RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 CCDC39Q9UFE4 941 aa12.88□□□□□ -0.35
PSPC1-207ENST00000635251 HDAC5Q9UQL6 1122 aa12.88□□□□□ -0.35
PSPC1-207ENST00000635251 RPAP1Q9BWH6 1393 aaPredicted RBP12.88□□□□□ -0.35
PSPC1-207ENST00000635251 KDM3BQ7LBC6 1761 aa12.88□□□□□ -0.35
PSPC1-207ENST00000635251 ALDH1L1O75891 902 aa12.88□□□□□ -0.35
PSPC1-207ENST00000635251 USP42Q9H9J4 1324 aaKnown RBP12.88□□□□□ -0.35
PSPC1-207ENST00000635251 NFAT5O94916 1531 aa12.88□□□□□ -0.35
PSPC1-207ENST00000635251 PTMAP06454 111 aaKnown RBP12.87□□□□□ -0.35
PSPC1-207ENST00000635251 ZSCAN22P10073 491 aaPredicted RBP12.87□□□□□ -0.35
PSPC1-207ENST00000635251 CPA1P15085 419 aa12.87□□□□□ -0.35
PSPC1-207ENST00000635251 HSP90AA2PQ14568 343 aaPredicted RBP12.87□□□□□ -0.35
PSPC1-207ENST00000635251 LMOD2Q6P5Q4 547 aa12.87□□□□□ -0.35
PSPC1-207ENST00000635251 RUFY3Q7L099 469 aa12.87□□□□□ -0.35
PSPC1-207ENST00000635251 ERC1Q8IUD2 1116 aa12.87□□□□□ -0.35
PSPC1-207ENST00000635251 PA2G4Q9UQ80 394 aaKnown RBP12.87□□□□□ -0.35
PSPC1-207ENST00000635251 CNPY2Q9Y2B0 182 aa12.87□□□□□ -0.35
PSPC1-207ENST00000635251 STX6O43752 255 aa12.87□□□□□ -0.35
PSPC1-207ENST00000635251 MTX1Q13505 466 aa12.87□□□□□ -0.35
PSPC1-207ENST00000635251 CWF19L2Q2TBE0 894 aaKnown RBP12.87□□□□□ -0.35
PSPC1-207ENST00000635251 PRPF40BQ6NWY9 871 aaKnown RBP12.87□□□□□ -0.35
PSPC1-207ENST00000635251 KSR2Q6VAB6 950 aa12.87□□□□□ -0.35
PSPC1-207ENST00000635251 PROSER3Q2NL68 480 aa12.86□□□□□ -0.35
PSPC1-207ENST00000635251 AACSQ86V21 672 aa12.86□□□□□ -0.35
PSPC1-207ENST00000635251 JAKMIP1Q96N16 626 aaKnown RBP12.86□□□□□ -0.35
PSPC1-207ENST00000635251 PDRG1Q9NUG6 133 aa12.86□□□□□ -0.35
PSPC1-207ENST00000635251 SETD1BQ9UPS6 1966 aaKnown RBP12.86□□□□□ -0.35
PSPC1-207ENST00000635251 ZKSCAN5Q9Y2L8 839 aa12.86□□□□□ -0.35
PSPC1-207ENST00000635251 GIGYF1O75420 1035 aaPredicted RBP12.86□□□□□ -0.35
PSPC1-207ENST00000635251 SYT1P21579 422 aa12.86□□□□□ -0.35
PSPC1-207ENST00000635251 PTH1RQ03431 593 aa12.86□□□□□ -0.35
PSPC1-207ENST00000635251 CCDC83Q8IWF9 413 aa12.86□□□□□ -0.35
PSPC1-207ENST00000635251 ATP6V1DQ9Y5K8 247 aa12.86□□□□□ -0.35
PSPC1-207ENST00000635251 ADGRL3Q9HAR2 1447 aa12.85□□□□□ -0.35
PSPC1-207ENST00000635251 ZNF500O60304 480 aaPredicted RBP12.85□□□□□ -0.35
PSPC1-207ENST00000635251 KCNJ4P48050 445 aa12.85□□□□□ -0.35
PSPC1-207ENST00000635251 XPCQ01831 940 aaPredicted RBP12.85□□□□□ -0.35
PSPC1-207ENST00000635251 ANKLE2Q86XL3 938 aa12.85□□□□□ -0.35
PSPC1-207ENST00000635251 EVI5LQ96CN4 794 aa12.85□□□□□ -0.35
PSPC1-207ENST00000635251 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.85□□□□□ -0.35
PSPC1-207ENST00000635251 CYP46A1Q9Y6A2 500 aa12.85□□□□□ -0.35
PSPC1-207ENST00000635251 LMO7Q8WWI1 1683 aa12.85□□□□□ -0.35
PSPC1-207ENST00000635251 PRAMEF22A3QJZ6 481 aa12.85□□□□□ -0.35
PSPC1-207ENST00000635251 RRP9O43818 475 aaKnown RBP12.85□□□□□ -0.35
PSPC1-207ENST00000635251 DDX58O95786 925 aaKnown RBP12.85□□□□□ -0.35
PSPC1-207ENST00000635251 F13A1P00488 732 aa12.85□□□□□ -0.35
PSPC1-207ENST00000635251 AIMP1Q12904 312 aaKnown RBP12.85□□□□□ -0.35
PSPC1-207ENST00000635251 G3BP1Q13283 466 aaKnown RBP eCLIP12.85□□□□□ -0.35
PSPC1-207ENST00000635251 CCDC183Q5T5S1 534 aa12.85□□□□□ -0.35
PSPC1-207ENST00000635251 TMEM87AQ8NBN3 555 aa12.85□□□□□ -0.35
PSPC1-207ENST00000635251 ANKRD24Q8TF21 1146 aa12.85□□□□□ -0.35
PSPC1-207ENST00000635251 UBE2Q2Q8WVN8 375 aa12.85□□□□□ -0.35
PSPC1-207ENST00000635251 R3HCC1Q9Y3T6 440 aaKnown RBP12.85□□□□□ -0.35
PSPC1-207ENST00000635251 FIBPO43427 364 aa12.84□□□□□ -0.35
PSPC1-207ENST00000635251 LARGE1O95461 756 aa12.84□□□□□ -0.35
PSPC1-207ENST00000635251 GCP02774 474 aa12.84□□□□□ -0.35
PSPC1-207ENST00000635251 ZKSCAN1P17029 563 aaPredicted RBP12.84□□□□□ -0.35
PSPC1-207ENST00000635251 GJB2P29033 226 aa12.84□□□□□ -0.35
PSPC1-207ENST00000635251 MCM5P33992 734 aa12.84□□□□□ -0.35
PSPC1-207ENST00000635251 ADCK5Q3MIX3 580 aa12.84□□□□□ -0.35
PSPC1-207ENST00000635251 ZSCAN31Q96LW9 406 aaPredicted RBP12.84□□□□□ -0.35
PSPC1-207ENST00000635251 HYPKQ9NX55 129 aa12.84□□□□□ -0.35
PSPC1-207ENST00000635251 RGPD2P0DJD1 1756 aa12.84□□□□□ -0.35
PSPC1-207ENST00000635251 NCAPD2Q15021 1401 aa12.84□□□□□ -0.35
PSPC1-207ENST00000635251 LETM1O95202 739 aaPredicted RBP12.83□□□□□ -0.35
PSPC1-207ENST00000635251 UBE2HP62256 183 aa12.83□□□□□ -0.35
PSPC1-207ENST00000635251 VPS53Q5VIR6 699 aa12.83□□□□□ -0.35
PSPC1-207ENST00000635251 PXDNQ92626 1479 aa12.83□□□□□ -0.36
PSPC1-207ENST00000635251 GRM8O00222 908 aa12.83□□□□□ -0.36
PSPC1-207ENST00000635251 CSPP1Q1MSJ5 1256 aa12.83□□□□□ -0.36
PSPC1-207ENST00000635251 FAM184AQ8NB25 1140 aa12.83□□□□□ -0.36
PSPC1-207ENST00000635251 LINS1Q8NG48 757 aa12.83□□□□□ -0.36
PSPC1-207ENST00000635251 DDX54Q8TDD1 881 aaKnown RBP12.83□□□□□ -0.36
PSPC1-207ENST00000635251 SUCLG2Q96I99 432 aa12.83□□□□□ -0.36
PSPC1-207ENST00000635251 SH2B1Q9NRF2 756 aaPredicted RBP12.83□□□□□ -0.36
PSPC1-207ENST00000635251 CCDC171Q6TFL3 1326 aa12.82□□□□□ -0.36
PSPC1-207ENST00000635251 HIP1O00291 1037 aa12.82□□□□□ -0.36
PSPC1-207ENST00000635251 ARHGEF25Q86VW2 580 aa12.82□□□□□ -0.36
PSPC1-207ENST00000635251 CCDC8Q9H0W5 538 aaPredicted RBP12.82□□□□□ -0.36
PSPC1-207ENST00000635251 CRYBG1Q9Y4K1 1723 aa12.82□□□□□ -0.36
PSPC1-207ENST00000635251 VPS37CA5D8V6 355 aaPredicted RBP12.82□□□□□ -0.36
PSPC1-207ENST00000635251 TM6SF1Q9BZW5 370 aa12.82□□□□□ -0.36
PSPC1-207ENST00000635251 SIL1Q9H173 461 aa12.82□□□□□ -0.36
PSPC1-207ENST00000635251 BICC1Q9H694 974 aaKnown RBP12.82□□□□□ -0.36
PSPC1-207ENST00000635251 ZSWIM6Q9HCJ5 1215 aa12.82□□□□□ -0.36
PSPC1-207ENST00000635251 RBM8AQ9Y5S9 174 aaKnown RBP12.82□□□□□ -0.36
PSPC1-207ENST00000635251 DTNBO60941 627 aa12.81□□□□□ -0.36
PSPC1-207ENST00000635251 UVSSAQ2YD98 709 aa12.81□□□□□ -0.36
PSPC1-207ENST00000635251 RIC3Q7Z5B4 369 aa12.81□□□□□ -0.36
PSPC1-207ENST00000635251 SASH1O94885 1247 aa12.81□□□□□ -0.36
PSPC1-207ENST00000635251 NMIQ13287 307 aaPredicted RBP12.81□□□□□ -0.36
PSPC1-207ENST00000635251 NECTIN1Q15223 517 aa12.81□□□□□ -0.36
PSPC1-207ENST00000635251 GLIPR1L2Q4G1C9 344 aa12.81□□□□□ -0.36
PSPC1-207ENST00000635251 FAM227BQ96M60 508 aa12.81□□□□□ -0.36
PSPC1-207ENST00000635251 ORAI2Q96SN7 254 aa12.81□□□□□ -0.36
PSPC1-207ENST00000635251 FSD1Q9BTV5 496 aa12.81□□□□□ -0.36
PSPC1-207ENST00000635251 DDX21Q9NR30 783 aaKnown RBP eCLIP12.81□□□□□ -0.36
PSPC1-207ENST00000635251 PODXL2Q9NZ53 605 aa12.81□□□□□ -0.36
PSPC1-207ENST00000635251 OVOS2A0A0G2JMS6 1433 aa12.8□□□□□ -0.36
PSPC1-207ENST00000635251 PSMA5P28066 241 aa12.8□□□□□ -0.36
PSPC1-207ENST00000635251 TERF1P54274 439 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms