RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 RC3H1Q5TC82 1133 aaKnown RBP12.13□□□□□ -0.47
CACNA1A-223ENST00000636058 TTLL7Q6ZT98 887 aa12.13□□□□□ -0.47
CACNA1A-223ENST00000636058 RIC3Q7Z5B4 369 aa12.13□□□□□ -0.47
CACNA1A-223ENST00000636058 PLBD2Q8NHP8 589 aa12.13□□□□□ -0.47
CACNA1A-223ENST00000636058 LRRC4BQ9NT99 713 aa12.13□□□□□ -0.47
CACNA1A-223ENST00000636058 PPP4R2Q9NY27 417 aa12.13□□□□□ -0.47
CACNA1A-223ENST00000636058 APBA3O96018 575 aa12.12□□□□□ -0.47
CACNA1A-223ENST00000636058 METTL22Q9BUU2 404 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-223ENST00000636058 CHMP4BQ9H444 224 aaKnown RBP12.12□□□□□ -0.47
CACNA1A-223ENST00000636058 ZBTB40Q9NUA8 1239 aa12.12□□□□□ -0.47
CACNA1A-223ENST00000636058 IBTKQ9P2D0 1353 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-223ENST00000636058 TXNRD1Q16881 649 aa12.11□□□□□ -0.47
CACNA1A-223ENST00000636058 PROM2Q8N271 834 aa12.11□□□□□ -0.47
CACNA1A-223ENST00000636058 LINS1Q8NG48 757 aa12.11□□□□□ -0.47
CACNA1A-223ENST00000636058 SRCIN1Q9C0H9 1055 aa12.11□□□□□ -0.47
CACNA1A-223ENST00000636058 ZNF330Q9Y3S2 320 aaPredicted RBP12.11□□□□□ -0.47
CACNA1A-223ENST00000636058 MAP3K15Q6ZN16 1313 aa12.11□□□□□ -0.47
CACNA1A-223ENST00000636058 COL15A1P39059 1388 aa12.1□□□□□ -0.47
CACNA1A-223ENST00000636058 ALDH1L1O75891 902 aa12.1□□□□□ -0.47
CACNA1A-223ENST00000636058 HMGB2P26583 209 aaKnown RBP12.1□□□□□ -0.47
CACNA1A-223ENST00000636058 KIF6Q6ZMV9 814 aa12.1□□□□□ -0.47
CACNA1A-223ENST00000636058 ZBTB3Q9H5J0 574 aa12.1□□□□□ -0.47
CACNA1A-223ENST00000636058 BCORQ6W2J9 1755 aa12.1□□□□□ -0.47
CACNA1A-223ENST00000636058 ERVV-1B6SEH8 477 aa12.09□□□□□ -0.47
CACNA1A-223ENST00000636058 RPS6KA4O75676 772 aa12.09□□□□□ -0.47
CACNA1A-223ENST00000636058 IGKV5-2P06315 115 aa12.09□□□□□ -0.47
CACNA1A-223ENST00000636058 NEXNQ0ZGT2 675 aa12.09□□□□□ -0.47
CACNA1A-223ENST00000636058 NPM2Q86SE8 214 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-223ENST00000636058 DZIP3Q86Y13 1208 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-223ENST00000636058 MEIS3Q99687 375 aa12.09□□□□□ -0.47
CACNA1A-223ENST00000636058 MYD88Q99836 296 aa12.09□□□□□ -0.47
CACNA1A-223ENST00000636058 ANKRD36CQ5JPF3 1778 aa12.09□□□□□ -0.47
CACNA1A-223ENST00000636058 AFDNP55196 1824 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-223ENST00000636058 UBR3Q6ZT12 1888 aa12.08□□□□□ -0.48
CACNA1A-223ENST00000636058 SCN7AQ01118 1682 aa12.08□□□□□ -0.48
CACNA1A-223ENST00000636058 A0A087WZG4 1122 aa12.08□□□□□ -0.48
CACNA1A-223ENST00000636058 NEURL1BA8MQ27 555 aa12.08□□□□□ -0.48
CACNA1A-223ENST00000636058 GNPATO15228 680 aa12.08□□□□□ -0.48
CACNA1A-223ENST00000636058 CWF19L2Q2TBE0 894 aaKnown RBP12.08□□□□□ -0.48
CACNA1A-223ENST00000636058 GIGYF2Q6Y7W6 1299 aaKnown RBP12.08□□□□□ -0.48
CACNA1A-223ENST00000636058 USP44Q9H0E7 712 aa12.08□□□□□ -0.48
CACNA1A-223ENST00000636058 TBC1D2BQ9UPU7 963 aa12.08□□□□□ -0.48
CACNA1A-223ENST00000636058 NUP98P52948 1817 aa12.08□□□□□ -0.48
CACNA1A-223ENST00000636058 C4AP0C0L4 1744 aa12.08□□□□□ -0.48
CACNA1A-223ENST00000636058 GNAI3P08754 354 aa12.07□□□□□ -0.48
CACNA1A-223ENST00000636058 HLFQ16534 295 aa12.07□□□□□ -0.48
CACNA1A-223ENST00000636058 B4GALNT3Q6L9W6 998 aa12.07□□□□□ -0.48
CACNA1A-223ENST00000636058 CCDC136Q96JN2 1154 aa12.07□□□□□ -0.48
CACNA1A-223ENST00000636058 AK7Q96M32 723 aa12.07□□□□□ -0.48
CACNA1A-223ENST00000636058 RTCBQ9Y3I0 505 aaKnown RBP12.07□□□□□ -0.48
CACNA1A-223ENST00000636058 PCDHB15Q9Y5E8 787 aa12.07□□□□□ -0.48
CACNA1A-223ENST00000636058 UTYO14607 1347 aa12.07□□□□□ -0.48
CACNA1A-223ENST00000636058 RGL2O15211 777 aa12.06□□□□□ -0.48
CACNA1A-223ENST00000636058 CAMTA2O94983 1202 aa12.06□□□□□ -0.48
CACNA1A-223ENST00000636058 TCIRG1Q13488 830 aa12.06□□□□□ -0.48
CACNA1A-223ENST00000636058 GCKRQ14397 625 aa12.06□□□□□ -0.48
CACNA1A-223ENST00000636058 HSP90AB3PQ58FF7 597 aa12.06□□□□□ -0.48
CACNA1A-223ENST00000636058 AMIGO3Q86WK7 504 aa12.06□□□□□ -0.48
CACNA1A-223ENST00000636058 ARXQ96QS3 562 aa12.06□□□□□ -0.48
CACNA1A-223ENST00000636058 CAMKK2Q96RR4 588 aa12.06□□□□□ -0.48
CACNA1A-223ENST00000636058 ISCA1Q9BUE6 129 aa12.06□□□□□ -0.48
CACNA1A-223ENST00000636058 ATP5J2-PTCD1G3V325 749 aa12.05□□□□□ -0.48
CACNA1A-223ENST00000636058 GRM8O00222 908 aa12.05□□□□□ -0.48
CACNA1A-223ENST00000636058 NBPF7P0C2Y1 421 aaPredicted RBP12.05□□□□□ -0.48
CACNA1A-223ENST00000636058 ADRA2BP18089 450 aa12.05□□□□□ -0.48
CACNA1A-223ENST00000636058 TRIM28Q13263 835 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-223ENST00000636058 CCDC191Q8NCU4 936 aa12.05□□□□□ -0.48
CACNA1A-223ENST00000636058 AKT1S1Q96B36 256 aa12.05□□□□□ -0.48
CACNA1A-223ENST00000636058 C1orf115Q9H7X2 142 aa12.05□□□□□ -0.48
CACNA1A-223ENST00000636058 GNAI2P04899 355 aa12.04□□□□□ -0.48
CACNA1A-223ENST00000636058 UBTFL1P0CB47 393 aaPredicted RBP12.04□□□□□ -0.48
CACNA1A-223ENST00000636058 EN1Q05925 392 aaPredicted RBP12.04□□□□□ -0.48
CACNA1A-223ENST00000636058 SF3B2Q13435 895 aaKnown RBP12.04□□□□□ -0.48
CACNA1A-223ENST00000636058 EZH2Q15910 746 aaKnown RBP12.04□□□□□ -0.48
CACNA1A-223ENST00000636058 SMIM5Q71RC9 77 aa12.04□□□□□ -0.48
CACNA1A-223ENST00000636058 CCDC125Q86Z20 511 aa12.04□□□□□ -0.48
CACNA1A-223ENST00000636058 ARHGEF1Q92888 912 aaKnown RBP12.04□□□□□ -0.48
CACNA1A-223ENST00000636058 CWC25Q9NXE8 425 aaPredicted RBP12.04□□□□□ -0.48
CACNA1A-223ENST00000636058 C9orf78Q9NZ63 289 aaPredicted RBP12.04□□□□□ -0.48
CACNA1A-223ENST00000636058 NARFQ9UHQ1 456 aa12.04□□□□□ -0.48
CACNA1A-223ENST00000636058 TUBGCP6Q96RT7 1819 aa12.04□□□□□ -0.48
CACNA1A-223ENST00000636058 SSFA2P28290 1259 aa12.03□□□□□ -0.48
CACNA1A-223ENST00000636058 BAG6P46379 1132 aa12.03□□□□□ -0.48
CACNA1A-223ENST00000636058 HDAC1Q13547 482 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-223ENST00000636058 ZNF827Q17R98 1081 aa12.03□□□□□ -0.48
CACNA1A-223ENST00000636058 TRAPPC3LQ5T215 181 aa12.03□□□□□ -0.48
CACNA1A-223ENST00000636058 CLEC4GQ6UXB4 293 aa12.03□□□□□ -0.48
CACNA1A-223ENST00000636058 ZNF34Q8IZ26 560 aa12.03□□□□□ -0.48
CACNA1A-223ENST00000636058 ZNF652Q9Y2D9 606 aa12.03□□□□□ -0.48
CACNA1A-223ENST00000636058 KDM2BQ8NHM5 1336 aa12.03□□□□□ -0.48
CACNA1A-223ENST00000636058 USP42Q9H9J4 1324 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-223ENST00000636058 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.02□□□□□ -0.49
CACNA1A-223ENST00000636058 H7C1W4 665 aa12.02□□□□□ -0.49
CACNA1A-223ENST00000636058 PHF14O94880 888 aa12.02□□□□□ -0.49
CACNA1A-223ENST00000636058 IGHDP01880 384 aa12.02□□□□□ -0.49
CACNA1A-223ENST00000636058 CASP7P55210 303 aa12.02□□□□□ -0.49
CACNA1A-223ENST00000636058 USPL1Q5W0Q7 1092 aa12.02□□□□□ -0.49
CACNA1A-223ENST00000636058 CEP85Q6P2H3 762 aa12.02□□□□□ -0.49
CACNA1A-223ENST00000636058 NLRP10Q86W26 655 aa12.02□□□□□ -0.49
CACNA1A-223ENST00000636058 SIRT2Q8IXJ6 389 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms