RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 EMILIN1Q9Y6C2 1016 aa13.49□□□□□ -0.25
COL11A1-211ENST00000635193 CNPY2Q9Y2B0 182 aa13.49□□□□□ -0.25
COL11A1-211ENST00000635193 PIBF1Q8WXW3 757 aa13.49□□□□□ -0.25
COL11A1-211ENST00000635193 ECHDC1Q9NTX5 307 aa13.49□□□□□ -0.25
COL11A1-211ENST00000635193 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
COL11A1-211ENST00000635193 SMC5Q8IY18 1101 aa13.48□□□□□ -0.25
COL11A1-211ENST00000635193 MICALL1Q8N3F8 863 aa13.48□□□□□ -0.25
COL11A1-211ENST00000635193 SPINK5Q9NQ38 1064 aaPredicted RBP13.48□□□□□ -0.25
COL11A1-211ENST00000635193 NSD2O96028 1365 aa13.48□□□□□ -0.25
COL11A1-211ENST00000635193 SLU7O95391 586 aaKnown RBP13.48□□□□□ -0.25
COL11A1-211ENST00000635193 FKBP15Q5T1M5 1219 aa13.48□□□□□ -0.25
COL11A1-211ENST00000635193 CCDC186Q7Z3E2 898 aa13.48□□□□□ -0.25
COL11A1-211ENST00000635193 CCDC12Q8WUD4 166 aaPredicted RBP13.48□□□□□ -0.25
COL11A1-211ENST00000635193 ZSWIM4Q9H7M6 989 aa13.48□□□□□ -0.25
COL11A1-211ENST00000635193 IFIT1P09914 478 aaKnown RBP13.48□□□□□ -0.25
COL11A1-211ENST00000635193 FLIIQ13045 1269 aa13.48□□□□□ -0.25
COL11A1-211ENST00000635193 LARP1Q6PKG0 1096 aaKnown RBP13.48□□□□□ -0.25
COL11A1-211ENST00000635193 FAM200AQ8TCP9 573 aa13.48□□□□□ -0.25
COL11A1-211ENST00000635193 TTC12Q9H892 705 aaPredicted RBP13.48□□□□□ -0.25
COL11A1-211ENST00000635193 MBIPQ9NS73 344 aa13.48□□□□□ -0.25
COL11A1-211ENST00000635193 YEATS4O95619 227 aa13.48□□□□□ -0.25
COL11A1-211ENST00000635193 CAPN2P17655 700 aa13.48□□□□□ -0.25
COL11A1-211ENST00000635193 ATP2B2Q01814 1243 aa13.48□□□□□ -0.25
COL11A1-211ENST00000635193 HSPA4P34932 840 aa13.48□□□□□ -0.25
COL11A1-211ENST00000635193 CCDC91Q7Z6B0 441 aa13.48□□□□□ -0.25
COL11A1-211ENST00000635193 ANO6Q4KMQ2 910 aa13.47□□□□□ -0.25
COL11A1-211ENST00000635193 SPECC1LQ69YQ0 1117 aa13.47□□□□□ -0.25
COL11A1-211ENST00000635193 GIGYF2Q6Y7W6 1299 aaKnown RBP13.47□□□□□ -0.25
COL11A1-211ENST00000635193 C10orf67Q8IYJ2 551 aa13.47□□□□□ -0.25
COL11A1-211ENST00000635193 ARHGAP45Q92619 1136 aa13.47□□□□□ -0.25
COL11A1-211ENST00000635193 SKILP12757 684 aa13.47□□□□□ -0.25
COL11A1-211ENST00000635193 NME9Q86XW9 330 aa13.47□□□□□ -0.25
COL11A1-211ENST00000635193 LRP2BPQ9P2M1 347 aa13.47□□□□□ -0.25
COL11A1-211ENST00000635193 AKAP2Q9Y2D5 859 aa13.47□□□□□ -0.25
COL11A1-211ENST00000635193 GOLGA8BA8MQT2 603 aa13.47□□□□□ -0.25
COL11A1-211ENST00000635193 CCDC85AQ96PX6 553 aaPredicted RBP13.47□□□□□ -0.25
COL11A1-211ENST00000635193 CCDC196A0A1B0GTZ2 297 aa13.47□□□□□ -0.25
COL11A1-211ENST00000635193 GCOM1H8Y6P7 765 aaPredicted RBP13.47□□□□□ -0.25
COL11A1-211ENST00000635193 MYZAPP0CAP1 466 aa13.47□□□□□ -0.25
COL11A1-211ENST00000635193 PHAXQ9H814 394 aaKnown RBP13.47□□□□□ -0.25
COL11A1-211ENST00000635193 USO1O60763 962 aaKnown RBP13.46□□□□□ -0.25
COL11A1-211ENST00000635193 SPECC1Q5M775 1068 aa13.46□□□□□ -0.25
COL11A1-211ENST00000635193 LIG1P18858 919 aa13.46□□□□□ -0.25
COL11A1-211ENST00000635193 MCM6Q14566 821 aa13.46□□□□□ -0.25
COL11A1-211ENST00000635193 ADGRF5Q8IZF2 1346 aa13.46□□□□□ -0.25
COL11A1-211ENST00000635193 ZSCAN16Q9H4T2 348 aaPredicted RBP13.46□□□□□ -0.26
COL11A1-211ENST00000635193 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.46□□□□□ -0.26
COL11A1-211ENST00000635193 V9GYY5 206 aaPredicted RBP13.46□□□□□ -0.26
COL11A1-211ENST00000635193 MEX3CQ5U5Q3 659 aaKnown RBP13.46□□□□□ -0.26
COL11A1-211ENST00000635193 NAA15Q9BXJ9 866 aaKnown RBP13.46□□□□□ -0.26
COL11A1-211ENST00000635193 PEG3Q9GZU2 1588 aa13.45□□□□□ -0.26
COL11A1-211ENST00000635193 ANAPC15P60006 121 aa13.45□□□□□ -0.26
COL11A1-211ENST00000635193 CACNA2D4Q7Z3S7 1137 aa13.45□□□□□ -0.26
COL11A1-211ENST00000635193 MYD88Q99836 296 aa13.45□□□□□ -0.26
COL11A1-211ENST00000635193 ZNF213O14771 459 aa13.45□□□□□ -0.26
COL11A1-211ENST00000635193 METTL24Q5JXM2 366 aa13.45□□□□□ -0.26
COL11A1-211ENST00000635193 DNAI1Q9UI46 699 aa13.45□□□□□ -0.26
COL11A1-211ENST00000635193 PARD3Q8TEW0 1356 aa13.45□□□□□ -0.26
COL11A1-211ENST00000635193 FAM135AQ9P2D6 1515 aa13.45□□□□□ -0.26
COL11A1-211ENST00000635193 NEK1Q96PY6 1258 aa13.45□□□□□ -0.26
COL11A1-211ENST00000635193 SRRTQ9BXP5 876 aaKnown RBP13.45□□□□□ -0.26
COL11A1-211ENST00000635193 MAGI1Q96QZ7 1491 aaPredicted RBP13.45□□□□□ -0.26
COL11A1-211ENST00000635193 HLTFQ14527 1009 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL11A1-211ENST00000635193 MAATS1Q7Z4T9 603 aa13.45□□□□□ -0.26
COL11A1-211ENST00000635193 HMG20BQ9P0W2 317 aa13.45□□□□□ -0.26
COL11A1-211ENST00000635193 RALGAPBQ86X10 1494 aa13.44□□□□□ -0.26
COL11A1-211ENST00000635193 SEC24BO95487 1268 aa13.44□□□□□ -0.26
COL11A1-211ENST00000635193 CCDC178Q5BJE1 867 aa13.44□□□□□ -0.26
COL11A1-211ENST00000635193 WAPLQ7Z5K2 1190 aa13.44□□□□□ -0.26
COL11A1-211ENST00000635193 SLC12A7Q9Y666 1083 aa13.44□□□□□ -0.26
COL11A1-211ENST00000635193 SSRP1Q08945 709 aaKnown RBP13.44□□□□□ -0.26
COL11A1-211ENST00000635193 ISM2Q6H9L7 571 aa13.44□□□□□ -0.26
COL11A1-211ENST00000635193 ESYT1Q9BSJ8 1104 aa13.44□□□□□ -0.26
COL11A1-211ENST00000635193 GOPCQ9HD26 462 aa13.44□□□□□ -0.26
COL11A1-211ENST00000635193 NECAB1Q8N987 351 aa13.44□□□□□ -0.26
COL11A1-211ENST00000635193 NAPBQ9H115 298 aa13.44□□□□□ -0.26
COL11A1-211ENST00000635193 STRN4Q9NRL3 753 aa13.44□□□□□ -0.26
COL11A1-211ENST00000635193 TUBB4AP04350 444 aa13.44□□□□□ -0.26
COL11A1-211ENST00000635193 GOLGA8AA7E2F4 631 aa13.43□□□□□ -0.26
COL11A1-211ENST00000635193 F13A1P00488 732 aa13.43□□□□□ -0.26
COL11A1-211ENST00000635193 POLR3DP05423 398 aaPredicted RBP13.43□□□□□ -0.26
COL11A1-211ENST00000635193 PDE1AP54750 535 aa13.43□□□□□ -0.26
COL11A1-211ENST00000635193 PPP1R42Q7Z4L9 355 aa13.43□□□□□ -0.26
COL11A1-211ENST00000635193 IQGAP2Q13576 1575 aa13.43□□□□□ -0.26
COL11A1-211ENST00000635193 URB2Q14146 1524 aaKnown RBP13.43□□□□□ -0.26
COL11A1-211ENST00000635193 HSF2BPO75031 334 aa13.43□□□□□ -0.26
COL11A1-211ENST00000635193 TMEM132AQ24JP5 1023 aa13.43□□□□□ -0.26
COL11A1-211ENST00000635193 CCDC82Q8N4S0 544 aa13.43□□□□□ -0.26
COL11A1-211ENST00000635193 ATP2C2O75185 946 aa13.43□□□□□ -0.26
COL11A1-211ENST00000635193 EBAG9O00559 213 aa13.43□□□□□ -0.26
COL11A1-211ENST00000635193 DNA2P51530 1060 aa13.43□□□□□ -0.26
COL11A1-211ENST00000635193 CEP112Q8N8E3 955 aa13.43□□□□□ -0.26
COL11A1-211ENST00000635193 USP16Q9Y5T5 823 aa13.43□□□□□ -0.26
COL11A1-211ENST00000635193 A0A1B0GUL7 405 aa13.42□□□□□ -0.26
COL11A1-211ENST00000635193 TOM1L2Q6ZVM7 507 aa13.42□□□□□ -0.26
COL11A1-211ENST00000635193 ALS2CR12Q96Q35 445 aa13.42□□□□□ -0.26
COL11A1-211ENST00000635193 TSG101Q99816 390 aa13.42□□□□□ -0.26
COL11A1-211ENST00000635193 DACT1Q9NYF0 836 aa13.42□□□□□ -0.26
COL11A1-211ENST00000635193 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.42□□□□□ -0.26
COL11A1-211ENST00000635193 CCDC102BQ68D86 513 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms