13.23	□□□□□ -0.29
ZEB2-233	ENST00000636179	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.23	□□□□□ -0.29
ZEB2-233	ENST00000636179	ZNF428	Q96B54	188 aa		13.23	□□□□□ -0.29
ZEB2-233	ENST00000636179	COG3	Q96JB2	828 aa		13.23	□□□□□ -0.29
ZEB2-233	ENST00000636179	PPP1R12C	Q9BZL4	782 aa		13.23	□□□□□ -0.29
ZEB2-233	ENST00000636179	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
ZEB2-233	ENST00000636179	NOP14	P78316	857 aa	Known RBP	13.22	□□□□□ -0.29
ZEB2-233	ENST00000636179	NONO	Q15233	471 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
ZEB2-233	ENST00000636179	TRIML1	Q8N9V2	468 aa		13.22	□□□□□ -0.29
ZEB2-233	ENST00000636179	DDX27	Q96GQ7	796 aa	Known RBP	13.22	□□□□□ -0.29
ZEB2-233	ENST00000636179	CTAGE9	A4FU28	777 aa		13.22	□□□□□ -0.29
ZEB2-233	ENST00000636179	USP5	P45974	858 aa		13.22	□□□□□ -0.29
ZEB2-233	ENST00000636179	CCDC30	Q5VVM6	783 aa		13.22	□□□□□ -0.29
ZEB2-233	ENST00000636179	SKIL	P12757	684 aa		13.22	□□□□□ -0.29
ZEB2-233	ENST00000636179	CCDC144CP	Q8IYA2	1237 aa		13.22	□□□□□ -0.29
ZEB2-233	ENST00000636179	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	13.22	□□□□□ -0.29
ZEB2-233	ENST00000636179	ANLN	Q9NQW6	1124 aa		13.22	□□□□□ -0.29
ZEB2-233	ENST00000636179	PSMA4	P25789	261 aa	Known RBP	13.22	□□□□□ -0.29
ZEB2-233	ENST00000636179	NKIRAS1	Q9NYS0	192 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms