RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 PLCH2O75038 1416 aa24.39■■□□□ 1.5
SMARCA2-227ENST00000634760 USHBP1Q8N6Y0 703 aa24.39■■□□□ 1.5
SMARCA2-227ENST00000634760 POTEB2H3BUK9 544 aa24.39■■□□□ 1.49
SMARCA2-227ENST00000634760 MATR3P43243 847 aaKnown RBP eCLIP24.39■■□□□ 1.49
SMARCA2-227ENST00000634760 KIF18AQ8NI77 898 aa24.39■■□□□ 1.49
SMARCA2-227ENST00000634760 UQCRFS1P1P0C7P4 283 aa24.39■■□□□ 1.49
SMARCA2-227ENST00000634760 KIF5BP33176 963 aa24.39■■□□□ 1.49
SMARCA2-227ENST00000634760 NUCB1Q02818 461 aa24.39■■□□□ 1.49
SMARCA2-227ENST00000634760 PPP4R3AQ6IN85 833 aa24.38■■□□□ 1.49
SMARCA2-227ENST00000634760 CCDC85AQ96PX6 553 aaPredicted RBP24.38■■□□□ 1.49
SMARCA2-227ENST00000634760 CDC5LQ99459 802 aaKnown RBP24.38■■□□□ 1.49
SMARCA2-227ENST00000634760 AMPD3Q01432 767 aa24.38■■□□□ 1.49
SMARCA2-227ENST00000634760 SPTY2D1Q68D10 685 aaPredicted RBP24.38■■□□□ 1.49
SMARCA2-227ENST00000634760 CLIP2Q9UDT6 1046 aa24.38■■□□□ 1.49
SMARCA2-227ENST00000634760 TNRQ92752 1358 aa24.38■■□□□ 1.49
SMARCA2-227ENST00000634760 LDHCP07864 332 aa24.38■■□□□ 1.49
SMARCA2-227ENST00000634760 TMCO3Q6UWJ1 677 aa24.38■■□□□ 1.49
SMARCA2-227ENST00000634760 TEX14Q8IWB6 1497 aa24.38■■□□□ 1.49
SMARCA2-227ENST00000634760 PTCD1O75127 700 aaKnown RBP24.37■■□□□ 1.49
SMARCA2-227ENST00000634760 USP8P40818 1118 aa24.37■■□□□ 1.49
SMARCA2-227ENST00000634760 LRRC27Q9C0I9 530 aa24.37■■□□□ 1.49
SMARCA2-227ENST00000634760 ANKIB1Q9P2G1 1089 aa24.37■■□□□ 1.49
SMARCA2-227ENST00000634760 GOLGA6L9A6NEM1 432 aa24.37■■□□□ 1.49
SMARCA2-227ENST00000634760 IFIT3O14879 490 aaKnown RBP24.37■■□□□ 1.49
SMARCA2-227ENST00000634760 CALRP27797 417 aaKnown RBP24.37■■□□□ 1.49
SMARCA2-227ENST00000634760 FERMT3Q86UX7 667 aa24.37■■□□□ 1.49
SMARCA2-227ENST00000634760 CCDC178Q5BJE1 867 aa24.37■■□□□ 1.49
SMARCA2-227ENST00000634760 ZSCAN16Q9H4T2 348 aaPredicted RBP24.37■■□□□ 1.49
SMARCA2-227ENST00000634760 BAG4O95429 457 aaKnown RBP24.37■■□□□ 1.49
SMARCA2-227ENST00000634760 EZRP15311 586 aaKnown RBP24.37■■□□□ 1.49
SMARCA2-227ENST00000634760 GJB2P29033 226 aa24.37■■□□□ 1.49
SMARCA2-227ENST00000634760 FAM114A1Q8IWE2 563 aa24.37■■□□□ 1.49
SMARCA2-227ENST00000634760 STX6O43752 255 aa24.36■■□□□ 1.49
SMARCA2-227ENST00000634760 ENOX2Q16206 610 aaKnown RBP24.36■■□□□ 1.49
SMARCA2-227ENST00000634760 CCDC194A0A1B0GVG4 234 aa24.36■■□□□ 1.49
SMARCA2-227ENST00000634760 CNNM3Q8NE01 707 aa24.36■■□□□ 1.49
SMARCA2-227ENST00000634760 SSFA2P28290 1259 aa24.36■■□□□ 1.49
SMARCA2-227ENST00000634760 TBC1D32Q96NH3 1257 aa24.36■■□□□ 1.49
SMARCA2-227ENST00000634760 TCOF1Q13428 1488 aaKnown RBP24.36■■□□□ 1.49
SMARCA2-227ENST00000634760 YEATS4O95619 227 aa24.36■■□□□ 1.49
SMARCA2-227ENST00000634760 KRT28Q7Z3Y7 464 aa24.36■■□□□ 1.49
SMARCA2-227ENST00000634760 USO1O60763 962 aaKnown RBP24.36■■□□□ 1.49
SMARCA2-227ENST00000634760 SNRPA1P09661 255 aaKnown RBP24.36■■□□□ 1.49
SMARCA2-227ENST00000634760 RPGRQ92834 1020 aaKnown RBP24.35■■□□□ 1.49
SMARCA2-227ENST00000634760 PPP1R42Q7Z4L9 355 aa24.35■■□□□ 1.49
SMARCA2-227ENST00000634760 NLRP5P59047 1200 aa24.35■■□□□ 1.49
SMARCA2-227ENST00000634760 PAF1Q8N7H5 531 aa24.35■■□□□ 1.49
SMARCA2-227ENST00000634760 NCOA7Q8NI08 942 aa24.35■■□□□ 1.49
SMARCA2-227ENST00000634760 CGNQ9P2M7 1197 aaKnown RBP24.34■■□□□ 1.49
SMARCA2-227ENST00000634760 TAF3Q5VWG9 929 aa24.34■■□□□ 1.49
SMARCA2-227ENST00000634760 RANBP6O60518 1105 aaKnown RBP24.34■■□□□ 1.49
SMARCA2-227ENST00000634760 NEK1Q96PY6 1258 aa24.34■■□□□ 1.49
SMARCA2-227ENST00000634760 ZFYP08048 801 aaPredicted RBP24.34■■□□□ 1.49
SMARCA2-227ENST00000634760 ANAPC15P60006 121 aa24.34■■□□□ 1.49
SMARCA2-227ENST00000634760 ACEP12821 1306 aa24.34■■□□□ 1.49
SMARCA2-227ENST00000634760 CACNA2D4Q7Z3S7 1137 aa24.34■■□□□ 1.49
SMARCA2-227ENST00000634760 UBE2HP62256 183 aa24.33■■□□□ 1.49
SMARCA2-227ENST00000634760 FSIP1Q8NA03 581 aa24.33■■□□□ 1.49
SMARCA2-227ENST00000634760 PRAG1Q86YV5 1406 aa24.33■■□□□ 1.49
SMARCA2-227ENST00000634760 POLR3AO14802 1390 aaPredicted RBP24.33■■□□□ 1.49
SMARCA2-227ENST00000634760 GSTO1P78417 241 aa24.33■■□□□ 1.49
SMARCA2-227ENST00000634760 CCDC102AQ96A19 550 aa24.33■■□□□ 1.49
SMARCA2-227ENST00000634760 ZFYVE9O95405 1425 aa24.33■■□□□ 1.49
SMARCA2-227ENST00000634760 EXOC5O00471 708 aa24.33■■□□□ 1.49
SMARCA2-227ENST00000634760 PDE4BQ07343 736 aa24.33■■□□□ 1.48
SMARCA2-227ENST00000634760 CRACR2AQ9BSW2 395 aa24.33■■□□□ 1.48
SMARCA2-227ENST00000634760 ALDH1L1O75891 902 aa24.32■■□□□ 1.48
SMARCA2-227ENST00000634760 PIBF1Q8WXW3 757 aa24.32■■□□□ 1.48
SMARCA2-227ENST00000634760 FBXO31Q5XUX0 539 aaPredicted RBP24.32■■□□□ 1.48
SMARCA2-227ENST00000634760 PPP4R3BQ5MIZ7 849 aa24.32■■□□□ 1.48
SMARCA2-227ENST00000634760 CALML4Q96GE6 196 aa24.32■■□□□ 1.48
SMARCA2-227ENST00000634760 BMP15O95972 392 aa24.31■■□□□ 1.48
SMARCA2-227ENST00000634760 IARSP41252 1262 aaKnown RBP24.31■■□□□ 1.48
SMARCA2-227ENST00000634760 CFAP43Q8NDM7 1665 aa24.31■■□□□ 1.48
SMARCA2-227ENST00000634760 BAG3O95817 575 aa24.31■■□□□ 1.48
SMARCA2-227ENST00000634760 ZNF518AQ6AHZ1 1483 aa24.31■■□□□ 1.48
SMARCA2-227ENST00000634760 SHANK2Q9UPX8 1470 aa24.31■■□□□ 1.48
SMARCA2-227ENST00000634760 CCDC150Q8NCX0 1101 aa24.3■■□□□ 1.48
SMARCA2-227ENST00000634760 STXBP4Q6ZWJ1 553 aa24.3■■□□□ 1.48
SMARCA2-227ENST00000634760 SOS1Q07889 1333 aaPredicted RBP24.3■■□□□ 1.48
SMARCA2-227ENST00000634760 A2MP01023 1474 aa24.3■■□□□ 1.48
SMARCA2-227ENST00000634760 PPIP5K1Q6PFW1 1433 aa24.3■■□□□ 1.48
SMARCA2-227ENST00000634760 ANKRD24Q8TF21 1146 aa24.3■■□□□ 1.48
SMARCA2-227ENST00000634760 CCDC96Q2M329 555 aa24.3■■□□□ 1.48
SMARCA2-227ENST00000634760 TMEM67Q5HYA8 995 aa24.3■■□□□ 1.48
SMARCA2-227ENST00000634760 PARD3Q8TEW0 1356 aa24.29■■□□□ 1.48
SMARCA2-227ENST00000634760 KLHL40Q2TBA0 621 aa24.29■■□□□ 1.48
SMARCA2-227ENST00000634760 KRT23Q9C075 422 aa24.29■■□□□ 1.48
SMARCA2-227ENST00000634760 PPP1R1BQ9UD71 204 aaPredicted RBP24.29■■□□□ 1.48
SMARCA2-227ENST00000634760 MFSD6Q6ZSS7 791 aa24.29■■□□□ 1.48
SMARCA2-227ENST00000634760 CENPHQ9H3R5 247 aa24.29■■□□□ 1.48
SMARCA2-227ENST00000634760 GOLIM4O00461 696 aa24.29■■□□□ 1.48
SMARCA2-227ENST00000634760 FAM193AP78312 1265 aa24.29■■□□□ 1.48
SMARCA2-227ENST00000634760 USP16Q9Y5T5 823 aa24.29■■□□□ 1.48
SMARCA2-227ENST00000634760 MAPKBP1O60336 1514 aa24.28■■□□□ 1.48
SMARCA2-227ENST00000634760 ARHGEF12Q9NZN5 1544 aa24.28■■□□□ 1.48
SMARCA2-227ENST00000634760 TCP11L1Q9NUJ3 509 aa24.28■■□□□ 1.48
SMARCA2-227ENST00000634760 RMND1Q9NWS8 449 aa24.28■■□□□ 1.48
SMARCA2-227ENST00000634760 FBXO3Q9UK99 471 aa24.28■■□□□ 1.48
SMARCA2-227ENST00000634760 ANKRD62A6NC57 917 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms