RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 NAA30Q147X3 362 aaPredicted RBP10.46□□□□□ -0.73
SMARCA2-244ENST00000635659 CC2D2BQ6DHV5 1058 aa10.46□□□□□ -0.73
SMARCA2-244ENST00000635659 SCG3Q8WXD2 468 aaKnown RBP10.46□□□□□ -0.73
SMARCA2-244ENST00000635659 TRIM52Q96A61 297 aa10.46□□□□□ -0.73
SMARCA2-244ENST00000635659 KRTAP3-3Q9BYR6 98 aa10.46□□□□□ -0.73
SMARCA2-244ENST00000635659 KRTAP3-2Q9BYR7 98 aa10.46□□□□□ -0.73
SMARCA2-244ENST00000635659 ESF1Q9H501 851 aaKnown RBP10.46□□□□□ -0.73
SMARCA2-244ENST00000635659 ADGBQ8N7X0 1667 aa10.45□□□□□ -0.74
SMARCA2-244ENST00000635659 AGLP35573 1532 aa10.45□□□□□ -0.74
SMARCA2-244ENST00000635659 ATP7AQ04656 1500 aa10.45□□□□□ -0.74
SMARCA2-244ENST00000635659 MTUS2Q5JR59 1369 aa10.45□□□□□ -0.74
SMARCA2-244ENST00000635659 VARSP26640 1264 aaKnown RBP10.45□□□□□ -0.74
SMARCA2-244ENST00000635659 GDF10P55107 478 aa10.45□□□□□ -0.74
SMARCA2-244ENST00000635659 VASH1Q7L8A9 365 aaPredicted RBP10.45□□□□□ -0.74
SMARCA2-244ENST00000635659 MAP3K1Q13233 1512 aa10.44□□□□□ -0.74
SMARCA2-244ENST00000635659 NCOA2Q15596 1464 aa10.44□□□□□ -0.74
SMARCA2-244ENST00000635659 EPHA4P54764 986 aa10.44□□□□□ -0.74
SMARCA2-244ENST00000635659 TMC7Q7Z402 723 aa10.44□□□□□ -0.74
SMARCA2-244ENST00000635659 OSBPL3Q9H4L5 887 aa10.44□□□□□ -0.74
SMARCA2-244ENST00000635659 PLEKHH2Q8IVE3 1493 aa10.43□□□□□ -0.74
SMARCA2-244ENST00000635659 LMTK3Q96Q04 1460 aa10.43□□□□□ -0.74
SMARCA2-244ENST00000635659 KIAA1107Q9UPP5 1409 aa10.43□□□□□ -0.74
SMARCA2-244ENST00000635659 ATAD2Q6PL18 1390 aa10.43□□□□□ -0.74
SMARCA2-244ENST00000635659 NDUFB5O43674 189 aa10.43□□□□□ -0.74
SMARCA2-244ENST00000635659 TNS4Q8IZW8 715 aa10.43□□□□□ -0.74
SMARCA2-244ENST00000635659 NKX2-3Q8TAU0 364 aa10.43□□□□□ -0.74
SMARCA2-244ENST00000635659 VTI1AQ96AJ9 217 aa10.43□□□□□ -0.74
SMARCA2-244ENST00000635659 C3P01024 1663 aa10.43□□□□□ -0.74
SMARCA2-244ENST00000635659 PREX1Q8TCU6 1659 aa10.42□□□□□ -0.74
SMARCA2-244ENST00000635659 P4HBP07237 508 aaKnown RBP10.42□□□□□ -0.74
SMARCA2-244ENST00000635659 MPSTP25325 297 aa10.42□□□□□ -0.74
SMARCA2-244ENST00000635659 AFAP1Q8N556 730 aa10.42□□□□□ -0.74
SMARCA2-244ENST00000635659 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.42□□□□□ -0.74
SMARCA2-244ENST00000635659 LRRC9Q6ZRR7 1453 aa10.42□□□□□ -0.74
SMARCA2-244ENST00000635659 MBD5Q9P267 1494 aa10.42□□□□□ -0.74
SMARCA2-244ENST00000635659 CCNB3Q8WWL7 1395 aa10.41□□□□□ -0.74
SMARCA2-244ENST00000635659 MROH2AA6NES4 1674 aa10.41□□□□□ -0.74
SMARCA2-244ENST00000635659 ZBTB24O43167 697 aaPredicted RBP10.41□□□□□ -0.74
SMARCA2-244ENST00000635659 INHAP05111 366 aa10.41□□□□□ -0.74
SMARCA2-244ENST00000635659 WNT7BP56706 349 aa10.41□□□□□ -0.74
SMARCA2-244ENST00000635659 ZC3H6P61129 1189 aaKnown RBP10.41□□□□□ -0.74
SMARCA2-244ENST00000635659 TRIM32Q13049 653 aa10.41□□□□□ -0.74
SMARCA2-244ENST00000635659 C16orf46Q6P387 395 aa10.41□□□□□ -0.74
SMARCA2-244ENST00000635659 CITED4Q96RK1 184 aa10.41□□□□□ -0.74
SMARCA2-244ENST00000635659 TSPAN10Q9H1Z9 355 aaPredicted RBP10.41□□□□□ -0.74
SMARCA2-244ENST00000635659 CAMSAP2Q08AD1 1489 aa10.41□□□□□ -0.74
SMARCA2-244ENST00000635659 TREHO43280 583 aa10.4□□□□□ -0.74
SMARCA2-244ENST00000635659 FMR1Q06787 632 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMARCA2-244ENST00000635659 DHX9Q08211 1270 aaKnown RBP10.4□□□□□ -0.74
SMARCA2-244ENST00000635659 MRPL58Q14197 206 aaKnown RBP10.4□□□□□ -0.74
SMARCA2-244ENST00000635659 TSNAXIP1Q2TAA8 658 aa10.4□□□□□ -0.74
SMARCA2-244ENST00000635659 SLC4A9Q96Q91 983 aa10.4□□□□□ -0.74
SMARCA2-244ENST00000635659 BRPF3Q9ULD4 1205 aa10.4□□□□□ -0.74
SMARCA2-244ENST00000635659 ARHGEF5Q12774 1597 aa10.39□□□□□ -0.75
SMARCA2-244ENST00000635659 ARID4BQ4LE39 1312 aaPredicted RBP10.39□□□□□ -0.75
SMARCA2-244ENST00000635659 CROCC2H7BZ55 1655 aa10.39□□□□□ -0.75
SMARCA2-244ENST00000635659 STAG2Q8N3U4 1231 aa10.39□□□□□ -0.75
SMARCA2-244ENST00000635659 SREK1Q8WXA9 508 aaKnown RBP10.39□□□□□ -0.75
SMARCA2-244ENST00000635659 ETNK1Q9HBU6 452 aa10.39□□□□□ -0.75
SMARCA2-244ENST00000635659 STAU1O95793 577 aaKnown RBP10.38□□□□□ -0.75
SMARCA2-244ENST00000635659 SKOR1P84550 965 aa10.38□□□□□ -0.75
SMARCA2-244ENST00000635659 FGD1P98174 961 aa10.38□□□□□ -0.75
SMARCA2-244ENST00000635659 ALKBH2Q6NS38 261 aa10.38□□□□□ -0.75
SMARCA2-244ENST00000635659 CDK15Q96Q40 435 aa10.38□□□□□ -0.75
SMARCA2-244ENST00000635659 SAP130Q9H0E3 1048 aa10.38□□□□□ -0.75
SMARCA2-244ENST00000635659 CYLDQ9NQC7 956 aa10.38□□□□□ -0.75
SMARCA2-244ENST00000635659 SETD1BQ9UPS6 1966 aaKnown RBP10.37□□□□□ -0.75
SMARCA2-244ENST00000635659 PPP1R12BO60237 982 aaPredicted RBP10.37□□□□□ -0.75
SMARCA2-244ENST00000635659 PTPN5P54829 565 aa10.37□□□□□ -0.75
SMARCA2-244ENST00000635659 FOXK2Q01167 660 aa10.37□□□□□ -0.75
SMARCA2-244ENST00000635659 CYP2U1Q7Z449 544 aa10.37□□□□□ -0.75
SMARCA2-244ENST00000635659 DRC1Q96MC2 740 aa10.37□□□□□ -0.75
SMARCA2-244ENST00000635659 SERTAD1Q9UHV2 236 aa10.37□□□□□ -0.75
SMARCA2-244ENST00000635659 CLTCQ00610 1675 aaKnown RBP10.37□□□□□ -0.75
SMARCA2-244ENST00000635659 CCDC141Q6ZP82 1450 aa10.36□□□□□ -0.75
SMARCA2-244ENST00000635659 MAST1Q9Y2H9 1570 aa10.36□□□□□ -0.75
SMARCA2-244ENST00000635659 A0A1W2PRU2 124 aa10.36□□□□□ -0.75
SMARCA2-244ENST00000635659 FSHRP23945 695 aa10.36□□□□□ -0.75
SMARCA2-244ENST00000635659 EIF1AXP47813 144 aaKnown RBP10.36□□□□□ -0.75
SMARCA2-244ENST00000635659 DMRTB1Q96MA1 342 aa10.36□□□□□ -0.75
SMARCA2-244ENST00000635659 BACH2Q9BYV9 841 aa10.36□□□□□ -0.75
SMARCA2-244ENST00000635659 PRKD2Q9BZL6 878 aa10.36□□□□□ -0.75
SMARCA2-244ENST00000635659 TMPRSS4Q9NRS4 437 aa10.36□□□□□ -0.75
SMARCA2-244ENST00000635659 CFDP1Q9UEE9 299 aaPredicted RBP10.36□□□□□ -0.75
SMARCA2-244ENST00000635659 ZNF644Q9H582 1327 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-244ENST00000635659 PPEF1O14829 653 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-244ENST00000635659 GNRH1P01148 92 aa10.35□□□□□ -0.75
SMARCA2-244ENST00000635659 DSC3Q14574 896 aa10.35□□□□□ -0.75
SMARCA2-244ENST00000635659 ESCO1Q5FWF5 840 aa10.35□□□□□ -0.75
SMARCA2-244ENST00000635659 SLC9A9Q8IVB4 645 aa10.35□□□□□ -0.75
SMARCA2-244ENST00000635659 ZNF784Q8NCA9 323 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-244ENST00000635659 C2orf49Q9BVC5 232 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-244ENST00000635659 SCHIP1Q9P0W5 487 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-244ENST00000635659 STIM2Q9P246 746 aa10.35□□□□□ -0.75
SMARCA2-244ENST00000635659 A2MP01023 1474 aa10.35□□□□□ -0.75
SMARCA2-244ENST00000635659 TNFRSF10BO14763 440 aa10.34□□□□□ -0.75
SMARCA2-244ENST00000635659 SCAMP3O14828 347 aaKnown RBP10.34□□□□□ -0.75
SMARCA2-244ENST00000635659 FZD6O60353 706 aa10.34□□□□□ -0.75
SMARCA2-244ENST00000635659 MTFR1Q15390 333 aa10.34□□□□□ -0.75
SMARCA2-244ENST00000635659 MPNDQ8N594 471 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms